RNA–Protein interactions for RNA: ENST00000506787.5

UBE2B-205, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-205ENST00000506787 PROCA1Q8NCQ7 364 aaPredicted RBP12.75□□□□□ -0.37
UBE2B-205ENST00000506787 USP6NLQ92738 828 aa12.75□□□□□ -0.37
UBE2B-205ENST00000506787 RUNDC1Q96C34 613 aa12.75□□□□□ -0.37
UBE2B-205ENST00000506787 NUDT12Q9BQG2 462 aa12.75□□□□□ -0.37
UBE2B-205ENST00000506787 PUS3Q9BZE2 481 aaKnown RBP12.75□□□□□ -0.37
UBE2B-205ENST00000506787 MORF4L1Q9UBU8 362 aa12.75□□□□□ -0.37
UBE2B-205ENST00000506787 ATP11BQ9Y2G3 1177 aa12.75□□□□□ -0.37
UBE2B-205ENST00000506787 GTF3C3Q9Y5Q9 886 aa12.75□□□□□ -0.37
UBE2B-205ENST00000506787 DOCK1Q14185 1865 aa12.74□□□□□ -0.37
UBE2B-205ENST00000506787 FRAT2O75474 233 aaPredicted RBP12.74□□□□□ -0.37
UBE2B-205ENST00000506787 MORN1Q5T089 497 aa12.74□□□□□ -0.37
UBE2B-205ENST00000506787 SH3BP5LQ7L8J4 393 aa12.74□□□□□ -0.37
UBE2B-205ENST00000506787 TRMT44Q8IYL2 757 aaKnown RBP12.74□□□□□ -0.37
UBE2B-205ENST00000506787 TRMT2AQ8IZ69 625 aaKnown RBP12.74□□□□□ -0.37
UBE2B-205ENST00000506787 LINS1Q8NG48 757 aa12.74□□□□□ -0.37
UBE2B-205ENST00000506787 SOCS4Q8WXH5 440 aa12.74□□□□□ -0.37
UBE2B-205ENST00000506787 THAP11Q96EK4 314 aa12.74□□□□□ -0.37
UBE2B-205ENST00000506787 ASCC2Q9H1I8 757 aaPredicted RBP12.74□□□□□ -0.37
UBE2B-205ENST00000506787 ZNF576Q9H609 170 aa12.74□□□□□ -0.37
UBE2B-205ENST00000506787 PRDM5Q9NQX1 630 aaPredicted RBP12.74□□□□□ -0.37
UBE2B-205ENST00000506787 DOCK2Q92608 1830 aa12.74□□□□□ -0.37
UBE2B-205ENST00000506787 LOC285556D6RIA3 1793 aa12.74□□□□□ -0.37
UBE2B-205ENST00000506787 TCF20Q9UGU0 1960 aaKnown RBP12.73□□□□□ -0.37
UBE2B-205ENST00000506787 RLFQ13129 1914 aa12.73□□□□□ -0.37
UBE2B-205ENST00000506787 TRIM43BA6NCK2 446 aa12.73□□□□□ -0.37
UBE2B-205ENST00000506787 APAF1O14727 1248 aa12.73□□□□□ -0.37
UBE2B-205ENST00000506787 CTNND1O60716 968 aaKnown RBP12.73□□□□□ -0.37
UBE2B-205ENST00000506787 EPHB4P54760 987 aa12.73□□□□□ -0.37
UBE2B-205ENST00000506787 GNAI1P63096 354 aa12.73□□□□□ -0.37
UBE2B-205ENST00000506787 DIXDC1Q155Q3 683 aa12.73□□□□□ -0.37
UBE2B-205ENST00000506787 AKNAD1Q5T1N1 836 aa12.73□□□□□ -0.37
UBE2B-205ENST00000506787 SH3RF1Q7Z6J0 888 aa12.73□□□□□ -0.37
UBE2B-205ENST00000506787 KCNV2Q8TDN2 545 aa12.73□□□□□ -0.37
UBE2B-205ENST00000506787 TRIM43Q96BQ3 446 aaPredicted RBP12.73□□□□□ -0.37
UBE2B-205ENST00000506787 RNPC3Q96LT9 517 aaKnown RBP12.73□□□□□ -0.37
UBE2B-205ENST00000506787 PDLIM7Q9NR12 457 aa12.73□□□□□ -0.37
UBE2B-205ENST00000506787 LRRFIP2Q9Y608 721 aaKnown RBP12.73□□□□□ -0.37
UBE2B-205ENST00000506787 MYO9BQ13459 2157 aa12.73□□□□□ -0.37
UBE2B-205ENST00000506787 TTC24A2A3L6 582 aaPredicted RBP12.72□□□□□ -0.37
UBE2B-205ENST00000506787 DNM1LO00429 736 aa12.72□□□□□ -0.37
UBE2B-205ENST00000506787 ITGB8P26012 769 aa12.72□□□□□ -0.37
UBE2B-205ENST00000506787 CCDC27Q2M243 656 aa12.72□□□□□ -0.37
UBE2B-205ENST00000506787 METTL3Q86U44 580 aaKnown RBP12.72□□□□□ -0.37
UBE2B-205ENST00000506787 DNAAF4Q8WXU2 420 aa12.72□□□□□ -0.37
UBE2B-205ENST00000506787 CHMP4AQ9BY43 222 aa12.72□□□□□ -0.37
UBE2B-205ENST00000506787 EPHX3Q9H6B9 360 aa12.72□□□□□ -0.37
UBE2B-205ENST00000506787 TXNRD2Q9NNW7 524 aa12.72□□□□□ -0.37
UBE2B-205ENST00000506787 TRANK1O15050 2925 aa12.72□□□□□ -0.37
UBE2B-205ENST00000506787 BMP1P13497 986 aa12.71□□□□□ -0.37
UBE2B-205ENST00000506787 HMGCS2P54868 508 aa12.71□□□□□ -0.37
UBE2B-205ENST00000506787 SPP2Q13103 211 aa12.71□□□□□ -0.37
UBE2B-205ENST00000506787 CAVIN4Q5BKX8 364 aa12.71□□□□□ -0.37
UBE2B-205ENST00000506787 SLC39A5Q6ZMH5 540 aa12.71□□□□□ -0.37
UBE2B-205ENST00000506787 LPAR1Q92633 364 aa12.71□□□□□ -0.37
UBE2B-205ENST00000506787 TIFAQ96CG3 184 aa12.71□□□□□ -0.37
UBE2B-205ENST00000506787 GAS2L1Q99501 681 aaPredicted RBP12.71□□□□□ -0.37
UBE2B-205ENST00000506787 STK31Q9BXU1 1019 aa12.71□□□□□ -0.37
UBE2B-205ENST00000506787 USP40Q9NVE5 1235 aa12.71□□□□□ -0.37
UBE2B-205ENST00000506787 DDX20Q9UHI6 824 aaKnown RBP12.71□□□□□ -0.37
UBE2B-205ENST00000506787 DDTLA6NHG4 134 aaPredicted RBP12.7□□□□□ -0.38
UBE2B-205ENST00000506787 RGS2P41220 211 aa12.7□□□□□ -0.38
UBE2B-205ENST00000506787 RGS3P49796 1198 aa12.7□□□□□ -0.38
UBE2B-205ENST00000506787 FLIIQ13045 1269 aa12.7□□□□□ -0.38
UBE2B-205ENST00000506787 PABPC4Q13310 644 aaKnown RBP eCLIP12.7□□□□□ -0.382e-6■□□□□ 9.2
UBE2B-205ENST00000506787 ADGRE1Q14246 886 aa12.7□□□□□ -0.38
UBE2B-205ENST00000506787 SNX17Q15036 470 aa12.7□□□□□ -0.38
UBE2B-205ENST00000506787 CCDC85BQ15834 202 aaPredicted RBP12.7□□□□□ -0.38
UBE2B-205ENST00000506787 TRIM60Q495X7 471 aa12.7□□□□□ -0.38
UBE2B-205ENST00000506787 FAM160A2Q8N612 972 aaPredicted RBP12.7□□□□□ -0.38
UBE2B-205ENST00000506787 IL27Q8NEV9 243 aa12.7□□□□□ -0.38
UBE2B-205ENST00000506787 APBA2Q99767 749 aa12.7□□□□□ -0.38
UBE2B-205ENST00000506787 PORCNQ9H237 461 aa12.7□□□□□ -0.38
UBE2B-205ENST00000506787 FLRT1Q9NZU1 646 aa12.7□□□□□ -0.38
UBE2B-205ENST00000506787 SALL2Q9Y467 1007 aaPredicted RBP12.7□□□□□ -0.38
UBE2B-205ENST00000506787 USP34Q70CQ2 3546 aa12.7□□□□□ -0.38
UBE2B-205ENST00000506787 RFX7Q2KHR2 1363 aa12.69□□□□□ -0.38
UBE2B-205ENST00000506787 MROH5Q6ZUA9 1318 aa12.69□□□□□ -0.38
UBE2B-205ENST00000506787 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.69□□□□□ -0.38
UBE2B-205ENST00000506787 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.69□□□□□ -0.38
UBE2B-205ENST00000506787 ZBTB24O43167 697 aaPredicted RBP12.69□□□□□ -0.38
UBE2B-205ENST00000506787 ENTPD3O75355 529 aa12.69□□□□□ -0.38
UBE2B-205ENST00000506787 SLFN5Q08AF3 891 aa12.69□□□□□ -0.38
UBE2B-205ENST00000506787 Q3C1V9 767 aa12.69□□□□□ -0.38
UBE2B-205ENST00000506787 GJC2Q5T442 439 aaPredicted RBP12.69□□□□□ -0.38
UBE2B-205ENST00000506787 VGLL2Q8N8G2 317 aa12.69□□□□□ -0.38
UBE2B-205ENST00000506787 ZNF280CQ8ND82 737 aa12.69□□□□□ -0.38
UBE2B-205ENST00000506787 IDI2Q9BXS1 227 aa12.69□□□□□ -0.38
UBE2B-205ENST00000506787 PRDM12Q9H4Q4 367 aa12.69□□□□□ -0.38
UBE2B-205ENST00000506787 C11orf16Q9NQ32 467 aa12.69□□□□□ -0.38
UBE2B-205ENST00000506787 CFAP54Q96N23 3096 aa12.69□□□□□ -0.38
UBE2B-205ENST00000506787 PRDX5P30044 214 aa12.68□□□□□ -0.38
UBE2B-205ENST00000506787 MAPK4P31152 587 aa12.68□□□□□ -0.38
UBE2B-205ENST00000506787 FUT2Q10981 343 aa12.68□□□□□ -0.38
UBE2B-205ENST00000506787 FKBP5Q13451 457 aaPredicted RBP12.68□□□□□ -0.38
UBE2B-205ENST00000506787 SH3D19Q5HYK7 790 aa12.68□□□□□ -0.38
UBE2B-205ENST00000506787 TMEM31Q5JXX7 168 aa12.68□□□□□ -0.38
UBE2B-205ENST00000506787 GPR142Q7Z601 462 aa12.68□□□□□ -0.38
UBE2B-205ENST00000506787 RDH13Q8NBN7 331 aa12.68□□□□□ -0.38
UBE2B-205ENST00000506787 GPRC5AQ8NFJ5 357 aa12.68□□□□□ -0.38
UBE2B-205ENST00000506787 P2RX7Q99572 595 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms