RNA–Protein interactions for RNA: ENST00000504441.6

PAAF1-204, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5

Gene PAAF1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-204ENST00000504441 SSH3Q8TE77 659 aa17.15■□□□□ 0.34
PAAF1-204ENST00000504441 ERCC3P19447 782 aa17.14■□□□□ 0.33
PAAF1-204ENST00000504441 ADCYAP1R1P41586 468 aa17.14■□□□□ 0.33
PAAF1-204ENST00000504441 COG2Q14746 738 aa17.14■□□□□ 0.33
PAAF1-204ENST00000504441 EAF2Q96CJ1 260 aaPredicted RBP17.14■□□□□ 0.33
PAAF1-204ENST00000504441 LTBP2Q14767 1821 aa17.14■□□□□ 0.33
PAAF1-204ENST00000504441 A0A1W2PRG0 241 aa17.13■□□□□ 0.33
PAAF1-204ENST00000504441 STRNO43815 780 aa17.13■□□□□ 0.33
PAAF1-204ENST00000504441 IGSF3O75054 1194 aa17.13■□□□□ 0.33
PAAF1-204ENST00000504441 COBLO75128 1261 aa17.13■□□□□ 0.33
PAAF1-204ENST00000504441 EVX2Q03828 476 aa17.13■□□□□ 0.33
PAAF1-204ENST00000504441 OLFML2BQ68BL8 750 aa17.13■□□□□ 0.33
PAAF1-204ENST00000504441 SH3RF1Q7Z6J0 888 aa17.13■□□□□ 0.33
PAAF1-204ENST00000504441 NCAPG2Q86XI2 1143 aa17.13■□□□□ 0.33
PAAF1-204ENST00000504441 MYLIPQ8WY64 445 aa17.13■□□□□ 0.33
PAAF1-204ENST00000504441 SPATC1LQ9H0A9 340 aa17.13■□□□□ 0.33
PAAF1-204ENST00000504441 SEMA6BQ9H3T3 888 aa17.13■□□□□ 0.33
PAAF1-204ENST00000504441 HOXC10Q9NYD6 342 aa17.13■□□□□ 0.33
PAAF1-204ENST00000504441 DNAH12Q6ZR08 3092 aa17.13■□□□□ 0.33
PAAF1-204ENST00000504441 MAGEB6P1A0A0J9YX57 407 aa17.12■□□□□ 0.33
PAAF1-204ENST00000504441 SEPT4O43236 478 aa17.12■□□□□ 0.33
PAAF1-204ENST00000504441 ZKSCAN2Q63HK3 967 aa17.12■□□□□ 0.33
PAAF1-204ENST00000504441 PDLIM7Q9NR12 457 aa17.12■□□□□ 0.33
PAAF1-204ENST00000504441 MCM9Q9NXL9 1143 aa17.12■□□□□ 0.33
PAAF1-204ENST00000504441 IGHA2P01877 340 aa17.11■□□□□ 0.33
PAAF1-204ENST00000504441 FAM47AQ5JRC9 791 aa17.11■□□□□ 0.33
PAAF1-204ENST00000504441 AACSQ86V21 672 aa17.11■□□□□ 0.33
PAAF1-204ENST00000504441 SPICE1Q8N0Z3 855 aa17.11■□□□□ 0.33
PAAF1-204ENST00000504441 SLC5A4Q9NY91 659 aa17.11■□□□□ 0.33
PAAF1-204ENST00000504441 TRIM43BA6NCK2 446 aa17.1■□□□□ 0.33
PAAF1-204ENST00000504441 FLOT1O75955 427 aa17.1■□□□□ 0.33
PAAF1-204ENST00000504441 LRRC41Q15345 812 aa17.1■□□□□ 0.33
PAAF1-204ENST00000504441 KIAA1755Q5JYT7 1200 aa17.1■□□□□ 0.33
PAAF1-204ENST00000504441 CLEC10AQ8IUN9 316 aa17.1■□□□□ 0.33
PAAF1-204ENST00000504441 ITPRIPQ8IWB1 547 aa17.1■□□□□ 0.33
PAAF1-204ENST00000504441 SHCBP1Q8NEM2 672 aa17.1■□□□□ 0.33
PAAF1-204ENST00000504441 TRIM43Q96BQ3 446 aaPredicted RBP17.1■□□□□ 0.33
PAAF1-204ENST00000504441 RIOK1Q9BRS2 568 aaKnown RBP17.1■□□□□ 0.33
PAAF1-204ENST00000504441 BCL11AQ9H165 835 aa17.1■□□□□ 0.33
PAAF1-204ENST00000504441 TTYH1Q9H313 450 aaPredicted RBP17.1■□□□□ 0.33
PAAF1-204ENST00000504441 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
PAAF1-204ENST00000504441 RLFQ13129 1914 aa17.09■□□□□ 0.33
PAAF1-204ENST00000504441 FOSL2P15408 326 aa17.09■□□□□ 0.33
PAAF1-204ENST00000504441 SMAD3P84022 425 aaKnown RBP17.09■□□□□ 0.33
PAAF1-204ENST00000504441 TLE2Q04725 743 aa17.09■□□□□ 0.33
PAAF1-204ENST00000504441 SLC44A5Q8NCS7 719 aa17.09■□□□□ 0.33
PAAF1-204ENST00000504441 ATG4CQ96DT6 458 aa17.09■□□□□ 0.33
PAAF1-204ENST00000504441 CRNKL1Q9BZJ0 848 aaKnown RBP17.09■□□□□ 0.33
PAAF1-204ENST00000504441 MROH8Q9H579 483 aa17.09■□□□□ 0.33
PAAF1-204ENST00000504441 LAMA2P24043 3122 aaKnown RBP17.09■□□□□ 0.33
PAAF1-204ENST00000504441 ZNF236Q9UL36 1845 aa17.08■□□□□ 0.33
PAAF1-204ENST00000504441 CYP2D6P10635 497 aa17.08■□□□□ 0.32
PAAF1-204ENST00000504441 DSG3P32926 999 aa17.08■□□□□ 0.32
PAAF1-204ENST00000504441 GABPAQ06546 454 aa17.08■□□□□ 0.32
PAAF1-204ENST00000504441 SNX17Q15036 470 aa17.08■□□□□ 0.32
PAAF1-204ENST00000504441 SLC9C2Q5TAH2 1124 aa17.08■□□□□ 0.32
PAAF1-204ENST00000504441 FTSJ3Q8IY81 847 aaKnown RBP17.08■□□□□ 0.32
PAAF1-204ENST00000504441 SDR42E1Q8WUS8 393 aa17.08■□□□□ 0.32
PAAF1-204ENST00000504441 MAML3Q96JK9 1138 aa17.08■□□□□ 0.32
PAAF1-204ENST00000504441 RNPC3Q96LT9 517 aaKnown RBP17.08■□□□□ 0.32
PAAF1-204ENST00000504441 XPNPEP3Q9NQH7 507 aa17.08■□□□□ 0.32
PAAF1-204ENST00000504441 EXOC6BQ9Y2D4 811 aa17.08■□□□□ 0.32
PAAF1-204ENST00000504441 NAV1Q8NEY1 1877 aa17.07■□□□□ 0.32
PAAF1-204ENST00000504441 PGK1P00558 417 aa17.07■□□□□ 0.32
PAAF1-204ENST00000504441 FCER1AP12319 257 aa17.07■□□□□ 0.32
PAAF1-204ENST00000504441 ITGB8P26012 769 aa17.07■□□□□ 0.32
PAAF1-204ENST00000504441 TMEM179Q6ZVK1 233 aa17.07■□□□□ 0.32
PAAF1-204ENST00000504441 MB21D1Q8N884 522 aa17.07■□□□□ 0.32
PAAF1-204ENST00000504441 DYNLL2Q96FJ2 89 aa17.07■□□□□ 0.32
PAAF1-204ENST00000504441 IL1RAPL2Q9NP60 686 aa17.07■□□□□ 0.32
PAAF1-204ENST00000504441 RAD21O60216 631 aa17.06■□□□□ 0.32
PAAF1-204ENST00000504441 PQBP1O60828 265 aaKnown RBP17.06■□□□□ 0.32
PAAF1-204ENST00000504441 PGK2P07205 417 aa17.06■□□□□ 0.32
PAAF1-204ENST00000504441 CLTBP09497 229 aa17.06■□□□□ 0.32
PAAF1-204ENST00000504441 RARBP10826 455 aa17.06■□□□□ 0.32
PAAF1-204ENST00000504441 PDE6AP16499 860 aa17.06■□□□□ 0.32
PAAF1-204ENST00000504441 EPHB4P54760 987 aa17.06■□□□□ 0.32
PAAF1-204ENST00000504441 TTF1Q15361 905 aaPredicted RBP17.06■□□□□ 0.32
PAAF1-204ENST00000504441 ABRAQ8N0Z2 381 aa17.06■□□□□ 0.32
PAAF1-204ENST00000504441 DNAJC2Q99543 621 aaKnown RBP17.06■□□□□ 0.32
PAAF1-204ENST00000504441 ARHGEF10LQ9HCE6 1279 aa17.06■□□□□ 0.32
PAAF1-204ENST00000504441 TACC3Q9Y6A5 838 aa17.06■□□□□ 0.32
PAAF1-204ENST00000504441 A0A0G2JMZ2 1700 aa17.05■□□□□ 0.32
PAAF1-204ENST00000504441 ZNF532Q9HCE3 1301 aa17.05■□□□□ 0.32
PAAF1-204ENST00000504441 AKR1B1P15121 316 aa17.05■□□□□ 0.32
PAAF1-204ENST00000504441 RAG1P15918 1043 aa17.05■□□□□ 0.32
PAAF1-204ENST00000504441 ICA1Q05084 483 aa17.05■□□□□ 0.32
PAAF1-204ENST00000504441 TMED8Q6PL24 325 aaPredicted RBP17.05■□□□□ 0.32
PAAF1-204ENST00000504441 LCORLQ8N3X6 602 aa17.05■□□□□ 0.32
PAAF1-204ENST00000504441 LENG1Q96BZ8 264 aaPredicted RBP17.05■□□□□ 0.32
PAAF1-204ENST00000504441 MMP19Q99542 508 aa17.05■□□□□ 0.32
PAAF1-204ENST00000504441 DCP1AQ9NPI6 582 aaPredicted RBP17.05■□□□□ 0.32
PAAF1-204ENST00000504441 PHF24Q9UPV7 400 aa17.05■□□□□ 0.32
PAAF1-204ENST00000504441 EYSQ5T1H1 3165 aa17.04■□□□□ 0.32
PAAF1-204ENST00000504441 APBB1O00213 710 aa17.04■□□□□ 0.32
PAAF1-204ENST00000504441 GOLIM4O00461 696 aa17.04■□□□□ 0.32
PAAF1-204ENST00000504441 TAL1P17542 331 aaPredicted RBP17.04■□□□□ 0.32
PAAF1-204ENST00000504441 KCTD2Q14681 263 aa17.04■□□□□ 0.32
PAAF1-204ENST00000504441 TMEM132BQ14DG7 1078 aa17.04■□□□□ 0.32
PAAF1-204ENST00000504441 C1orf53Q5VUE5 145 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms