RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 LZTS2Q9BRK4 669 aa20.72■□□□□ 0.91
ITGA3-207ENST00000506401 UTRNP46939 3433 aa20.72■□□□□ 0.91
ITGA3-207ENST00000506401 PRPF3O43395 683 aaKnown RBP20.71■□□□□ 0.91
ITGA3-207ENST00000506401 GH2P01242 217 aa20.71■□□□□ 0.91
ITGA3-207ENST00000506401 PARP1P09874 1014 aaKnown RBP20.71■□□□□ 0.91
ITGA3-207ENST00000506401 HIRAP54198 1017 aaPredicted RBP20.71■□□□□ 0.91
ITGA3-207ENST00000506401 FUT2Q10981 343 aa20.71■□□□□ 0.91
ITGA3-207ENST00000506401 NBR1Q14596 966 aa20.71■□□□□ 0.91
ITGA3-207ENST00000506401 SEPT2Q15019 361 aa20.71■□□□□ 0.91
ITGA3-207ENST00000506401 CLEC10AQ8IUN9 316 aa20.71■□□□□ 0.91
ITGA3-207ENST00000506401 MAD2L2Q9UI95 211 aa20.71■□□□□ 0.91
ITGA3-207ENST00000506401 ICA1Q05084 483 aa20.71■□□□□ 0.91
ITGA3-207ENST00000506401 TRIM29Q14134 588 aa20.71■□□□□ 0.91
ITGA3-207ENST00000506401 LRRC47Q8N1G4 583 aaKnown RBP20.71■□□□□ 0.91
ITGA3-207ENST00000506401 SRBD1Q8N5C6 995 aaKnown RBP20.71■□□□□ 0.91
ITGA3-207ENST00000506401 FBXO18Q8NFZ0 1043 aa20.71■□□□□ 0.91
ITGA3-207ENST00000506401 MKL1Q969V6 931 aa20.71■□□□□ 0.91
ITGA3-207ENST00000506401 ZSCAN16Q9H4T2 348 aaPredicted RBP20.71■□□□□ 0.91
ITGA3-207ENST00000506401 GGA3Q9NZ52 723 aa20.71■□□□□ 0.91
ITGA3-207ENST00000506401 PALM3A6NDB9 673 aaPredicted RBP20.7■□□□□ 0.9
ITGA3-207ENST00000506401 EEF2P13639 858 aaKnown RBP20.7■□□□□ 0.9
ITGA3-207ENST00000506401 RRP1BQ14684 758 aaKnown RBP20.7■□□□□ 0.9
ITGA3-207ENST00000506401 FERMT3Q86UX7 667 aa20.7■□□□□ 0.9
ITGA3-207ENST00000506401 L3MBTL3Q96JM7 780 aaPredicted RBP20.7■□□□□ 0.9
ITGA3-207ENST00000506401 RBM27Q9P2N5 1060 aaKnown RBP20.7■□□□□ 0.9
ITGA3-207ENST00000506401 PPP2R3BQ9Y5P8 575 aa20.7■□□□□ 0.9
ITGA3-207ENST00000506401 V9GY48 417 aaPredicted RBP20.7■□□□□ 0.9
ITGA3-207ENST00000506401 POLR2AP24928 1970 aaKnown RBP20.7■□□□□ 0.9
ITGA3-207ENST00000506401 DDX11L8A8MPP1 907 aa20.69■□□□□ 0.9
ITGA3-207ENST00000506401 GUCY1A2P33402 732 aa20.69■□□□□ 0.9
ITGA3-207ENST00000506401 GUCY1B3Q02153 619 aa20.69■□□□□ 0.9
ITGA3-207ENST00000506401 SHROOM1Q2M3G4 852 aaPredicted RBP20.69■□□□□ 0.9
ITGA3-207ENST00000506401 STAG2Q8N3U4 1231 aa20.69■□□□□ 0.9
ITGA3-207ENST00000506401 PITPNM2Q9BZ72 1349 aa20.69■□□□□ 0.9
ITGA3-207ENST00000506401 GLTPD2A6NH11 291 aa20.69■□□□□ 0.9
ITGA3-207ENST00000506401 CAP2P40123 477 aa20.69■□□□□ 0.9
ITGA3-207ENST00000506401 FOXD4L6Q3SYB3 417 aaPredicted RBP20.69■□□□□ 0.9
ITGA3-207ENST00000506401 DCAF15Q66K64 600 aa20.69■□□□□ 0.9
ITGA3-207ENST00000506401 MCTP1Q6DN14 999 aa20.69■□□□□ 0.9
ITGA3-207ENST00000506401 FOXD4L3Q6VB84 417 aaPredicted RBP20.69■□□□□ 0.9
ITGA3-207ENST00000506401 BAZ2BQ9UIF8 2168 aaKnown RBP20.69■□□□□ 0.9
ITGA3-207ENST00000506401 CNTNAP5Q8WYK1 1306 aa20.69■□□□□ 0.9
ITGA3-207ENST00000506401 USP17L5A8MUK1 530 aa20.68■□□□□ 0.9
ITGA3-207ENST00000506401 KLRF2D3W0D1 207 aa20.68■□□□□ 0.9
ITGA3-207ENST00000506401 PDHBP11177 359 aa20.68■□□□□ 0.9
ITGA3-207ENST00000506401 XBP1P17861 261 aa20.68■□□□□ 0.9
ITGA3-207ENST00000506401 PTMSP20962 102 aa20.68■□□□□ 0.9
ITGA3-207ENST00000506401 USP17L2Q6R6M4 530 aa20.68■□□□□ 0.9
ITGA3-207ENST00000506401 AIFM3Q96NN9 605 aa20.68■□□□□ 0.9
ITGA3-207ENST00000506401 TCHHQ07283 1943 aa20.68■□□□□ 0.9
ITGA3-207ENST00000506401 SMARCA1P28370 1054 aa20.67■□□□□ 0.9
ITGA3-207ENST00000506401 JAG1P78504 1218 aa20.67■□□□□ 0.9
ITGA3-207ENST00000506401 ASPRV1Q53RT3 343 aa20.67■□□□□ 0.9
ITGA3-207ENST00000506401 NBPF12Q5TAG4 269 aaPredicted RBP20.67■□□□□ 0.9
ITGA3-207ENST00000506401 ZBTB21Q9ULJ3 1066 aa20.67■□□□□ 0.9
ITGA3-207ENST00000506401 GOLGA8HP0CJ92 632 aa20.67■□□□□ 0.9
ITGA3-207ENST00000506401 SNHG28P0DPA3 235 aa20.67■□□□□ 0.9
ITGA3-207ENST00000506401 RESTQ13127 1097 aa20.67■□□□□ 0.9
ITGA3-207ENST00000506401 KRT40Q6A162 431 aa20.67■□□□□ 0.9
ITGA3-207ENST00000506401 OTUD7BQ6GQQ9 843 aa20.67■□□□□ 0.9
ITGA3-207ENST00000506401 SIAH1Q8IUQ4 282 aa20.67■□□□□ 0.9
ITGA3-207ENST00000506401 DCPSQ96C86 337 aaKnown RBP20.67■□□□□ 0.9
ITGA3-207ENST00000506401 ARHGEF10LQ9HCE6 1279 aa20.67■□□□□ 0.9
ITGA3-207ENST00000506401 UBE2Q2LH0YL09 131 aa20.66■□□□□ 0.9
ITGA3-207ENST00000506401 ASNSP08243 561 aa20.66■□□□□ 0.9
ITGA3-207ENST00000506401 USP50Q70EL3 339 aaPredicted RBP20.66■□□□□ 0.9
ITGA3-207ENST00000506401 SPZ1Q9BXG8 430 aa20.66■□□□□ 0.9
ITGA3-207ENST00000506401 GINM1Q9NU53 330 aa20.66■□□□□ 0.9
ITGA3-207ENST00000506401 SYNPO2Q9UMS6 1093 aa20.66■□□□□ 0.9
ITGA3-207ENST00000506401 PHF20L1A8MW92 1017 aa20.65■□□□□ 0.9
ITGA3-207ENST00000506401 PKN1Q16512 942 aa20.65■□□□□ 0.9
ITGA3-207ENST00000506401 ZNF341Q9BYN7 854 aa20.65■□□□□ 0.9
ITGA3-207ENST00000506401 GJB4Q9NTQ9 266 aa20.65■□□□□ 0.9
ITGA3-207ENST00000506401 RAD21O60216 631 aa20.64■□□□□ 0.9
ITGA3-207ENST00000506401 EPHX2P34913 555 aa20.64■□□□□ 0.9
ITGA3-207ENST00000506401 SUPT20HL1Q3ZLR7 823 aa20.64■□□□□ 0.9
ITGA3-207ENST00000506401 GPATCH4Q5T3I0 446 aaKnown RBP20.64■□□□□ 0.9
ITGA3-207ENST00000506401 DCAF4Q8WV16 495 aa20.64■□□□□ 0.9
ITGA3-207ENST00000506401 hCG_1642624A0A1W2PR95 340 aa20.64■□□□□ 0.89
ITGA3-207ENST00000506401 IQCA1LA6NCM1 817 aa20.64■□□□□ 0.89
ITGA3-207ENST00000506401 CTNND1O60716 968 aaKnown RBP20.64■□□□□ 0.89
ITGA3-207ENST00000506401 SCG2P13521 617 aa20.64■□□□□ 0.89
ITGA3-207ENST00000506401 ZNF543Q08ER8 600 aa20.64■□□□□ 0.89
ITGA3-207ENST00000506401 SAFBQ15424 915 aaKnown RBP eCLIP20.64■□□□□ 0.89
ITGA3-207ENST00000506401 CCDC96Q2M329 555 aa20.64■□□□□ 0.89
ITGA3-207ENST00000506401 SLFN13Q68D06 897 aa20.64■□□□□ 0.89
ITGA3-207ENST00000506401 RASGRP2Q7LDG7 609 aa20.64■□□□□ 0.89
ITGA3-207ENST00000506401 SULF1Q8IWU6 871 aa20.64■□□□□ 0.89
ITGA3-207ENST00000506401 GMCL1P1Q8NEA9 526 aa20.64■□□□□ 0.89
ITGA3-207ENST00000506401 CHAMP1Q96JM3 812 aa20.64■□□□□ 0.89
ITGA3-207ENST00000506401 SCN4AP35499 1836 aa20.64■□□□□ 0.89
ITGA3-207ENST00000506401 ATAD5Q96QE3 1844 aa20.64■□□□□ 0.89
ITGA3-207ENST00000506401 FRMPD2Q68DX3 1309 aaPredicted RBP20.63■□□□□ 0.89
ITGA3-207ENST00000506401 NCLP19338 710 aaKnown RBP20.63■□□□□ 0.89
ITGA3-207ENST00000506401 DNM1Q05193 864 aaKnown RBP20.63■□□□□ 0.89
ITGA3-207ENST00000506401 GNL2Q13823 731 aaKnown RBP20.63■□□□□ 0.89
ITGA3-207ENST00000506401 PFKFB3Q16875 520 aaPredicted RBP20.63■□□□□ 0.89
ITGA3-207ENST00000506401 PIBF1Q8WXW3 757 aa20.63■□□□□ 0.89
ITGA3-207ENST00000506401 GPCPD1Q9NPB8 672 aa20.63■□□□□ 0.89
ITGA3-207ENST00000506401 F5H6K3 240 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms