RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ZYXQ15942 572 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-213ENST00000505074 CATSPERGQ6ZRH7 1159 aa19.47■□□□□ 0.71
PDLIM7-213ENST00000505074 SH3RF1Q7Z6J0 888 aa19.47■□□□□ 0.71
PDLIM7-213ENST00000505074 DPP9Q86TI2 863 aa19.47■□□□□ 0.71
PDLIM7-213ENST00000505074 TRIM43Q96BQ3 446 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-213ENST00000505074 PALD1Q9ULE6 856 aa19.47■□□□□ 0.71
PDLIM7-213ENST00000505074 APBB1O00213 710 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 ADCYAP1R1P41586 468 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 USP5P45974 858 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 PPP4CP60510 307 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 GRIN2CQ14957 1233 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 C1orf53Q5VUE5 145 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 ANO1Q5XXA6 986 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 MAGEB6Q8N7X4 407 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 MIGA1Q8NAN2 632 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 USP38Q8NB14 1042 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 RAPGEFL1Q9UHV5 662 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 TACC3Q9Y6A5 838 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 MYH1P12882 1939 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 CDH23Q9H251 3354 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 ZNF236Q9UL36 1845 aa19.46■□□□□ 0.71
PDLIM7-213ENST00000505074 SEPT4O43236 478 aa19.45■□□□□ 0.7
PDLIM7-213ENST00000505074 GH2P01242 217 aa19.45■□□□□ 0.7
PDLIM7-213ENST00000505074 USP14P54578 494 aa19.45■□□□□ 0.7
PDLIM7-213ENST00000505074 HSP90AB4PQ58FF6 505 aa19.45■□□□□ 0.7
PDLIM7-213ENST00000505074 OLFML2BQ68BL8 750 aa19.45■□□□□ 0.7
PDLIM7-213ENST00000505074 LBX2Q6XYB7 198 aa19.45■□□□□ 0.7
PDLIM7-213ENST00000505074 FERMT2Q96AC1 680 aa19.45■□□□□ 0.7
PDLIM7-213ENST00000505074 IL1RAPL2Q9NP60 686 aa19.45■□□□□ 0.7
PDLIM7-213ENST00000505074 BTBD7Q9P203 1132 aa19.45■□□□□ 0.7
PDLIM7-213ENST00000505074 IGHA2P01877 340 aa19.44■□□□□ 0.7
PDLIM7-213ENST00000505074 PLA2G5P39877 138 aa19.44■□□□□ 0.7
PDLIM7-213ENST00000505074 TLE2Q04725 743 aa19.44■□□□□ 0.7
PDLIM7-213ENST00000505074 MAP3K12Q12852 859 aa19.44■□□□□ 0.7
PDLIM7-213ENST00000505074 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-213ENST00000505074 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-213ENST00000505074 STRNO43815 780 aa19.43■□□□□ 0.7
PDLIM7-213ENST00000505074 IGSF3O75054 1194 aa19.43■□□□□ 0.7
PDLIM7-213ENST00000505074 DNAJB2P25686 324 aa19.43■□□□□ 0.7
PDLIM7-213ENST00000505074 LRRC41Q15345 812 aa19.43■□□□□ 0.7
PDLIM7-213ENST00000505074 ATXN2LQ8WWM7 1075 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-213ENST00000505074 FAM122AQ96E09 287 aa19.43■□□□□ 0.7
PDLIM7-213ENST00000505074 CLTBP09497 229 aa19.42■□□□□ 0.7
PDLIM7-213ENST00000505074 RAG1P15918 1043 aa19.42■□□□□ 0.7
PDLIM7-213ENST00000505074 VCAM1P19320 739 aa19.42■□□□□ 0.7
PDLIM7-213ENST00000505074 ADORA2AP29274 412 aa19.42■□□□□ 0.7
PDLIM7-213ENST00000505074 CERS3Q8IU89 383 aa19.42■□□□□ 0.7
PDLIM7-213ENST00000505074 RHPN1Q8TCX5 695 aa19.42■□□□□ 0.7
PDLIM7-213ENST00000505074 KIAA1683Q9H0B3 1180 aa19.42■□□□□ 0.7
PDLIM7-213ENST00000505074 ZNF576Q9H609 170 aa19.42■□□□□ 0.7
PDLIM7-213ENST00000505074 ANTXR1Q9H6X2 564 aa19.42■□□□□ 0.7
PDLIM7-213ENST00000505074 SLC5A4Q9NY91 659 aa19.42■□□□□ 0.7
PDLIM7-213ENST00000505074 COG6Q9Y2V7 657 aa19.42■□□□□ 0.7
PDLIM7-213ENST00000505074 SMCHD1A6NHR9 2005 aa19.41■□□□□ 0.7
PDLIM7-213ENST00000505074 SPDYE16A6NNV3 312 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-213ENST00000505074 HMMRO75330 724 aa19.41■□□□□ 0.7
PDLIM7-213ENST00000505074 EPHB4P54760 987 aa19.41■□□□□ 0.7
PDLIM7-213ENST00000505074 FPGSQ05932 587 aa19.41■□□□□ 0.7
PDLIM7-213ENST00000505074 RAB3GAP1Q15042 981 aa19.41■□□□□ 0.7
PDLIM7-213ENST00000505074 GAS2L1Q99501 681 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-213ENST00000505074 ZNFX1Q9P2E3 1918 aaKnown RBP19.41■□□□□ 0.7
PDLIM7-213ENST00000505074 ITGB8P26012 769 aa19.4■□□□□ 0.7
PDLIM7-213ENST00000505074 TATDN1Q6P1N9 297 aa19.4■□□□□ 0.7
PDLIM7-213ENST00000505074 CLASRPQ8N2M8 674 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-213ENST00000505074 PPM1EQ8WY54 764 aa19.4■□□□□ 0.7
PDLIM7-213ENST00000505074 TIFAQ96CG3 184 aa19.4■□□□□ 0.7
PDLIM7-213ENST00000505074 RPAP3Q9H6T3 665 aaPredicted RBP19.4■□□□□ 0.7
PDLIM7-213ENST00000505074 DDX19BQ9UMR2 479 aa19.4■□□□□ 0.7
PDLIM7-213ENST00000505074 NAV1Q8NEY1 1877 aa19.39■□□□□ 0.7
PDLIM7-213ENST00000505074 KIAA0355O15063 1070 aa19.39■□□□□ 0.69
PDLIM7-213ENST00000505074 IFIT2P09913 472 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-213ENST00000505074 TTF1Q15361 905 aaPredicted RBP19.39■□□□□ 0.69
PDLIM7-213ENST00000505074 FAM47AQ5JRC9 791 aa19.39■□□□□ 0.69
PDLIM7-213ENST00000505074 KIF1BPQ96EK5 621 aa19.39■□□□□ 0.69
PDLIM7-213ENST00000505074 ASB2Q96Q27 587 aa19.39■□□□□ 0.69
PDLIM7-213ENST00000505074 DNAJC2Q99543 621 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-213ENST00000505074 MOV10L1Q9BXT6 1211 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-213ENST00000505074 THEGQ9P2T0 379 aa19.39■□□□□ 0.69
PDLIM7-213ENST00000505074 PHF24Q9UPV7 400 aa19.39■□□□□ 0.69
PDLIM7-213ENST00000505074 MUC3AQ02505 3323 aa19.39■□□□□ 0.69
PDLIM7-213ENST00000505074 PLXNA1Q9UIW2 1896 aa19.39■□□□□ 0.69
PDLIM7-213ENST00000505074 PRAMEF19Q5SWL8 479 aa19.38■□□□□ 0.69
PDLIM7-213ENST00000505074 RPAP2Q8IXW5 612 aaPredicted RBP19.38■□□□□ 0.69
PDLIM7-213ENST00000505074 SHCBP1Q8NEM2 672 aa19.38■□□□□ 0.69
PDLIM7-213ENST00000505074 ACER1Q8TDN7 264 aa19.38■□□□□ 0.69
PDLIM7-213ENST00000505074 ADAMTS19Q8TE59 1207 aa19.38■□□□□ 0.69
PDLIM7-213ENST00000505074 CABP5Q9NP86 173 aa19.38■□□□□ 0.69
PDLIM7-213ENST00000505074 MAGEB6P1A0A0J9YX57 407 aa19.37■□□□□ 0.69
PDLIM7-213ENST00000505074 PQBP1O60828 265 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-213ENST00000505074 COG2Q14746 738 aa19.37■□□□□ 0.69
PDLIM7-213ENST00000505074 ABCB5Q2M3G0 1257 aa19.37■□□□□ 0.69
PDLIM7-213ENST00000505074 CERKLQ49MI3 558 aaPredicted RBP19.37■□□□□ 0.69
PDLIM7-213ENST00000505074 RNF180Q86T96 592 aa19.37■□□□□ 0.69
PDLIM7-213ENST00000505074 TTC6Q86TZ1 520 aa19.37■□□□□ 0.69
PDLIM7-213ENST00000505074 IL27Q8NEV9 243 aa19.37■□□□□ 0.69
PDLIM7-213ENST00000505074 SPATC1LQ9H0A9 340 aa19.37■□□□□ 0.69
PDLIM7-213ENST00000505074 XPNPEP3Q9NQH7 507 aa19.37■□□□□ 0.69
PDLIM7-213ENST00000505074 TMEM39AQ9NV64 488 aa19.37■□□□□ 0.69
PDLIM7-213ENST00000505074 HOXC10Q9NYD6 342 aa19.37■□□□□ 0.69
PDLIM7-213ENST00000505074 SERPINB13Q9UIV8 391 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms