RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SLC12A7Q9Y666 1083 aa16.61■□□□□ 0.25
RNF4-208ENST00000507247 ZHX2Q9Y6X8 837 aa16.61■□□□□ 0.25
RNF4-208ENST00000507247 SPDYE5A6NIY4 337 aa16.6■□□□□ 0.25
RNF4-208ENST00000507247 UNCXA6NJT0 531 aa16.6■□□□□ 0.25
RNF4-208ENST00000507247 GOLGA8BA8MQT2 603 aa16.6■□□□□ 0.25
RNF4-208ENST00000507247 MCM2P49736 904 aa16.6■□□□□ 0.25
RNF4-208ENST00000507247 ST3GAL1Q11201 340 aa16.6■□□□□ 0.25
RNF4-208ENST00000507247 TROAPQ12815 778 aa16.6■□□□□ 0.25
RNF4-208ENST00000507247 KIAA1755Q5JYT7 1200 aa16.6■□□□□ 0.25
RNF4-208ENST00000507247 MICU3Q86XE3 530 aa16.6■□□□□ 0.25
RNF4-208ENST00000507247 JMYQ8N9B5 988 aa16.6■□□□□ 0.25
RNF4-208ENST00000507247 AS3MTQ9HBK9 375 aa16.6■□□□□ 0.25
RNF4-208ENST00000507247 NAP1L2Q9ULW6 460 aaPredicted RBP16.6■□□□□ 0.25
RNF4-208ENST00000507247 MTMR7Q9Y216 660 aa16.6■□□□□ 0.25
RNF4-208ENST00000507247 TMX2Q9Y320 296 aa16.6■□□□□ 0.25
RNF4-208ENST00000507247 AFG3L2Q9Y4W6 797 aa16.6■□□□□ 0.25
RNF4-208ENST00000507247 LOC285556D6RIA3 1793 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 ZBTB43O43298 467 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 DDAH1O94760 285 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 GJA5P36382 358 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 HUNKP57058 714 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 SPP2Q13103 211 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 STK3Q13188 491 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 DGKZQ13574 1117 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 ZYXQ15942 572 aaKnown RBP16.59■□□□□ 0.25
RNF4-208ENST00000507247 CATIPQ7Z7H3 387 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 ERO1BQ86YB8 467 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 HSCBQ8IWL3 235 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 CCDC144CPQ8IYA2 1237 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 ZNF280CQ8ND82 737 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 NUP133Q8WUM0 1156 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 CHMP4CQ96CF2 233 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 OPTNQ96CV9 577 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 OTUD5Q96G74 571 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 ZNF274Q96GC6 653 aaPredicted RBP16.59■□□□□ 0.25
RNF4-208ENST00000507247 TMX3Q96JJ7 454 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 SYNPO2Q9UMS6 1093 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 NID2Q14112 1375 aa16.59■□□□□ 0.25
RNF4-208ENST00000507247 TRIM75PA6NK02 468 aa16.58■□□□□ 0.24
RNF4-208ENST00000507247 K7ELQ4 463 aaPredicted RBP16.58■□□□□ 0.24
RNF4-208ENST00000507247 ANP32AP39687 249 aaKnown RBP16.58■□□□□ 0.24
RNF4-208ENST00000507247 CCT2P78371 535 aaKnown RBP16.58■□□□□ 0.24
RNF4-208ENST00000507247 PPATQ06203 517 aa16.58■□□□□ 0.24
RNF4-208ENST00000507247 MTMR2Q13614 643 aa16.58■□□□□ 0.24
RNF4-208ENST00000507247 SYNE3Q6ZMZ3 975 aa16.58■□□□□ 0.24
RNF4-208ENST00000507247 SAPCD2Q86UD0 394 aa16.58■□□□□ 0.24
RNF4-208ENST00000507247 NECAB1Q8N987 351 aa16.58■□□□□ 0.24
RNF4-208ENST00000507247 GMCL1P1Q8NEA9 526 aa16.58■□□□□ 0.24
RNF4-208ENST00000507247 SLC10A4Q96EP9 437 aa16.58■□□□□ 0.24
RNF4-208ENST00000507247 ZSCAN31Q96LW9 406 aaPredicted RBP16.58■□□□□ 0.24
RNF4-208ENST00000507247 FEZ1Q99689 392 aa16.58■□□□□ 0.24
RNF4-208ENST00000507247 KIAA1683Q9H0B3 1180 aa16.58■□□□□ 0.24
RNF4-208ENST00000507247 VCPKMTQ9H867 229 aa16.58■□□□□ 0.24
RNF4-208ENST00000507247 FAM217BQ9NTX9 383 aaPredicted RBP16.58■□□□□ 0.24
RNF4-208ENST00000507247 TLL2Q9Y6L7 1015 aa16.58■□□□□ 0.24
RNF4-208ENST00000507247 PARP14Q460N5 1801 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 TMEM88BA6NKF7 163 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 GOLGA8AA7E2F4 631 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 USP17L10C9JJH3 530 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 F5H6K3 240 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 IRF6O14896 467 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 PFKFB2O60825 505 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 NDUFB10O96000 172 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 SNHG28P0DPA3 235 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 PDHBP11177 359 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 CDC27P30260 824 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 METAP2P50579 478 aaKnown RBP eCLIP16.57■□□□□ 0.24
RNF4-208ENST00000507247 RCAN1P53805 252 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 BACE1P56817 501 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 KLRC3Q07444 240 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 SCRN1Q12765 414 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 PPIL2Q13356 520 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 GRM4Q14833 912 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 SLFN13Q68D06 897 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 SH2D4AQ9H788 454 aa16.57■□□□□ 0.24
RNF4-208ENST00000507247 NCOA5Q9HCD5 579 aaKnown RBP16.57■□□□□ 0.24
RNF4-208ENST00000507247 SH2B1Q9NRF2 756 aaPredicted RBP16.57■□□□□ 0.24
RNF4-208ENST00000507247 RAD21O60216 631 aa16.56■□□□□ 0.24
RNF4-208ENST00000507247 CALM1P0DP23 149 aa16.56■□□□□ 0.24
RNF4-208ENST00000507247 CALM2P0DP24 149 aa16.56■□□□□ 0.24
RNF4-208ENST00000507247 CALM3P0DP25 149 aa16.56■□□□□ 0.24
RNF4-208ENST00000507247 USP17L2Q6R6M4 530 aa16.56■□□□□ 0.24
RNF4-208ENST00000507247 SPICE1Q8N0Z3 855 aa16.56■□□□□ 0.24
RNF4-208ENST00000507247 STAG2Q8N3U4 1231 aa16.56■□□□□ 0.24
RNF4-208ENST00000507247 FANCBQ8NB91 859 aa16.56■□□□□ 0.24
RNF4-208ENST00000507247 GTF3C6Q969F1 213 aa16.56■□□□□ 0.24
RNF4-208ENST00000507247 WNK4Q96J92 1243 aa16.56■□□□□ 0.24
RNF4-208ENST00000507247 SLKQ9H2G2 1235 aaPredicted RBP16.56■□□□□ 0.24
RNF4-208ENST00000507247 GOPCQ9HD26 462 aa16.56■□□□□ 0.24
RNF4-208ENST00000507247 EMILIN3Q9NT22 766 aa16.56■□□□□ 0.24
RNF4-208ENST00000507247 MAD2L2Q9UI95 211 aa16.56■□□□□ 0.24
RNF4-208ENST00000507247 KCNH4Q9UQ05 1017 aa16.56■□□□□ 0.24
RNF4-208ENST00000507247 MYH6P13533 1939 aa16.55■□□□□ 0.24
RNF4-208ENST00000507247 FRMPD2Q68DX3 1309 aaPredicted RBP16.55■□□□□ 0.24
RNF4-208ENST00000507247 HMGCS2P54868 508 aa16.55■□□□□ 0.24
RNF4-208ENST00000507247 RTN1Q16799 776 aa16.55■□□□□ 0.24
RNF4-208ENST00000507247 SH3D19Q5HYK7 790 aa16.55■□□□□ 0.24
RNF4-208ENST00000507247 RASAL3Q86YV0 1011 aa16.55■□□□□ 0.24
RNF4-208ENST00000507247 CCDC83Q8IWF9 413 aa16.55■□□□□ 0.24
RNF4-208ENST00000507247 DCAF4Q8WV16 495 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 298.7 ms