RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 TSPY2A6NKD2 308 aa24.49■■□□□ 1.51
DDR1-255ENST00000504927 SGSM2O43147 1006 aa24.49■■□□□ 1.51
DDR1-255ENST00000504927 IMMTQ16891 758 aaKnown RBP24.49■■□□□ 1.51
DDR1-255ENST00000504927 FAM47AQ5JRC9 791 aa24.49■■□□□ 1.51
DDR1-255ENST00000504927 AKNAD1Q5T1N1 836 aa24.49■■□□□ 1.51
DDR1-255ENST00000504927 SKAP1Q86WV1 359 aa24.49■■□□□ 1.51
DDR1-255ENST00000504927 CLEC10AQ8IUN9 316 aa24.49■■□□□ 1.51
DDR1-255ENST00000504927 RPAP3Q9H6T3 665 aaPredicted RBP24.49■■□□□ 1.51
DDR1-255ENST00000504927 TRIM17Q9Y577 477 aa24.49■■□□□ 1.51
DDR1-255ENST00000504927 PLIN4Q96Q06 1357 aa24.49■■□□□ 1.51
DDR1-255ENST00000504927 RANBP6O60518 1105 aaKnown RBP24.48■■□□□ 1.51
DDR1-255ENST00000504927 TTLL1O95922 423 aa24.48■■□□□ 1.51
DDR1-255ENST00000504927 MYH8P13535 1937 aa24.48■■□□□ 1.51
DDR1-255ENST00000504927 HAND2P61296 217 aa24.48■■□□□ 1.51
DDR1-255ENST00000504927 HERVK_113P62684 666 aa24.48■■□□□ 1.51
DDR1-255ENST00000504927 FAM110CQ1W6H9 321 aa24.48■■□□□ 1.51
DDR1-255ENST00000504927 OTOP1Q7RTM1 612 aa24.48■■□□□ 1.51
DDR1-255ENST00000504927 ANKRD13CQ8N6S4 541 aa24.48■■□□□ 1.51
DDR1-255ENST00000504927 STAG1Q8WVM7 1258 aa24.48■■□□□ 1.51
DDR1-255ENST00000504927 IL25Q9H293 177 aa24.48■■□□□ 1.51
DDR1-255ENST00000504927 INCENPQ9NQS7 918 aa24.48■■□□□ 1.51
DDR1-255ENST00000504927 HOXC10Q9NYD6 342 aa24.48■■□□□ 1.51
DDR1-255ENST00000504927 CLIP2Q9UDT6 1046 aa24.48■■□□□ 1.51
DDR1-255ENST00000504927 HOXD10P28358 340 aa24.47■■□□□ 1.51
DDR1-255ENST00000504927 CEP95Q96GE4 821 aa24.47■■□□□ 1.51
DDR1-255ENST00000504927 TOMM22Q9NS69 142 aa24.47■■□□□ 1.51
DDR1-255ENST00000504927 CENPFP49454 3210 aa24.47■■□□□ 1.51
DDR1-255ENST00000504927 WDR46O15213 610 aaKnown RBP24.46■■□□□ 1.51
DDR1-255ENST00000504927 PSMC4P43686 418 aa24.46■■□□□ 1.51
DDR1-255ENST00000504927 COG2Q14746 738 aa24.46■■□□□ 1.51
DDR1-255ENST00000504927 FBXO46Q6PJ61 603 aaPredicted RBP24.46■■□□□ 1.51
DDR1-255ENST00000504927 MORF4L1Q9UBU8 362 aa24.46■■□□□ 1.51
DDR1-255ENST00000504927 TACC3Q9Y6A5 838 aa24.46■■□□□ 1.51
DDR1-255ENST00000504927 FMNL1O95466 1100 aaPredicted RBP24.45■■□□□ 1.5
DDR1-255ENST00000504927 PRMT2P55345 433 aa24.45■■□□□ 1.5
DDR1-255ENST00000504927 FCGRTP55899 365 aa24.45■■□□□ 1.5
DDR1-255ENST00000504927 CASC1Q6TDU7 716 aa24.45■■□□□ 1.5
DDR1-255ENST00000504927 LBX2Q6XYB7 198 aa24.45■■□□□ 1.5
DDR1-255ENST00000504927 KIAA1211Q6ZU35 1233 aa24.45■■□□□ 1.5
DDR1-255ENST00000504927 GPRC5AQ8NFJ5 357 aa24.45■■□□□ 1.5
DDR1-255ENST00000504927 TCP11L1Q9NUJ3 509 aa24.45■■□□□ 1.5
DDR1-255ENST00000504927 RRP12Q5JTH9 1297 aaKnown RBP24.44■■□□□ 1.5
DDR1-255ENST00000504927 KIAA1755Q5JYT7 1200 aa24.44■■□□□ 1.5
DDR1-255ENST00000504927 SPICE1Q8N0Z3 855 aa24.44■■□□□ 1.5
DDR1-255ENST00000504927 TANGO6Q9C0B7 1094 aa24.44■■□□□ 1.5
DDR1-255ENST00000504927 NBPF3Q9H094 633 aa24.44■■□□□ 1.5
DDR1-255ENST00000504927 PTPN22Q9Y2R2 807 aa24.44■■□□□ 1.5
DDR1-255ENST00000504927 RABGAP1Q9Y3P9 1069 aa24.44■■□□□ 1.5
DDR1-255ENST00000504927 U3KPZ7 1027 aaPredicted RBP24.44■■□□□ 1.5
DDR1-255ENST00000504927 F5H6K3 240 aa24.43■■□□□ 1.5
DDR1-255ENST00000504927 KLRC3Q07444 240 aa24.43■■□□□ 1.5
DDR1-255ENST00000504927 TBC1D10CQ8IV04 446 aa24.43■■□□□ 1.5
DDR1-255ENST00000504927 ESR2Q92731 530 aa24.43■■□□□ 1.5
DDR1-255ENST00000504927 ARHGAP39Q9C0H5 1083 aa24.43■■□□□ 1.5
DDR1-255ENST00000504927 IL17RBQ9NRM6 502 aa24.43■■□□□ 1.5
DDR1-255ENST00000504927 RBPJLQ9UBG7 517 aa24.43■■□□□ 1.5
DDR1-255ENST00000504927 PTH1RQ03431 593 aa24.42■■□□□ 1.5
DDR1-255ENST00000504927 GMCL1P1Q8NEA9 526 aa24.42■■□□□ 1.5
DDR1-255ENST00000504927 MAP4K1Q92918 833 aa24.42■■□□□ 1.5
DDR1-255ENST00000504927 TRIM47Q96LD4 638 aa24.42■■□□□ 1.5
DDR1-255ENST00000504927 ESYT1Q9BSJ8 1104 aa24.42■■□□□ 1.5
DDR1-255ENST00000504927 MYPNQ86TC9 1320 aa24.41■■□□□ 1.5
DDR1-255ENST00000504927 CCDC85CA6NKD9 419 aa24.41■■□□□ 1.5
DDR1-255ENST00000504927 RAD21O60216 631 aa24.41■■□□□ 1.5
DDR1-255ENST00000504927 NOVP48745 357 aa24.41■■□□□ 1.5
DDR1-255ENST00000504927 TTC14Q96N46 770 aa24.41■■□□□ 1.5
DDR1-255ENST00000504927 KRT23Q9C075 422 aa24.41■■□□□ 1.5
DDR1-255ENST00000504927 CNNM2Q9H8M5 875 aa24.41■■□□□ 1.5
DDR1-255ENST00000504927 STX8Q9UNK0 236 aa24.41■■□□□ 1.5
DDR1-255ENST00000504927 GREB1LQ9C091 1923 aaPredicted RBP24.41■■□□□ 1.5
DDR1-255ENST00000504927 CDC45O75419 566 aa24.4■■□□□ 1.5
DDR1-255ENST00000504927 FLOT1O75955 427 aa24.4■■□□□ 1.5
DDR1-255ENST00000504927 CTGFP29279 349 aa24.4■■□□□ 1.5
DDR1-255ENST00000504927 CCDC178Q5BJE1 867 aa24.4■■□□□ 1.5
DDR1-255ENST00000504927 MB21D1Q8N884 522 aa24.4■■□□□ 1.5
DDR1-255ENST00000504927 TXNRD2Q9NNW7 524 aa24.4■■□□□ 1.5
DDR1-255ENST00000504927 SRRDQ9UH36 339 aa24.4■■□□□ 1.5
DDR1-255ENST00000504927 HPS5Q9UPZ3 1129 aa24.4■■□□□ 1.5
DDR1-255ENST00000504927 SPDYE16A6NNV3 312 aaPredicted RBP24.39■■□□□ 1.49
DDR1-255ENST00000504927 TNPO2O14787 897 aaKnown RBP24.39■■□□□ 1.49
DDR1-255ENST00000504927 ECM2O94769 699 aaPredicted RBP24.39■■□□□ 1.49
DDR1-255ENST00000504927 NDUFB10O96000 172 aa24.39■■□□□ 1.49
DDR1-255ENST00000504927 DSG3P32926 999 aa24.39■■□□□ 1.49
DDR1-255ENST00000504927 ERVK-9P63128 1117 aa24.39■■□□□ 1.49
DDR1-255ENST00000504927 ERVK-24P63145 666 aa24.39■■□□□ 1.49
DDR1-255ENST00000504927 CCNA1P78396 465 aa24.39■■□□□ 1.49
DDR1-255ENST00000504927 COA7Q96BR5 231 aa24.39■■□□□ 1.49
DDR1-255ENST00000504927 NMT2O60551 498 aa24.38■■□□□ 1.49
DDR1-255ENST00000504927 Q3C1V9 767 aa24.38■■□□□ 1.49
DDR1-255ENST00000504927 PAGR1Q9BTK6 254 aa24.38■■□□□ 1.49
DDR1-255ENST00000504927 MAPK4P31152 587 aa24.37■■□□□ 1.49
DDR1-255ENST00000504927 TRDNQ13061 729 aa24.37■■□□□ 1.49
DDR1-255ENST00000504927 FAM83BQ5T0W9 1011 aa24.37■■□□□ 1.49
DDR1-255ENST00000504927 SLFN13Q68D06 897 aa24.37■■□□□ 1.49
DDR1-255ENST00000504927 POTEEQ6S8J3 1075 aa24.37■■□□□ 1.49
DDR1-255ENST00000504927 IQCA1Q86XH1 822 aa24.37■■□□□ 1.49
DDR1-255ENST00000504927 CCAR1Q8IX12 1150 aaKnown RBP24.37■■□□□ 1.49
DDR1-255ENST00000504927 LRRC47Q8N1G4 583 aaKnown RBP24.37■■□□□ 1.49
DDR1-255ENST00000504927 NEDD4P46934 1319 aa24.36■■□□□ 1.49
DDR1-255ENST00000504927 KDM4AO75164 1064 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms