RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 FKBP1AP62942 108 aaKnown RBP25.48■■□□□ 1.67
RNF4-207ENST00000506706 ZRSR1Q15695 479 aaKnown RBP25.48■■□□□ 1.67
RNF4-207ENST00000506706 LZTS2Q9BRK4 669 aa25.48■■□□□ 1.67
RNF4-207ENST00000506706 MORC2Q9Y6X9 1032 aaPredicted RBP25.48■■□□□ 1.67
RNF4-207ENST00000506706 STRIP1Q5VSL9 837 aa25.48■■□□□ 1.67
RNF4-207ENST00000506706 DDX4Q9NQI0 724 aaKnown RBP25.48■■□□□ 1.67
RNF4-207ENST00000506706 SH3GLB2Q9NR46 395 aa25.48■■□□□ 1.67
RNF4-207ENST00000506706 PALM3A6NDB9 673 aaPredicted RBP25.47■■□□□ 1.67
RNF4-207ENST00000506706 FAM205CA6NFA0 338 aa25.47■■□□□ 1.67
RNF4-207ENST00000506706 IQCB1Q15051 598 aa25.47■■□□□ 1.67
RNF4-207ENST00000506706 EARS2Q5JPH6 523 aaKnown RBP25.47■■□□□ 1.67
RNF4-207ENST00000506706 ZNF579Q8NAF0 562 aaKnown RBP25.47■■□□□ 1.67
RNF4-207ENST00000506706 KCNH3Q9ULD8 1083 aa25.47■■□□□ 1.67
RNF4-207ENST00000506706 SRPRBQ9Y5M8 271 aaKnown RBP25.47■■□□□ 1.67
RNF4-207ENST00000506706 TOP1P11387 765 aaKnown RBP25.46■■□□□ 1.67
RNF4-207ENST00000506706 CALML3P27482 149 aa25.46■■□□□ 1.67
RNF4-207ENST00000506706 GABPAQ06546 454 aa25.46■■□□□ 1.67
RNF4-207ENST00000506706 APOBEC3HQ6NTF7 200 aaKnown RBP25.46■■□□□ 1.67
RNF4-207ENST00000506706 CDC42EP5Q6NZY7 148 aa25.46■■□□□ 1.67
RNF4-207ENST00000506706 CEP57L1Q8IYX8 460 aa25.46■■□□□ 1.67
RNF4-207ENST00000506706 NAT10Q9H0A0 1025 aaKnown RBP25.46■■□□□ 1.67
RNF4-207ENST00000506706 KCNQ5Q9NR82 932 aa25.46■■□□□ 1.67
RNF4-207ENST00000506706 FAM13BQ9NYF5 915 aa25.46■■□□□ 1.67
RNF4-207ENST00000506706 ZKSCAN5Q9Y2L8 839 aa25.46■■□□□ 1.67
RNF4-207ENST00000506706 BAZ2BQ9UIF8 2168 aaKnown RBP25.46■■□□□ 1.67
RNF4-207ENST00000506706 GOLGA6L19H0YKK7 550 aa25.46■■□□□ 1.67
RNF4-207ENST00000506706 ECE2O60344 883 aa25.46■■□□□ 1.67
RNF4-207ENST00000506706 CRKP46108 304 aa25.46■■□□□ 1.67
RNF4-207ENST00000506706 CEP95Q96GE4 821 aa25.46■■□□□ 1.67
RNF4-207ENST00000506706 MRIQ9BWK5 157 aa25.46■■□□□ 1.67
RNF4-207ENST00000506706 MTMR7Q9Y216 660 aa25.46■■□□□ 1.67
RNF4-207ENST00000506706 ADAMTSL1Q8N6G6 1762 aa25.45■■□□□ 1.67
RNF4-207ENST00000506706 BMP15O95972 392 aa25.45■■□□□ 1.66
RNF4-207ENST00000506706 NOVP48745 357 aa25.45■■□□□ 1.66
RNF4-207ENST00000506706 CC2D2BQ6DHV5 1058 aa25.45■■□□□ 1.66
RNF4-207ENST00000506706 C7orf43Q8WVR3 580 aa25.45■■□□□ 1.66
RNF4-207ENST00000506706 SWAP70Q9UH65 585 aa25.45■■□□□ 1.66
RNF4-207ENST00000506706 PLIN4Q96Q06 1357 aa25.45■■□□□ 1.66
RNF4-207ENST00000506706 VEGFAP15692 232 aaPredicted RBP25.44■■□□□ 1.66
RNF4-207ENST00000506706 ZDHHC15Q96MV8 337 aa25.44■■□□□ 1.66
RNF4-207ENST00000506706 OSBPL5Q9H0X9 879 aaPredicted RBP25.44■■□□□ 1.66
RNF4-207ENST00000506706 A0A087WWV3 80 aa25.44■■□□□ 1.66
RNF4-207ENST00000506706 DACT2Q5SW24 774 aa25.44■■□□□ 1.66
RNF4-207ENST00000506706 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.44■■□□□ 1.66
RNF4-207ENST00000506706 PARP1P09874 1014 aaKnown RBP25.43■■□□□ 1.66
RNF4-207ENST00000506706 GRIN1Q05586 938 aa25.43■■□□□ 1.66
RNF4-207ENST00000506706 SERPINB13Q9UIV8 391 aa25.43■■□□□ 1.66
RNF4-207ENST00000506706 BECN2A8MW95 431 aa25.43■■□□□ 1.66
RNF4-207ENST00000506706 KLRF2D3W0D1 207 aa25.43■■□□□ 1.66
RNF4-207ENST00000506706 CYTH3O43739 400 aa25.43■■□□□ 1.66
RNF4-207ENST00000506706 SPECC1Q5M775 1068 aa25.43■■□□□ 1.66
RNF4-207ENST00000506706 TRAPPC10P48553 1259 aa25.42■■□□□ 1.66
RNF4-207ENST00000506706 NLRP12P59046 1061 aa25.42■■□□□ 1.66
RNF4-207ENST00000506706 HDLBPQ00341 1268 aaKnown RBP25.42■■□□□ 1.66
RNF4-207ENST00000506706 SLC35G1Q2M3R5 365 aa25.42■■□□□ 1.66
RNF4-207ENST00000506706 TTC38Q5R3I4 469 aa25.42■■□□□ 1.66
RNF4-207ENST00000506706 KRBA2Q6ZNG9 492 aa25.42■■□□□ 1.66
RNF4-207ENST00000506706 KIAA0825Q8IV33 1275 aa25.42■■□□□ 1.66
RNF4-207ENST00000506706 ELOA2Q8IYF1 753 aaPredicted RBP25.42■■□□□ 1.66
RNF4-207ENST00000506706 BLIDQ8IZY5 108 aa25.42■■□□□ 1.66
RNF4-207ENST00000506706 CNNM3Q8NE01 707 aa25.42■■□□□ 1.66
RNF4-207ENST00000506706 SUPT20HQ8NEM7 779 aa25.42■■□□□ 1.66
RNF4-207ENST00000506706 GPKOWQ92917 476 aaPredicted RBP eCLIP25.42■■□□□ 1.66
RNF4-207ENST00000506706 SPZ1Q9BXG8 430 aa25.42■■□□□ 1.66
RNF4-207ENST00000506706 MYH8P13535 1937 aa25.42■■□□□ 1.66
RNF4-207ENST00000506706 MYO3BQ8WXR4 1341 aa25.42■■□□□ 1.66
RNF4-207ENST00000506706 HLA-DOAP06340 250 aa25.41■■□□□ 1.66
RNF4-207ENST00000506706 LONRF3Q496Y0 759 aa25.41■■□□□ 1.66
RNF4-207ENST00000506706 NOM1Q5C9Z4 860 aaKnown RBP25.41■■□□□ 1.66
RNF4-207ENST00000506706 CCDC148Q8NFR7 591 aa25.41■■□□□ 1.66
RNF4-207ENST00000506706 PCDHA4Q9UN74 947 aa25.41■■□□□ 1.66
RNF4-207ENST00000506706 GOLGA8HP0CJ92 632 aa25.41■■□□□ 1.66
RNF4-207ENST00000506706 AOC3Q16853 763 aa25.41■■□□□ 1.66
RNF4-207ENST00000506706 PIK3AP1Q6ZUJ8 805 aa25.41■■□□□ 1.66
RNF4-207ENST00000506706 DHX40Q8IX18 779 aaKnown RBP25.41■■□□□ 1.66
RNF4-207ENST00000506706 TUBE1Q9UJT0 475 aa25.41■■□□□ 1.66
RNF4-207ENST00000506706 SCN9AQ15858 1988 aa25.41■■□□□ 1.66
RNF4-207ENST00000506706 KIAA2012Q0VF49 1180 aa25.4■■□□□ 1.66
RNF4-207ENST00000506706 SF3B2Q13435 895 aaKnown RBP25.4■■□□□ 1.66
RNF4-207ENST00000506706 FAM177A1Q8N128 213 aaPredicted RBP25.4■■□□□ 1.66
RNF4-207ENST00000506706 FERMT2Q96AC1 680 aa25.4■■□□□ 1.66
RNF4-207ENST00000506706 BPIFA3Q9BQP9 254 aa25.4■■□□□ 1.66
RNF4-207ENST00000506706 TRIM5Q9C035 493 aa25.4■■□□□ 1.66
RNF4-207ENST00000506706 CSRNP2Q9H175 543 aa25.4■■□□□ 1.66
RNF4-207ENST00000506706 MTMR4Q9NYA4 1195 aa25.4■■□□□ 1.66
RNF4-207ENST00000506706 HOOK1Q9UJC3 728 aaKnown RBP25.4■■□□□ 1.66
RNF4-207ENST00000506706 ZNF646O15015 1829 aaPredicted RBP25.4■■□□□ 1.66
RNF4-207ENST00000506706 AKR1B1P15121 316 aa25.4■■□□□ 1.66
RNF4-207ENST00000506706 SMARCA1P28370 1054 aa25.4■■□□□ 1.66
RNF4-207ENST00000506706 BAG6P46379 1132 aa25.4■■□□□ 1.66
RNF4-207ENST00000506706 GALNT17Q6IS24 598 aa25.4■■□□□ 1.66
RNF4-207ENST00000506706 GOLGA6L6A8MZA4 724 aa25.39■■□□□ 1.65
RNF4-207ENST00000506706 ZNF174Q15697 407 aa25.39■■□□□ 1.65
RNF4-207ENST00000506706 DPCR1Q3MIW9 517 aa25.39■■□□□ 1.65
RNF4-207ENST00000506706 WWC2Q6AWC2 1192 aa25.39■■□□□ 1.65
RNF4-207ENST00000506706 BARHL2Q9NY43 387 aa25.39■■□□□ 1.65
RNF4-207ENST00000506706 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.39■■□□□ 1.65
RNF4-207ENST00000506706 IGKV6D-41A0A0C4DH26 115 aa25.38■■□□□ 1.65
RNF4-207ENST00000506706 BIN1O00499 593 aa25.38■■□□□ 1.65
RNF4-207ENST00000506706 WNT7AO00755 349 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms