RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 HIRAP54198 1017 aaPredicted RBP11.69□□□□□ -0.54
CLCN3-205ENST00000506924 CHAF1AQ13111 956 aaPredicted RBP11.69□□□□□ -0.54
CLCN3-205ENST00000506924 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.69□□□□□ -0.54
CLCN3-205ENST00000506924 CAVIN4Q5BKX8 364 aa11.69□□□□□ -0.54
CLCN3-205ENST00000506924 STRIP1Q5VSL9 837 aa11.69□□□□□ -0.54
CLCN3-205ENST00000506924 MAP1SQ66K74 1059 aaPredicted RBP11.69□□□□□ -0.54
CLCN3-205ENST00000506924 LYSMD3Q7Z3D4 306 aa11.69□□□□□ -0.54
CLCN3-205ENST00000506924 FBXO33Q7Z6M2 555 aa11.69□□□□□ -0.54
CLCN3-205ENST00000506924 SIRT2Q8IXJ6 389 aa11.69□□□□□ -0.54
CLCN3-205ENST00000506924 RHBDD1Q8TEB9 315 aa11.69□□□□□ -0.54
CLCN3-205ENST00000506924 LPIN2Q92539 896 aa11.69□□□□□ -0.54
CLCN3-205ENST00000506924 ADARB2Q9NS39 739 aaKnown RBP11.69□□□□□ -0.54
CLCN3-205ENST00000506924 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
CLCN3-205ENST00000506924 PSME4Q14997 1843 aa11.69□□□□□ -0.54
CLCN3-205ENST00000506924 IGFBP4P22692 258 aa11.68□□□□□ -0.54
CLCN3-205ENST00000506924 GNASQ5JWF2 1037 aa11.68□□□□□ -0.54
CLCN3-205ENST00000506924 PNMA8AQ86V59 439 aaPredicted RBP11.68□□□□□ -0.54
CLCN3-205ENST00000506924 KIAA0825Q8IV33 1275 aa11.68□□□□□ -0.54
CLCN3-205ENST00000506924 CERS5Q8N5B7 392 aa11.68□□□□□ -0.54
CLCN3-205ENST00000506924 SMC1BQ8NDV3 1235 aa11.68□□□□□ -0.54
CLCN3-205ENST00000506924 TDRD7Q8NHU6 1098 aaKnown RBP11.68□□□□□ -0.54
CLCN3-205ENST00000506924 NEUROD6Q96NK8 337 aa11.68□□□□□ -0.54
CLCN3-205ENST00000506924 HINFPQ9BQA5 517 aa11.68□□□□□ -0.54
CLCN3-205ENST00000506924 ZNF646O15015 1829 aaPredicted RBP11.67□□□□□ -0.54
CLCN3-205ENST00000506924 A0A1B0GUL7 405 aa11.67□□□□□ -0.54
CLCN3-205ENST00000506924 RPS12P25398 132 aaKnown RBP11.67□□□□□ -0.54
CLCN3-205ENST00000506924 WEE1P30291 646 aa11.67□□□□□ -0.54
CLCN3-205ENST00000506924 PHKA1P46020 1223 aa11.67□□□□□ -0.54
CLCN3-205ENST00000506924 TMEM214Q6NUQ4 689 aaKnown RBP11.67□□□□□ -0.54
CLCN3-205ENST00000506924 USP50Q70EL3 339 aaPredicted RBP11.67□□□□□ -0.54
CLCN3-205ENST00000506924 LDHDQ86WU2 507 aa11.67□□□□□ -0.54
CLCN3-205ENST00000506924 TNS4Q8IZW8 715 aa11.67□□□□□ -0.54
CLCN3-205ENST00000506924 AGBL3Q8NEM8 1001 aa11.67□□□□□ -0.54
CLCN3-205ENST00000506924 DPF2Q92785 391 aa11.67□□□□□ -0.54
CLCN3-205ENST00000506924 GMLQ99445 158 aa11.67□□□□□ -0.54
CLCN3-205ENST00000506924 CHMP4BQ9H444 224 aaKnown RBP11.67□□□□□ -0.54
CLCN3-205ENST00000506924 ASTN2O75129 1339 aaPredicted RBP11.66□□□□□ -0.54
CLCN3-205ENST00000506924 PSMA6P60900 246 aaKnown RBP11.66□□□□□ -0.54
CLCN3-205ENST00000506924 IRX6P78412 446 aaPredicted RBP11.66□□□□□ -0.54
CLCN3-205ENST00000506924 HTRA3P83110 453 aa11.66□□□□□ -0.54
CLCN3-205ENST00000506924 FMR1Q06787 632 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLCN3-205ENST00000506924 GRIK5Q16478 980 aa11.66□□□□□ -0.54
CLCN3-205ENST00000506924 KIF4BQ2VIQ3 1234 aa11.66□□□□□ -0.54
CLCN3-205ENST00000506924 B4GALNT3Q6L9W6 998 aa11.66□□□□□ -0.54
CLCN3-205ENST00000506924 SLC9A9Q8IVB4 645 aa11.66□□□□□ -0.54
CLCN3-205ENST00000506924 RPAP2Q8IXW5 612 aaPredicted RBP11.66□□□□□ -0.54
CLCN3-205ENST00000506924 ZNF295-AS1Q8N0V1 137 aa11.66□□□□□ -0.54
CLCN3-205ENST00000506924 NIFKQ9BYG3 293 aaKnown RBP11.66□□□□□ -0.54
CLCN3-205ENST00000506924 GMPR2Q9P2T1 348 aaKnown RBP11.66□□□□□ -0.54
CLCN3-205ENST00000506924 DNMT3LQ9UJW3 386 aa11.66□□□□□ -0.54
CLCN3-205ENST00000506924 SCAF8Q9UPN6 1271 aaKnown RBP11.66□□□□□ -0.54
CLCN3-205ENST00000506924 AKAP2Q9Y2D5 859 aa11.66□□□□□ -0.54
CLCN3-205ENST00000506924 MAN1A2O60476 641 aa11.65□□□□□ -0.54
CLCN3-205ENST00000506924 FSTL1Q12841 308 aa11.65□□□□□ -0.54
CLCN3-205ENST00000506924 MFSD14BQ5SR56 506 aa11.65□□□□□ -0.54
CLCN3-205ENST00000506924 DLK2Q6UY11 383 aa11.65□□□□□ -0.54
CLCN3-205ENST00000506924 TAS1R3Q7RTX0 852 aa11.65□□□□□ -0.54
CLCN3-205ENST00000506924 CNTROBQ8N137 903 aa11.65□□□□□ -0.54
CLCN3-205ENST00000506924 MYOZ2Q9NPC6 264 aa11.65□□□□□ -0.54
CLCN3-205ENST00000506924 NOP58Q9Y2X3 529 aaKnown RBP11.65□□□□□ -0.54
CLCN3-205ENST00000506924 PCDHAC2Q9Y5I4 1007 aa11.65□□□□□ -0.54
CLCN3-205ENST00000506924 ADAMTSL1Q8N6G6 1762 aa11.64□□□□□ -0.55
CLCN3-205ENST00000506924 FAM205AQ6ZU69 1335 aa11.64□□□□□ -0.55
CLCN3-205ENST00000506924 ZNF609O15014 1411 aa11.64□□□□□ -0.55
CLCN3-205ENST00000506924 TRAF5O00463 557 aa11.64□□□□□ -0.55
CLCN3-205ENST00000506924 HMMRO75330 724 aa11.64□□□□□ -0.55
CLCN3-205ENST00000506924 ZNF280AP59817 542 aaPredicted RBP11.64□□□□□ -0.55
CLCN3-205ENST00000506924 TEAD4Q15561 434 aa11.64□□□□□ -0.55
CLCN3-205ENST00000506924 TNNI3KQ59H18 835 aa11.64□□□□□ -0.55
CLCN3-205ENST00000506924 GORABQ5T7V8 394 aa11.64□□□□□ -0.55
CLCN3-205ENST00000506924 HOMEZQ8IX15 550 aa11.64□□□□□ -0.55
CLCN3-205ENST00000506924 C1orf216Q8TAB5 229 aa11.64□□□□□ -0.55
CLCN3-205ENST00000506924 CCDC8Q9H0W5 538 aaPredicted RBP11.64□□□□□ -0.55
CLCN3-205ENST00000506924 TSPAN10Q9H1Z9 355 aaPredicted RBP11.64□□□□□ -0.55
CLCN3-205ENST00000506924 IL1RAPL2Q9NP60 686 aa11.64□□□□□ -0.55
CLCN3-205ENST00000506924 FPGT-TNNI3KV9GXZ4 949 aa11.64□□□□□ -0.55
CLCN3-205ENST00000506924 COL1A1P02452 1464 aaPredicted RBP11.63□□□□□ -0.55
CLCN3-205ENST00000506924 MYO3BQ8WXR4 1341 aa11.63□□□□□ -0.55
CLCN3-205ENST00000506924 OCLNQ16625 522 aa11.63□□□□□ -0.55
CLCN3-205ENST00000506924 NBPF9Q3BBW0 867 aa11.63□□□□□ -0.55
CLCN3-205ENST00000506924 EXOC6Q8TAG9 804 aa11.63□□□□□ -0.55
CLCN3-205ENST00000506924 DBNDD2Q9BQY9 259 aa11.63□□□□□ -0.55
CLCN3-205ENST00000506924 TRAIPQ9BWF2 469 aa11.63□□□□□ -0.55
CLCN3-205ENST00000506924 GLIS2Q9BZE0 524 aaPredicted RBP11.63□□□□□ -0.55
CLCN3-205ENST00000506924 GNL3LQ9NVN8 582 aaKnown RBP11.63□□□□□ -0.55
CLCN3-205ENST00000506924 TLR7Q9NYK1 1049 aaKnown RBP11.63□□□□□ -0.55
CLCN3-205ENST00000506924 TTF2Q9UNY4 1162 aaKnown RBP11.63□□□□□ -0.55
CLCN3-205ENST00000506924 ARAP2Q8WZ64 1704 aa11.63□□□□□ -0.55
CLCN3-205ENST00000506924 MYH13Q9UKX3 1938 aa11.62□□□□□ -0.55
CLCN3-205ENST00000506924 HSPA6P17066 643 aa11.62□□□□□ -0.55
CLCN3-205ENST00000506924 RBM5P52756 815 aaKnown RBP eCLIP11.62□□□□□ -0.55
CLCN3-205ENST00000506924 RASGRF1Q13972 1273 aa11.62□□□□□ -0.55
CLCN3-205ENST00000506924 ANGEL2Q5VTE6 544 aaKnown RBP11.62□□□□□ -0.55
CLCN3-205ENST00000506924 PI16Q6UXB8 463 aa11.62□□□□□ -0.55
CLCN3-205ENST00000506924 USP48Q86UV5 1035 aa11.62□□□□□ -0.55
CLCN3-205ENST00000506924 RHPN1Q8TCX5 695 aa11.62□□□□□ -0.55
CLCN3-205ENST00000506924 EAF2Q96CJ1 260 aaPredicted RBP11.62□□□□□ -0.55
CLCN3-205ENST00000506924 GGA3Q9NZ52 723 aa11.62□□□□□ -0.55
CLCN3-205ENST00000506924 HDAC9Q9UKV0 1011 aa11.62□□□□□ -0.55
CLCN3-205ENST00000506924 POLR2AP24928 1970 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms