RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 MAPKAPK5Q8IW41 473 aa12.97□□□□□ -0.33
NFKB1-205ENST00000505458 CNNM3Q8NE01 707 aa12.97□□□□□ -0.33
NFKB1-205ENST00000505458 DAGLAQ9Y4D2 1042 aa12.97□□□□□ -0.33
NFKB1-205ENST00000505458 H0YIN7 160 aa12.97□□□□□ -0.33
NFKB1-205ENST00000505458 OFD1O75665 1012 aa12.97□□□□□ -0.33
NFKB1-205ENST00000505458 CDK8P49336 464 aa12.97□□□□□ -0.33
NFKB1-205ENST00000505458 ARL6IP4Q66PJ3 421 aaKnown RBP12.97□□□□□ -0.33
NFKB1-205ENST00000505458 SRBD1Q8N5C6 995 aaKnown RBP12.97□□□□□ -0.33
NFKB1-205ENST00000505458 VPS54Q9P1Q0 977 aa12.97□□□□□ -0.33
NFKB1-205ENST00000505458 SNED1Q8TER0 1413 aa12.96□□□□□ -0.33
NFKB1-205ENST00000505458 HLA-DOAP06340 250 aa12.96□□□□□ -0.33
NFKB1-205ENST00000505458 TOB1P50616 345 aaPredicted RBP12.96□□□□□ -0.33
NFKB1-205ENST00000505458 GTF2IP78347 998 aa12.96□□□□□ -0.33
NFKB1-205ENST00000505458 SEMA3FQ13275 785 aa12.96□□□□□ -0.33
NFKB1-205ENST00000505458 JAG2Q9Y219 1238 aa12.96□□□□□ -0.33
NFKB1-205ENST00000505458 LAD1O00515 517 aa12.96□□□□□ -0.33
NFKB1-205ENST00000505458 SMC2O95347 1197 aa12.96□□□□□ -0.33
NFKB1-205ENST00000505458 TTC38Q5R3I4 469 aa12.96□□□□□ -0.33
NFKB1-205ENST00000505458 TNFRSF25Q93038 417 aa12.96□□□□□ -0.33
NFKB1-205ENST00000505458 TEKT1Q969V4 418 aa12.96□□□□□ -0.33
NFKB1-205ENST00000505458 CABP5Q9NP86 173 aa12.96□□□□□ -0.33
NFKB1-205ENST00000505458 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.96□□□□□ -0.33
NFKB1-205ENST00000505458 CCDC82Q8N4S0 544 aa12.96□□□□□ -0.34
NFKB1-205ENST00000505458 PIBF1Q8WXW3 757 aa12.96□□□□□ -0.34
NFKB1-205ENST00000505458 EHD4Q9H223 541 aa12.96□□□□□ -0.34
NFKB1-205ENST00000505458 PALM3A6NDB9 673 aaPredicted RBP12.95□□□□□ -0.34
NFKB1-205ENST00000505458 PCDHA4Q9UN74 947 aa12.95□□□□□ -0.34
NFKB1-205ENST00000505458 CBFA2T2O43439 604 aa12.95□□□□□ -0.34
NFKB1-205ENST00000505458 PARP1P09874 1014 aaKnown RBP12.95□□□□□ -0.34
NFKB1-205ENST00000505458 GSDMDP57764 484 aa12.95□□□□□ -0.34
NFKB1-205ENST00000505458 C11orf57Q6ZUT1 292 aaPredicted RBP12.95□□□□□ -0.34
NFKB1-205ENST00000505458 CCDC17Q96LX7 622 aa12.95□□□□□ -0.34
NFKB1-205ENST00000505458 IL17RBQ9NRM6 502 aa12.95□□□□□ -0.34
NFKB1-205ENST00000505458 STK32BQ9NY57 414 aa12.95□□□□□ -0.34
NFKB1-205ENST00000505458 NRDCO43847 1150 aa12.95□□□□□ -0.34
NFKB1-205ENST00000505458 NR5A1Q13285 461 aa12.95□□□□□ -0.34
NFKB1-205ENST00000505458 ASPRV1Q53RT3 343 aa12.95□□□□□ -0.34
NFKB1-205ENST00000505458 DRC7Q8IY82 874 aa12.95□□□□□ -0.34
NFKB1-205ENST00000505458 BLIDQ8IZY5 108 aa12.95□□□□□ -0.34
NFKB1-205ENST00000505458 DHX36Q9H2U1 1008 aaKnown RBP12.95□□□□□ -0.34
NFKB1-205ENST00000505458 IMPACTQ9P2X3 320 aa12.95□□□□□ -0.34
NFKB1-205ENST00000505458 TXLNAP40222 546 aa12.94□□□□□ -0.34
NFKB1-205ENST00000505458 ATP2C1P98194 919 aaPredicted RBP12.94□□□□□ -0.34
NFKB1-205ENST00000505458 STRIP1Q5VSL9 837 aa12.94□□□□□ -0.34
NFKB1-205ENST00000505458 C2CD5Q86YS7 1000 aa12.94□□□□□ -0.34
NFKB1-205ENST00000505458 GPR101Q96P66 508 aaPredicted RBP12.94□□□□□ -0.34
NFKB1-205ENST00000505458 TMEM47Q9BQJ4 181 aa12.94□□□□□ -0.34
NFKB1-205ENST00000505458 COL2A1P02458 1487 aaPredicted RBP12.94□□□□□ -0.34
NFKB1-205ENST00000505458 ESYT2A0FGR8 921 aa12.94□□□□□ -0.34
NFKB1-205ENST00000505458 GNA11P29992 359 aa12.94□□□□□ -0.34
NFKB1-205ENST00000505458 NT5DC1Q5TFE4 455 aa12.94□□□□□ -0.34
NFKB1-205ENST00000505458 MLKLQ8NB16 471 aa12.94□□□□□ -0.34
NFKB1-205ENST00000505458 SEC63Q9UGP8 760 aaKnown RBP12.94□□□□□ -0.34
NFKB1-205ENST00000505458 TTF2Q9UNY4 1162 aaKnown RBP12.94□□□□□ -0.34
NFKB1-205ENST00000505458 PRKCSHP14314 528 aaPredicted RBP12.93□□□□□ -0.34
NFKB1-205ENST00000505458 PPP1R18Q6NYC8 613 aa12.93□□□□□ -0.34
NFKB1-205ENST00000505458 DHX40Q8IX18 779 aaKnown RBP12.93□□□□□ -0.34
NFKB1-205ENST00000505458 DYNLL2Q96FJ2 89 aa12.93□□□□□ -0.34
NFKB1-205ENST00000505458 GTPBP4Q9BZE4 634 aaKnown RBP12.93□□□□□ -0.34
NFKB1-205ENST00000505458 MAD2L2Q9UI95 211 aa12.93□□□□□ -0.34
NFKB1-205ENST00000505458 STX8Q9UNK0 236 aa12.93□□□□□ -0.34
NFKB1-205ENST00000505458 PCDHB6Q9Y5E3 794 aa12.93□□□□□ -0.34
NFKB1-205ENST00000505458 GRIK5Q16478 980 aa12.93□□□□□ -0.34
NFKB1-205ENST00000505458 RRP36Q96EU6 259 aaKnown RBP12.93□□□□□ -0.34
NFKB1-205ENST00000505458 BARHL2Q9NY43 387 aa12.93□□□□□ -0.34
NFKB1-205ENST00000505458 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.93□□□□□ -0.34
NFKB1-205ENST00000505458 NMT2O60551 498 aa12.93□□□□□ -0.34
NFKB1-205ENST00000505458 KRT25Q7Z3Z0 450 aa12.93□□□□□ -0.34
NFKB1-205ENST00000505458 CMTR1Q8N1G2 835 aaKnown RBP12.93□□□□□ -0.34
NFKB1-205ENST00000505458 OXER1Q8TDS5 423 aa12.93□□□□□ -0.34
NFKB1-205ENST00000505458 CLIP2Q9UDT6 1046 aa12.93□□□□□ -0.34
NFKB1-205ENST00000505458 SAP30BPQ9UHR5 308 aaKnown RBP12.93□□□□□ -0.34
NFKB1-205ENST00000505458 CCDC194A0A1B0GVG4 234 aa12.92□□□□□ -0.34
NFKB1-205ENST00000505458 LONP1P36776 959 aaKnown RBP12.92□□□□□ -0.34
NFKB1-205ENST00000505458 PLCD1P51178 756 aa12.92□□□□□ -0.34
NFKB1-205ENST00000505458 MYL5Q02045 173 aa12.92□□□□□ -0.34
NFKB1-205ENST00000505458 GABPAQ06546 454 aa12.92□□□□□ -0.34
NFKB1-205ENST00000505458 POSTNQ15063 836 aa12.92□□□□□ -0.34
NFKB1-205ENST00000505458 AOPEPQ8N6M6 819 aa12.92□□□□□ -0.34
NFKB1-205ENST00000505458 SMARCE1Q969G3 411 aa12.92□□□□□ -0.34
NFKB1-205ENST00000505458 ZDHHC15Q96MV8 337 aa12.92□□□□□ -0.34
NFKB1-205ENST00000505458 C6orf50Q9HD87 102 aa12.92□□□□□ -0.34
NFKB1-205ENST00000505458 GLT8D2Q9H1C3 349 aa12.92□□□□□ -0.34
NFKB1-205ENST00000505458 NPY5RQ15761 445 aa12.92□□□□□ -0.34
NFKB1-205ENST00000505458 SERPINB13Q9UIV8 391 aa12.92□□□□□ -0.34
NFKB1-205ENST00000505458 SMIM22K7EJ46 135 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 TPM2P07951 284 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 SOGA3Q5TF21 947 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 ZNF622Q969S3 477 aaKnown RBP eCLIP12.91□□□□□ -0.34
NFKB1-205ENST00000505458 SPTLC3Q9NUV7 552 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 GREB1LQ9C091 1923 aaPredicted RBP12.91□□□□□ -0.34
NFKB1-205ENST00000505458 KLRF2D3W0D1 207 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 MYL1P05976 194 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 PRPHP41219 470 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 TEX2Q8IWB9 1127 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 CLIC6Q96NY7 704 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 OSBPL5Q9H0X9 879 aaPredicted RBP12.91□□□□□ -0.34
NFKB1-205ENST00000505458 VPS33BQ9H267 617 aa12.91□□□□□ -0.34
NFKB1-205ENST00000505458 MAGEF1Q9HAY2 307 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms