RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 ZCCHC17Q9NP64 241 aaKnown RBP17.04■□□□□ 0.32
HERC6-206ENST00000506714 AFMP43652 599 aa17.04■□□□□ 0.32
HERC6-206ENST00000506714 IRX5P78411 483 aaPredicted RBP17.04■□□□□ 0.32
HERC6-206ENST00000506714 ZNF569Q5MCW4 686 aa17.04■□□□□ 0.32
HERC6-206ENST00000506714 KLHL10Q6JEL2 608 aa17.04■□□□□ 0.32
HERC6-206ENST00000506714 BARGINQ6ZT62 677 aa17.04■□□□□ 0.32
HERC6-206ENST00000506714 CPLX3Q8WVH0 158 aa17.04■□□□□ 0.32
HERC6-206ENST00000506714 ERVV-1B6SEH8 477 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 PPP1R3GB7ZBB8 358 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 CD44P16070 742 aaKnown RBP17.03■□□□□ 0.32
HERC6-206ENST00000506714 ST5P78524 1137 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 SPAG1Q07617 926 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 TRIM14Q14142 442 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 KIF4BQ2VIQ3 1234 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 LCORLQ8N3X6 602 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 ESR2Q92731 530 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 PHF20Q9BVI0 1012 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 GBP3Q9H0R5 595 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 BRMS1Q9HCU9 246 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.03■□□□□ 0.32
HERC6-206ENST00000506714 BCL9LQ86UU0 1499 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 MYH13Q9UKX3 1938 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 A0A0G2JS52 829 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 LRRC10BA6NIK2 292 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 PRPF3O43395 683 aaKnown RBP17.03■□□□□ 0.32
HERC6-206ENST00000506714 PRKAB2O43741 272 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 EIF3JO75822 258 aaKnown RBP17.03■□□□□ 0.32
HERC6-206ENST00000506714 CASP14P31944 242 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 CMTR1Q8N1G2 835 aaKnown RBP17.03■□□□□ 0.32
HERC6-206ENST00000506714 NEK11Q8NG66 645 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 SYMPKQ92797 1274 aaKnown RBP17.03■□□□□ 0.32
HERC6-206ENST00000506714 EPSTI1Q96J88 318 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 ANKZF1Q9H8Y5 726 aa17.03■□□□□ 0.32
HERC6-206ENST00000506714 CWC15Q9P013 229 aaKnown RBP17.03■□□□□ 0.32
HERC6-206ENST00000506714 STX17P56962 302 aa17.02■□□□□ 0.32
HERC6-206ENST00000506714 PPARAQ07869 468 aa17.02■□□□□ 0.32
HERC6-206ENST00000506714 WHAMMP3Q1A5X7 153 aa17.02■□□□□ 0.32
HERC6-206ENST00000506714 BEND6Q5SZJ8 279 aaPredicted RBP17.02■□□□□ 0.32
HERC6-206ENST00000506714 ANKRD20A12PQ8NF67 263 aa17.02■□□□□ 0.32
HERC6-206ENST00000506714 HELBQ8NG08 1087 aaPredicted RBP17.02■□□□□ 0.32
HERC6-206ENST00000506714 RBM28Q9NW13 759 aaKnown RBP17.02■□□□□ 0.32
HERC6-206ENST00000506714 LIMA1Q9UHB6 759 aaKnown RBP17.02■□□□□ 0.32
HERC6-206ENST00000506714 ANAPC4Q9UJX5 808 aa17.02■□□□□ 0.32
HERC6-206ENST00000506714 ADAM21Q9UKJ8 722 aa17.02■□□□□ 0.32
HERC6-206ENST00000506714 A0A087X0B3 334 aa17.01■□□□□ 0.31
HERC6-206ENST00000506714 GYPCP04921 128 aa17.01■□□□□ 0.31
HERC6-206ENST00000506714 SLC20A2Q08357 652 aa17.01■□□□□ 0.31
HERC6-206ENST00000506714 SEC23AQ15436 765 aa17.01■□□□□ 0.31
HERC6-206ENST00000506714 NAPGQ99747 312 aaPredicted RBP17.01■□□□□ 0.31
HERC6-206ENST00000506714 CYP26C1Q6V0L0 522 aa17.01■□□□□ 0.31
HERC6-206ENST00000506714 ZSWIM4Q9H7M6 989 aa17.01■□□□□ 0.31
HERC6-206ENST00000506714 PUF60Q9UHX1 559 aaKnown RBP17.01■□□□□ 0.31
HERC6-206ENST00000506714 TNKSO95271 1327 aa17■□□□□ 0.31
HERC6-206ENST00000506714 VPS72Q15906 364 aa17■□□□□ 0.31
HERC6-206ENST00000506714 PKN1Q16512 942 aa17■□□□□ 0.31
HERC6-206ENST00000506714 FAM98CQ17RN3 349 aaKnown RBP17■□□□□ 0.31
HERC6-206ENST00000506714 IQUBQ8NA54 791 aa17■□□□□ 0.31
HERC6-206ENST00000506714 CTAGE15A4D2H0 777 aa17■□□□□ 0.31
HERC6-206ENST00000506714 CTAGE8P0CG41 777 aa17■□□□□ 0.31
HERC6-206ENST00000506714 CALM1P0DP23 149 aa17■□□□□ 0.31
HERC6-206ENST00000506714 CALM2P0DP24 149 aa17■□□□□ 0.31
HERC6-206ENST00000506714 CALM3P0DP25 149 aa17■□□□□ 0.31
HERC6-206ENST00000506714 CYP19A1P11511 503 aaPredicted RBP17■□□□□ 0.31
HERC6-206ENST00000506714 ZSCAN26Q16670 478 aa17■□□□□ 0.31
HERC6-206ENST00000506714 CTAGE6Q86UF2 777 aa17■□□□□ 0.31
HERC6-206ENST00000506714 CTAGE4Q8IX94 777 aa17■□□□□ 0.31
HERC6-206ENST00000506714 MARCH10Q8NA82 808 aaPredicted RBP17■□□□□ 0.31
HERC6-206ENST00000506714 GOLGA5Q8TBA6 731 aa17■□□□□ 0.31
HERC6-206ENST00000506714 TMEM51Q9NW97 253 aa17■□□□□ 0.31
HERC6-206ENST00000506714 VPS54Q9P1Q0 977 aa17■□□□□ 0.31
HERC6-206ENST00000506714 RWDD2AQ9UIY3 292 aa17■□□□□ 0.31
HERC6-206ENST00000506714 DLEC1Q9Y238 1755 aa17■□□□□ 0.31
HERC6-206ENST00000506714 N4BP3O15049 544 aa16.99■□□□□ 0.31
HERC6-206ENST00000506714 FXR1P51114 621 aaKnown RBP eCLIP16.99■□□□□ 0.31
HERC6-206ENST00000506714 CATIPQ7Z7H3 387 aa16.99■□□□□ 0.31
HERC6-206ENST00000506714 ZNF34Q8IZ26 560 aa16.99■□□□□ 0.31
HERC6-206ENST00000506714 SLC35F6Q8N357 371 aa16.99■□□□□ 0.31
HERC6-206ENST00000506714 ABHD10Q9NUJ1 306 aa16.99■□□□□ 0.31
HERC6-206ENST00000506714 LRP2BPQ9P2M1 347 aa16.99■□□□□ 0.31
HERC6-206ENST00000506714 L1RE1Q9UN81 338 aa16.99■□□□□ 0.31
HERC6-206ENST00000506714 IQSEC3Q9UPP2 1182 aaPredicted RBP16.99■□□□□ 0.31
HERC6-206ENST00000506714 KRT31Q15323 416 aa16.99■□□□□ 0.31
HERC6-206ENST00000506714 MEX3CQ5U5Q3 659 aaKnown RBP16.99■□□□□ 0.31
HERC6-206ENST00000506714 FNBP4Q8N3X1 1017 aaPredicted RBP16.99■□□□□ 0.31
HERC6-206ENST00000506714 CTNND2Q9UQB3 1225 aa16.99■□□□□ 0.31
HERC6-206ENST00000506714 H3BQF6 201 aa16.98■□□□□ 0.31
HERC6-206ENST00000506714 HSPA1LP34931 641 aa16.98■□□□□ 0.31
HERC6-206ENST00000506714 ATP2C1P98194 919 aaPredicted RBP16.98■□□□□ 0.31
HERC6-206ENST00000506714 RAD51AP2Q09MP3 1159 aa16.98■□□□□ 0.31
HERC6-206ENST00000506714 FUT2Q10981 343 aa16.98■□□□□ 0.31
HERC6-206ENST00000506714 TTC38Q5R3I4 469 aa16.98■□□□□ 0.31
HERC6-206ENST00000506714 PPP4R3CPQ6ZMV5 832 aa16.98■□□□□ 0.31
HERC6-206ENST00000506714 ACSBG1Q96GR2 724 aa16.98■□□□□ 0.31
HERC6-206ENST00000506714 ZSCAN10Q96SZ4 725 aaPredicted RBP16.98■□□□□ 0.31
HERC6-206ENST00000506714 ACBD3Q9H3P7 528 aa16.98■□□□□ 0.31
HERC6-206ENST00000506714 RMND1Q9NWS8 449 aa16.98■□□□□ 0.31
HERC6-206ENST00000506714 USP21Q9UK80 565 aa16.98■□□□□ 0.31
HERC6-206ENST00000506714 FAM205CA6NFA0 338 aa16.98■□□□□ 0.31
HERC6-206ENST00000506714 PCP11498 1178 aaKnown RBP16.98■□□□□ 0.31
HERC6-206ENST00000506714 TRAPPC10P48553 1259 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms