RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 TNKSO95271 1327 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 WDR33Q9C0J8 1336 aaKnown RBP11.56□□□□□ -0.56
TRIM6-208ENST00000506134 HMGB1P09429 215 aaKnown RBP11.56□□□□□ -0.56
TRIM6-208ENST00000506134 RPS6KB1P23443 525 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 HMGCS2P54868 508 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 KIF23Q02241 960 aaPredicted RBP11.56□□□□□ -0.56
TRIM6-208ENST00000506134 CCDC178Q5BJE1 867 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 KIAA1755Q5JYT7 1200 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 RUFY3Q7L099 469 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 DGKHQ86XP1 1220 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 LRRC47Q8N1G4 583 aaKnown RBP11.56□□□□□ -0.56
TRIM6-208ENST00000506134 ENAHQ8N8S7 591 aaPredicted RBP11.56□□□□□ -0.56
TRIM6-208ENST00000506134 ANKS1AQ92625 1134 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 CHMP4CQ96CF2 233 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 IL17RAQ96F46 866 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 FEZ1Q99689 392 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 TMEM47Q9BQJ4 181 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 TBC1D2Q9BYX2 928 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 UPF3BQ9BZI7 483 aaKnown RBP11.56□□□□□ -0.56
TRIM6-208ENST00000506134 TM6SF1Q9BZW5 370 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 KIAA1683Q9H0B3 1180 aa11.56□□□□□ -0.56
TRIM6-208ENST00000506134 A0A0G2JLL6 359 aaPredicted RBP11.55□□□□□ -0.56
TRIM6-208ENST00000506134 C19orf81C9J6K1 198 aa11.55□□□□□ -0.56
TRIM6-208ENST00000506134 TOP1P11387 765 aaKnown RBP11.55□□□□□ -0.56
TRIM6-208ENST00000506134 GTF2A2P52657 109 aa11.55□□□□□ -0.56
TRIM6-208ENST00000506134 SNAPC2Q13487 334 aa11.55□□□□□ -0.56
TRIM6-208ENST00000506134 MOGSQ13724 837 aa11.55□□□□□ -0.56
TRIM6-208ENST00000506134 TMEM67Q5HYA8 995 aa11.55□□□□□ -0.56
TRIM6-208ENST00000506134 SH3D19Q5HYK7 790 aa11.55□□□□□ -0.56
TRIM6-208ENST00000506134 USP17L2Q6R6M4 530 aa11.55□□□□□ -0.56
TRIM6-208ENST00000506134 PRRT2Q7Z6L0 340 aaPredicted RBP11.55□□□□□ -0.56
TRIM6-208ENST00000506134 PIP4P2Q8N4L2 257 aa11.55□□□□□ -0.56
TRIM6-208ENST00000506134 TBC1D32Q96NH3 1257 aa11.55□□□□□ -0.56
TRIM6-208ENST00000506134 CYP46A1Q9Y6A2 500 aa11.55□□□□□ -0.56
TRIM6-208ENST00000506134 CCL15-CCL14A0A0B4J2E2 113 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 ERICH2A1L162 156 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 F5H6K3 240 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 SH2B2O14492 632 aaPredicted RBP11.54□□□□□ -0.56
TRIM6-208ENST00000506134 RAD21O60216 631 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 CETPP11597 493 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 KLRC3Q07444 240 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 NOGQ13253 232 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 WTAPQ15007 396 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 CCL15Q16663 113 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 IFIT1BQ5T764 474 aaKnown RBP11.54□□□□□ -0.56
TRIM6-208ENST00000506134 GPAT2Q6NUI2 795 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 GADL1Q6ZQY3 521 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 Q6ZUG5 572 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 SPICE1Q8N0Z3 855 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 DNAJC5GQ8N7S2 189 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 BRI3BPQ8WY22 251 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 TMEM87BQ96K49 555 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 PTPN18Q99952 460 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 LY9Q9HBG7 655 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 MTMR7Q9Y216 660 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 WDR19Q8NEZ3 1342 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 TESPA1A2RU30 521 aaPredicted RBP11.54□□□□□ -0.56
TRIM6-208ENST00000506134 MANSC4A6NHS7 340 aaPredicted RBP11.54□□□□□ -0.56
TRIM6-208ENST00000506134 USP14P54578 494 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 SART3Q15020 963 aaKnown RBP11.54□□□□□ -0.56
TRIM6-208ENST00000506134 TREML2Q5T2D2 321 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 SLFN13Q68D06 897 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 FASTKD5Q7L8L6 764 aaKnown RBP11.54□□□□□ -0.56
TRIM6-208ENST00000506134 LARP6Q9BRS8 491 aaKnown RBP11.54□□□□□ -0.56
TRIM6-208ENST00000506134 MTA3Q9BTC8 594 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 SH2D4AQ9H788 454 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 VCPKMTQ9H867 229 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 KAT14Q9H8E8 782 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 PDRG1Q9NUG6 133 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 TMOD4Q9NZQ9 345 aa11.54□□□□□ -0.56
TRIM6-208ENST00000506134 MYH4Q9Y623 1939 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 BTBD19C9JJ37 291 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 NDUFB10O96000 172 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 MAP2K2P36507 400 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 LIFRP42702 1097 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 TM4SF4P48230 202 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 NEK4P51957 841 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 INHBEP58166 350 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 NFXL1Q6ZNB6 911 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 RASGRP2Q7LDG7 609 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 TMTC2Q8N394 836 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 PNMA1Q8ND90 353 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 GMCL1P1Q8NEA9 526 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 C12orf42Q96LP6 360 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 NUP88Q99567 741 aaPredicted RBP11.53□□□□□ -0.56
TRIM6-208ENST00000506134 GOPCQ9HD26 462 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 BRPF3Q9ULD4 1205 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 SYNPO2Q9UMS6 1093 aa11.53□□□□□ -0.56
TRIM6-208ENST00000506134 IGF2BP3O00425 579 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRIM6-208ENST00000506134 VCAM1P19320 739 aa11.52□□□□□ -0.57
TRIM6-208ENST00000506134 FGD1P98174 961 aa11.52□□□□□ -0.57
TRIM6-208ENST00000506134 TOB2Q14106 344 aaPredicted RBP11.52□□□□□ -0.57
TRIM6-208ENST00000506134 FAM83BQ5T0W9 1011 aa11.52□□□□□ -0.57
TRIM6-208ENST00000506134 RAB11FIP4Q86YS3 637 aa11.52□□□□□ -0.57
TRIM6-208ENST00000506134 IFNL1Q8IU54 200 aa11.52□□□□□ -0.57
TRIM6-208ENST00000506134 FAM43AQ8N2R8 423 aa11.52□□□□□ -0.57
TRIM6-208ENST00000506134 PROCA1Q8NCQ7 364 aaPredicted RBP11.52□□□□□ -0.57
TRIM6-208ENST00000506134 BRF1Q92994 677 aa11.52□□□□□ -0.57
TRIM6-208ENST00000506134 AGXT2Q9BYV1 514 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms