RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 VWCEQ96DN2 955 aa4.95□□□□□ -1.62
TOPBP1-205ENST00000506779 IRS4O14654 1257 aaPredicted RBP4.94□□□□□ -1.62
TOPBP1-205ENST00000506779 LRIG2O94898 1065 aa4.94□□□□□ -1.62
TOPBP1-205ENST00000506779 BMP6P22004 513 aa4.94□□□□□ -1.62
TOPBP1-205ENST00000506779 NTF4P34130 210 aa4.94□□□□□ -1.62
TOPBP1-205ENST00000506779 PCNX4Q63HM2 1172 aa4.94□□□□□ -1.62
TOPBP1-205ENST00000506779 ALG1LQ6GMV1 187 aa4.94□□□□□ -1.62
TOPBP1-205ENST00000506779 HOMEZQ8IX15 550 aa4.94□□□□□ -1.62
TOPBP1-205ENST00000506779 TMEFF1Q8IYR6 380 aa4.94□□□□□ -1.62
TOPBP1-205ENST00000506779 ZNF507Q8TCN5 953 aa4.94□□□□□ -1.62
TOPBP1-205ENST00000506779 CACNA2D2Q9NY47 1150 aa4.94□□□□□ -1.62
TOPBP1-205ENST00000506779 SPG7Q9UQ90 795 aa4.94□□□□□ -1.62
TOPBP1-205ENST00000506779 GNEQ9Y223 722 aaKnown RBP4.94□□□□□ -1.62
TOPBP1-205ENST00000506779 TNFRSF18Q9Y5U5 241 aa4.94□□□□□ -1.62
TOPBP1-205ENST00000506779 GIPC1O14908 333 aa4.93□□□□□ -1.62
TOPBP1-205ENST00000506779 BRD1O95696 1058 aa4.93□□□□□ -1.62
TOPBP1-205ENST00000506779 CELA3AP09093 270 aa4.93□□□□□ -1.62
TOPBP1-205ENST00000506779 SFRP5Q5T4F7 317 aa4.93□□□□□ -1.62
TOPBP1-205ENST00000506779 SCARA3Q6AZY7 606 aa4.93□□□□□ -1.62
TOPBP1-205ENST00000506779 TMPRSS7Q7RTY8 843 aa4.93□□□□□ -1.62
TOPBP1-205ENST00000506779 FERMT3Q86UX7 667 aa4.93□□□□□ -1.62
TOPBP1-205ENST00000506779 FAM129CQ86XR2 697 aa4.93□□□□□ -1.62
TOPBP1-205ENST00000506779 OXR1Q8N573 874 aa4.93□□□□□ -1.62
TOPBP1-205ENST00000506779 MIPEPQ99797 713 aa4.93□□□□□ -1.62
TOPBP1-205ENST00000506779 C1QTNF3Q9BXJ4 246 aa4.93□□□□□ -1.62
TOPBP1-205ENST00000506779 OSBPL7Q9BZF2 842 aa4.93□□□□□ -1.62
TOPBP1-205ENST00000506779 SIRT5Q9NXA8 310 aa4.93□□□□□ -1.62
TOPBP1-205ENST00000506779 USP17L7P0C7H9 530 aa4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 ZNF20P17024 532 aa4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 LMNB1P20700 586 aa4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 KCNC1P48547 511 aa4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 ETF1P62495 437 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 RING1Q06587 406 aa4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 FMR1Q06787 632 aaKnown RBP eCLIP4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 NR0B2Q15466 257 aa4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 RASIP1Q5U651 963 aa4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 ZNF746Q6NUN9 644 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 LRFN4Q6PJG9 635 aa4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 HDXQ7Z353 690 aa4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 ZNF575Q86XF7 245 aa4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 SETDB2Q96T68 719 aa4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 CNTD2Q9H8S5 307 aa4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 CYP8B1Q9UNU6 501 aa4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 TTF2Q9UNY4 1162 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-205ENST00000506779 FITM1A5D6W6 292 aa4.91□□□□□ -1.62
TOPBP1-205ENST00000506779 SLITRK5O94991 958 aa4.91□□□□□ -1.62
TOPBP1-205ENST00000506779 RGS19P49795 217 aa4.91□□□□□ -1.62
TOPBP1-205ENST00000506779 WIPI1Q5MNZ9 446 aaPredicted RBP4.91□□□□□ -1.62
TOPBP1-205ENST00000506779 CRIP3Q6Q6R5 217 aa4.91□□□□□ -1.62
TOPBP1-205ENST00000506779 PLPPR2Q96GM1 343 aa4.91□□□□□ -1.62
TOPBP1-205ENST00000506779 PCED1AQ9H1Q7 454 aa4.91□□□□□ -1.62
TOPBP1-205ENST00000506779 C12orf49Q9H741 205 aa4.91□□□□□ -1.62
TOPBP1-205ENST00000506779 FAM8A1Q9UBU6 413 aa4.91□□□□□ -1.62
TOPBP1-205ENST00000506779 OR14I1A6ND48 311 aa4.9□□□□□ -1.63
TOPBP1-205ENST00000506779 CBX7O95931 251 aa4.9□□□□□ -1.63
TOPBP1-205ENST00000506779 ITGB3P05106 788 aa4.9□□□□□ -1.63
TOPBP1-205ENST00000506779 ZGLP1P0C6A0 271 aa4.9□□□□□ -1.63
TOPBP1-205ENST00000506779 INPP5AQ14642 412 aa4.9□□□□□ -1.63
TOPBP1-205ENST00000506779 MFSD2AQ8NA29 543 aa4.9□□□□□ -1.63
TOPBP1-205ENST00000506779 PWWP2AQ96N64 755 aa4.9□□□□□ -1.63
TOPBP1-205ENST00000506779 FBRSQ9HAH7 460 aa4.9□□□□□ -1.63
TOPBP1-205ENST00000506779 HRKO00198 91 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 FZD7O75084 574 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 SLURP1P55000 103 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 SNX17Q15036 470 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 TTBK2Q6IQ55 1244 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 LETMD1Q6P1Q0 360 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 USP51Q70EK9 711 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 CREG2Q8IUH2 290 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 HID1Q8IV36 788 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 ANKRD24Q8TF21 1146 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 XAGE3Q8WTP9 111 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 PPP1R13LQ8WUF5 828 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 ASB16Q96NS5 453 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 WNT10AQ9GZT5 417 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 WWC3Q9ULE0 1092 aa4.89□□□□□ -1.63
TOPBP1-205ENST00000506779 CYP7A1P22680 504 aa4.88□□□□□ -1.63
TOPBP1-205ENST00000506779 PTPN11Q06124 597 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-205ENST00000506779 SLBPQ14493 270 aaKnown RBP eCLIP4.88□□□□□ -1.63
TOPBP1-205ENST00000506779 NKG7Q16617 165 aa4.88□□□□□ -1.63
TOPBP1-205ENST00000506779 PRAMEF13Q5VWM6 474 aa4.88□□□□□ -1.63
TOPBP1-205ENST00000506779 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-205ENST00000506779 SV2BQ7L1I2 683 aa4.88□□□□□ -1.63
TOPBP1-205ENST00000506779 GAL3ST3Q96A11 431 aa4.88□□□□□ -1.63
TOPBP1-205ENST00000506779 SHISA4Q96DD7 197 aa4.88□□□□□ -1.63
TOPBP1-205ENST00000506779 GPR160Q9UJ42 338 aa4.88□□□□□ -1.63
TOPBP1-205ENST00000506779 SNCAIPQ9Y6H5 919 aa4.88□□□□□ -1.63
TOPBP1-205ENST00000506779 PDIA4P13667 645 aaKnown RBP4.87□□□□□ -1.63
TOPBP1-205ENST00000506779 GRK4P32298 578 aa4.87□□□□□ -1.63
TOPBP1-205ENST00000506779 CAP2P40123 477 aa4.87□□□□□ -1.63
TOPBP1-205ENST00000506779 GALK1P51570 392 aa4.87□□□□□ -1.63
TOPBP1-205ENST00000506779 KCNA1Q09470 495 aa4.87□□□□□ -1.63
TOPBP1-205ENST00000506779 CCDC85BQ15834 202 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-205ENST00000506779 SPRED1Q7Z699 444 aa4.87□□□□□ -1.63
TOPBP1-205ENST00000506779 COX4I2Q96KJ9 171 aa4.87□□□□□ -1.63
TOPBP1-205ENST00000506779 C8orf49Q96NF6 230 aa4.87□□□□□ -1.63
TOPBP1-205ENST00000506779 C11orf21Q9P2W6 132 aa4.87□□□□□ -1.63
TOPBP1-205ENST00000506779 IVNS1ABPQ9Y6Y0 642 aa4.87□□□□□ -1.63
TOPBP1-205ENST00000506779 WASH4PA8MWX3 477 aa4.86□□□□□ -1.63
TOPBP1-205ENST00000506779 FFAR3O14843 346 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms