RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 TANGO6Q9C0B7 1094 aa16.84■□□□□ 0.29
CCHCR1-222ENST00000507459 VCPKMTQ9H867 229 aa16.84■□□□□ 0.29
CCHCR1-222ENST00000507459 DIAPH3Q9NSV4 1193 aa16.84■□□□□ 0.29
CCHCR1-222ENST00000507459 MORF4L1Q9UBU8 362 aa16.84■□□□□ 0.29
CCHCR1-222ENST00000507459 FLT3LGP49771 235 aa16.83■□□□□ 0.28
CCHCR1-222ENST00000507459 Q3C1V9 767 aa16.83■□□□□ 0.28
CCHCR1-222ENST00000507459 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.28
CCHCR1-222ENST00000507459 CCDC171Q6TFL3 1326 aa16.83■□□□□ 0.28
CCHCR1-222ENST00000507459 CCAR1Q8IX12 1150 aaKnown RBP16.83■□□□□ 0.28
CCHCR1-222ENST00000507459 GTF3C2Q8WUA4 911 aaPredicted RBP16.83■□□□□ 0.28
CCHCR1-222ENST00000507459 INCENPQ9NQS7 918 aa16.83■□□□□ 0.28
CCHCR1-222ENST00000507459 BIN2Q9UBW5 565 aaPredicted RBP16.83■□□□□ 0.28
CCHCR1-222ENST00000507459 FGAP02671 866 aa16.82■□□□□ 0.28
CCHCR1-222ENST00000507459 TSPY3P0CV98 308 aa16.82■□□□□ 0.28
CCHCR1-222ENST00000507459 TSPY8P0CW00 308 aa16.82■□□□□ 0.28
CCHCR1-222ENST00000507459 HSPD1P10809 573 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-222ENST00000507459 ERVK-9P63128 1117 aa16.82■□□□□ 0.28
CCHCR1-222ENST00000507459 ERVK-24P63145 666 aa16.82■□□□□ 0.28
CCHCR1-222ENST00000507459 FAM47AQ5JRC9 791 aa16.82■□□□□ 0.28
CCHCR1-222ENST00000507459 TTC22Q5TAA0 569 aa16.82■□□□□ 0.28
CCHCR1-222ENST00000507459 POTEEQ6S8J3 1075 aa16.82■□□□□ 0.28
CCHCR1-222ENST00000507459 LPAR1Q92633 364 aa16.82■□□□□ 0.28
CCHCR1-222ENST00000507459 ZNF333Q96JL9 665 aa16.82■□□□□ 0.28
CCHCR1-222ENST00000507459 GOPCQ9HD26 462 aa16.82■□□□□ 0.28
CCHCR1-222ENST00000507459 DOCK3Q8IZD9 2030 aa16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 SPDYE16A6NNV3 312 aaPredicted RBP16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 HIP1O00291 1037 aa16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 GSPT1P15170 499 aaKnown RBP16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 GRK4P32298 578 aa16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 RGS19P49795 217 aa16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 MFAP1P55081 439 aaKnown RBP16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 TFAP4Q01664 338 aa16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 MLLT1Q03111 559 aaPredicted RBP16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 COG2Q14746 738 aa16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 ALX1Q15699 326 aa16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 TMEM106CQ9BVX2 250 aa16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 CWC22Q9HCG8 908 aaKnown RBP16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 HOXC10Q9NYD6 342 aa16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 CLIP2Q9UDT6 1046 aa16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 RABGAP1Q9Y3P9 1069 aa16.81■□□□□ 0.28
CCHCR1-222ENST00000507459 POTEFA5A3E0 1075 aa16.8■□□□□ 0.28
CCHCR1-222ENST00000507459 ADCY3O60266 1144 aa16.8■□□□□ 0.28
CCHCR1-222ENST00000507459 CNMDO75829 334 aa16.8■□□□□ 0.28
CCHCR1-222ENST00000507459 FLOT1O75955 427 aa16.8■□□□□ 0.28
CCHCR1-222ENST00000507459 CEP95Q96GE4 821 aa16.8■□□□□ 0.28
CCHCR1-222ENST00000507459 PORCNQ9H237 461 aa16.8■□□□□ 0.28
CCHCR1-222ENST00000507459 TOMM22Q9NS69 142 aa16.8■□□□□ 0.28
CCHCR1-222ENST00000507459 NYAP2Q9P242 653 aa16.8■□□□□ 0.28
CCHCR1-222ENST00000507459 WDR46O15213 610 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-222ENST00000507459 ELNP15502 786 aa16.79■□□□□ 0.28
CCHCR1-222ENST00000507459 HAND2P61296 217 aa16.79■□□□□ 0.28
CCHCR1-222ENST00000507459 WDR78Q5VTH9 848 aa16.79■□□□□ 0.28
CCHCR1-222ENST00000507459 NEDD1Q8NHV4 660 aa16.79■□□□□ 0.28
CCHCR1-222ENST00000507459 MTMR4Q9NYA4 1195 aa16.79■□□□□ 0.28
CCHCR1-222ENST00000507459 BTBD7Q9P203 1132 aa16.79■□□□□ 0.28
CCHCR1-222ENST00000507459 ANAPC4Q9UJX5 808 aa16.79■□□□□ 0.28
CCHCR1-222ENST00000507459 TACC3Q9Y6A5 838 aa16.79■□□□□ 0.28
CCHCR1-222ENST00000507459 IGKV6D-41A0A0C4DH26 115 aa16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 TSPY2A6NKD2 308 aa16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 RANBP6O60518 1105 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 MAPK4P31152 587 aa16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 DSG3P32926 999 aa16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 CCNA1P78396 465 aa16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 MTFR1Q15390 333 aa16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 RRP12Q5JTH9 1297 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 FAM83BQ5T0W9 1011 aa16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 LBX2Q6XYB7 198 aa16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 LRRC47Q8N1G4 583 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 SLAIN1Q8ND83 568 aa16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 NUP88Q99567 741 aaPredicted RBP16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 GJD2Q9UKL4 321 aa16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 KIAA0100Q14667 2235 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 GREB1LQ9C091 1923 aaPredicted RBP16.78■□□□□ 0.28
CCHCR1-222ENST00000507459 F5H6K3 240 aa16.77■□□□□ 0.28
CCHCR1-222ENST00000507459 TTLL1O95922 423 aa16.77■□□□□ 0.28
CCHCR1-222ENST00000507459 CYP2B6P20813 491 aa16.77■□□□□ 0.28
CCHCR1-222ENST00000507459 UBXN2AP68543 259 aa16.77■□□□□ 0.28
CCHCR1-222ENST00000507459 KLRC3Q07444 240 aa16.77■□□□□ 0.28
CCHCR1-222ENST00000507459 IRF5Q13568 498 aa16.77■□□□□ 0.28
CCHCR1-222ENST00000507459 PLS1Q14651 629 aa16.77■□□□□ 0.28
CCHCR1-222ENST00000507459 GPR142Q7Z601 462 aa16.77■□□□□ 0.28
CCHCR1-222ENST00000507459 PLEKHH3Q7Z736 793 aa16.77■□□□□ 0.28
CCHCR1-222ENST00000507459 ATG4CQ96DT6 458 aa16.77■□□□□ 0.28
CCHCR1-222ENST00000507459 NUDT12Q9BQG2 462 aa16.77■□□□□ 0.28
CCHCR1-222ENST00000507459 FBXO28Q9NVF7 368 aa16.77■□□□□ 0.28
CCHCR1-222ENST00000507459 NDUFB10O96000 172 aa16.76■□□□□ 0.27
CCHCR1-222ENST00000507459 EN2P19622 333 aaPredicted RBP16.76■□□□□ 0.27
CCHCR1-222ENST00000507459 PXYLP1Q8TE99 480 aa16.76■□□□□ 0.27
CCHCR1-222ENST00000507459 CHMP4CQ96CF2 233 aa16.76■□□□□ 0.27
CCHCR1-222ENST00000507459 ZMYM6O95789 1325 aa16.75■□□□□ 0.27
CCHCR1-222ENST00000507459 BRCA2P51587 3418 aa16.75■□□□□ 0.27
CCHCR1-222ENST00000507459 NMT2O60551 498 aa16.75■□□□□ 0.27
CCHCR1-222ENST00000507459 INHAP05111 366 aa16.75■□□□□ 0.27
CCHCR1-222ENST00000507459 CCL5P13501 91 aa16.75■□□□□ 0.27
CCHCR1-222ENST00000507459 CENPQQ7L2Z9 268 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-222ENST00000507459 MKL1Q969V6 931 aa16.75■□□□□ 0.27
CCHCR1-222ENST00000507459 SPATC1LQ9H0A9 340 aa16.75■□□□□ 0.27
CCHCR1-222ENST00000507459 IL25Q9H293 177 aa16.75■□□□□ 0.27
CCHCR1-222ENST00000507459 ISY1Q9ULR0 285 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms