RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 ZNF287Q9HBT7 754 aa21.2■□□□□ 0.98
SMN1-204ENST00000506163 HPS5Q9UPZ3 1129 aa21.2■□□□□ 0.98
SMN1-204ENST00000506163 PTPN22Q9Y2R2 807 aa21.2■□□□□ 0.98
SMN1-204ENST00000506163 DOCK3Q8IZD9 2030 aa21.19■□□□□ 0.98
SMN1-204ENST00000506163 TBC1D10CQ8IV04 446 aa21.19■□□□□ 0.98
SMN1-204ENST00000506163 DSCC1Q9BVC3 393 aa21.19■□□□□ 0.98
SMN1-204ENST00000506163 IL17RBQ9NRM6 502 aa21.19■□□□□ 0.98
SMN1-204ENST00000506163 MTMR4Q9NYA4 1195 aa21.19■□□□□ 0.98
SMN1-204ENST00000506163 NYAP2Q9P242 653 aa21.19■□□□□ 0.98
SMN1-204ENST00000506163 PLIN4Q96Q06 1357 aa21.18■□□□□ 0.98
SMN1-204ENST00000506163 ORC4O43929 436 aa21.18■□□□□ 0.98
SMN1-204ENST00000506163 NMT2O60551 498 aa21.18■□□□□ 0.98
SMN1-204ENST00000506163 GCLCP48506 637 aaPredicted RBP21.18■□□□□ 0.98
SMN1-204ENST00000506163 FAM110CQ1W6H9 321 aa21.18■□□□□ 0.98
SMN1-204ENST00000506163 Q3C1V9 767 aa21.18■□□□□ 0.98
SMN1-204ENST00000506163 CLIP2Q9UDT6 1046 aa21.18■□□□□ 0.98
SMN1-204ENST00000506163 CAPN15O75808 1086 aa21.17■□□□□ 0.98
SMN1-204ENST00000506163 CNMDO75829 334 aa21.17■□□□□ 0.98
SMN1-204ENST00000506163 TSPY3P0CV98 308 aa21.17■□□□□ 0.98
SMN1-204ENST00000506163 TSPY8P0CW00 308 aa21.17■□□□□ 0.98
SMN1-204ENST00000506163 PTH1RQ03431 593 aa21.17■□□□□ 0.98
SMN1-204ENST00000506163 MKL1Q969V6 931 aa21.17■□□□□ 0.98
SMN1-204ENST00000506163 MORF4L1Q9UBU8 362 aa21.17■□□□□ 0.98
SMN1-204ENST00000506163 RLFQ13129 1914 aa21.17■□□□□ 0.98
SMN1-204ENST00000506163 CENPFP49454 3210 aa21.17■□□□□ 0.98
SMN1-204ENST00000506163 SGSM2O43147 1006 aa21.16■□□□□ 0.98
SMN1-204ENST00000506163 FMNL1O95466 1100 aaPredicted RBP21.16■□□□□ 0.98
SMN1-204ENST00000506163 KIF22Q14807 665 aa21.16■□□□□ 0.98
SMN1-204ENST00000506163 BMP2KLQ5H9B9 411 aa21.16■□□□□ 0.98
SMN1-204ENST00000506163 LPAR1Q92633 364 aa21.16■□□□□ 0.98
SMN1-204ENST00000506163 MGAMO43451 1857 aa21.15■□□□□ 0.98
SMN1-204ENST00000506163 SPDYE16A6NNV3 312 aaPredicted RBP21.15■□□□□ 0.98
SMN1-204ENST00000506163 AKNAD1Q5T1N1 836 aa21.15■□□□□ 0.98
SMN1-204ENST00000506163 STAG1Q8WVM7 1258 aa21.15■□□□□ 0.98
SMN1-204ENST00000506163 GABRQQ9UN88 632 aa21.15■□□□□ 0.98
SMN1-204ENST00000506163 PTCH2Q9Y6C5 1203 aa21.15■□□□□ 0.98
SMN1-204ENST00000506163 RAD50Q92878 1312 aa21.15■□□□□ 0.98
SMN1-204ENST00000506163 F5H6K3 240 aa21.14■□□□□ 0.98
SMN1-204ENST00000506163 RANBP6O60518 1105 aaKnown RBP21.14■□□□□ 0.98
SMN1-204ENST00000506163 KLRC3Q07444 240 aa21.14■□□□□ 0.98
SMN1-204ENST00000506163 LBX2Q6XYB7 198 aa21.14■□□□□ 0.98
SMN1-204ENST00000506163 NUP88Q99567 741 aaPredicted RBP21.14■□□□□ 0.98
SMN1-204ENST00000506163 SH2D4AQ9H788 454 aa21.14■□□□□ 0.98
SMN1-204ENST00000506163 PPP4R2Q9NY27 417 aa21.14■□□□□ 0.98
SMN1-204ENST00000506163 BTBD7Q9P203 1132 aa21.14■□□□□ 0.98
SMN1-204ENST00000506163 SRRDQ9UH36 339 aa21.14■□□□□ 0.98
SMN1-204ENST00000506163 NEDD4P46934 1319 aa21.14■□□□□ 0.97
SMN1-204ENST00000506163 TSPY2A6NKD2 308 aa21.13■□□□□ 0.97
SMN1-204ENST00000506163 ZNF213O14771 459 aa21.13■□□□□ 0.97
SMN1-204ENST00000506163 TTLL1O95922 423 aa21.13■□□□□ 0.97
SMN1-204ENST00000506163 NDUFB10O96000 172 aa21.13■□□□□ 0.97
SMN1-204ENST00000506163 NOVP48745 357 aa21.13■□□□□ 0.97
SMN1-204ENST00000506163 FCGRTP55899 365 aa21.13■□□□□ 0.97
SMN1-204ENST00000506163 COG2Q14746 738 aa21.13■□□□□ 0.97
SMN1-204ENST00000506163 RRP12Q5JTH9 1297 aaKnown RBP21.13■□□□□ 0.97
SMN1-204ENST00000506163 LRRC47Q8N1G4 583 aaKnown RBP21.13■□□□□ 0.97
SMN1-204ENST00000506163 GPRC5AQ8NFJ5 357 aa21.13■□□□□ 0.97
SMN1-204ENST00000506163 RUFY2Q8WXA3 655 aa21.13■□□□□ 0.97
SMN1-204ENST00000506163 PAGR1Q9BTK6 254 aa21.13■□□□□ 0.97
SMN1-204ENST00000506163 TANGO6Q9C0B7 1094 aa21.13■□□□□ 0.97
SMN1-204ENST00000506163 FBXO28Q9NVF7 368 aa21.13■□□□□ 0.97
SMN1-204ENST00000506163 MYH4Q9Y623 1939 aa21.13■□□□□ 0.97
SMN1-204ENST00000506163 CCDC85CA6NKD9 419 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 WDR46O15213 610 aaKnown RBP21.12■□□□□ 0.97
SMN1-204ENST00000506163 GNRH1P01148 92 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 ERVK-9P63128 1117 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 ERVK-24P63145 666 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 PRKCZQ05513 592 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 ARHGEF6Q15052 776 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 FAM83BQ5T0W9 1011 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 ERICH6BQ5W0A0 696 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 MFSD6Q6ZSS7 791 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 PORCNQ9H237 461 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 GOPCQ9HD26 462 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 TOMM22Q9NS69 142 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 RAD21O60216 631 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 DSG3P32926 999 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 RABGAP1Q9Y3P9 1069 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 TAF6LQ9Y6J9 622 aa21.12■□□□□ 0.97
SMN1-204ENST00000506163 FLOT1O75955 427 aa21.11■□□□□ 0.97
SMN1-204ENST00000506163 ATG4CQ96DT6 458 aa21.11■□□□□ 0.97
SMN1-204ENST00000506163 HOXC10Q9NYD6 342 aa21.11■□□□□ 0.97
SMN1-204ENST00000506163 CTNNA3Q9UI47 895 aa21.11■□□□□ 0.97
SMN1-204ENST00000506163 GJD2Q9UKL4 321 aa21.11■□□□□ 0.97
SMN1-204ENST00000506163 LAMA4Q16363 1823 aa21.1■□□□□ 0.97
SMN1-204ENST00000506163 PARP14Q460N5 1801 aa21.1■□□□□ 0.97
SMN1-204ENST00000506163 TNPO2O14787 897 aaKnown RBP21.1■□□□□ 0.97
SMN1-204ENST00000506163 GTF3C2Q8WUA4 911 aaPredicted RBP21.1■□□□□ 0.97
SMN1-204ENST00000506163 ESYT1Q9BSJ8 1104 aa21.1■□□□□ 0.97
SMN1-204ENST00000506163 TCP11L1Q9NUJ3 509 aa21.1■□□□□ 0.97
SMN1-204ENST00000506163 ADAMTS5Q9UNA0 930 aa21.1■□□□□ 0.97
SMN1-204ENST00000506163 MYPNQ86TC9 1320 aa21.09■□□□□ 0.97
SMN1-204ENST00000506163 PCP11498 1178 aaKnown RBP21.09■□□□□ 0.97
SMN1-204ENST00000506163 FLT3LGP49771 235 aa21.09■□□□□ 0.97
SMN1-204ENST00000506163 IMMTQ16891 758 aaKnown RBP21.09■□□□□ 0.97
SMN1-204ENST00000506163 RCSD1Q6JBY9 416 aa21.09■□□□□ 0.97
SMN1-204ENST00000506163 RASGRP2Q7LDG7 609 aa21.09■□□□□ 0.97
SMN1-204ENST00000506163 GMCL1P1Q8NEA9 526 aa21.09■□□□□ 0.97
SMN1-204ENST00000506163 MAP4K1Q92918 833 aa21.09■□□□□ 0.97
SMN1-204ENST00000506163 CHMP4CQ96CF2 233 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms