RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 PHACTR2O75167 634 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 CLK1P49759 484 aaKnown RBP4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 GNAQP50148 359 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 CLCN2P51788 898 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 HAND2P61296 217 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 LAMB3Q13751 1172 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 COL19A1Q14993 1142 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 TAF7Q15545 349 aaPredicted RBP4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 ELF2Q15723 593 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 SLC4A8Q2Y0W8 1093 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 C3orf67Q6ZVT6 689 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 BPHLQ86WA6 291 aaPredicted RBP4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 B4GALNT2Q8NHY0 566 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 N4BP2L2Q92802 583 aaPredicted RBP4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 MAELQ96JY0 434 aaKnown RBP4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 SETDB2Q96T68 719 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 IQCGQ9H095 443 aaKnown RBP4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 LY75O60449 1722 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 TATP17735 454 aaPredicted RBP4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 SPRED3Q2MJR0 410 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 TTC39AQ5SRH9 613 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 TMC6Q7Z403 805 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 WDR63Q8IWG1 891 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 CCAR1Q8IX12 1150 aaKnown RBP4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 LMBR1Q8WVP7 490 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 CASZ1Q86V15 1759 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 TTC21AQ8NDW8 1320 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 CHD4Q14839 1912 aa4.14□□□□□ -1.75
PCDH11X-208ENST00000504220 SHTN1A0MZ66 631 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 MINDY4BA8MYZ0 360 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 OPA1O60313 960 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 KRT38O76015 456 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 VCAM1P19320 739 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 MX1P20591 662 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 VPS72Q15906 364 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 FAM209AQ5JX71 171 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 KIAA1328Q86T90 577 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 SLF2Q8IX21 1173 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 ZGPATQ8N5A5 531 aaKnown RBP4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 CUL5Q93034 780 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 FBXL18Q96ME1 805 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 MAP3K20Q9NYL2 800 aaKnown RBP4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 NCK2O43639 380 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 SHOX2O60902 331 aaPredicted RBP4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 ERLIN1O75477 346 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 TUBP50607 506 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 FAM98CQ17RN3 349 aaKnown RBP4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 RNF187Q5TA31 235 aaPredicted RBP4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 MPRIPQ6WCQ1 1025 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 BICDL1Q6ZP65 573 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 RPUSD2Q8IZ73 545 aaKnown RBP4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 ZFAND2BQ8WV99 257 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 AZIN2Q96A70 460 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 VTI1AQ96AJ9 217 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 SENP7Q9BQF6 1050 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 CFAP45Q9UL16 551 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 ADAMTS7Q9UKP4 1686 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 MAP3K19Q56UN5 1328 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 MYH13Q9UKX3 1938 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 GOLGA6L10A0A0M3HER8 536 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 GOLGA6L10A6NI86 522 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 CHL1O00533 1208 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 CBFA2T2O43439 604 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 USP5P45974 858 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 BPIFB4P59827 614 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 GSTM4Q03013 218 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 TBC1D10BQ4KMP7 808 aaPredicted RBP4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 CCDC158Q5M9N0 1113 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 CCDC183Q5T5S1 534 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 TRIM22Q8IYM9 498 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 FSIP1Q8NA03 581 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 FRS2Q8WU20 508 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 INO80BQ9C086 356 aaPredicted RBP4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 CNPY2Q9Y2B0 182 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 ATP8A1Q9Y2Q0 1164 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 PSME4Q14997 1843 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 GRIN2DO15399 1336 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 RTL1A6NKG5 1358 aa4.13□□□□□ -1.75
PCDH11X-208ENST00000504220 MACROD2A1Z1Q3 448 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 CCDC69A6NI79 296 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 PER1O15534 1290 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 TOP1P11387 765 aaKnown RBP4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 RLBP1P12271 317 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 GJB2P29033 226 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 TXLNAP40222 546 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 TSPAN7P41732 249 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 GCLCP48506 637 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 CCT4P50991 539 aaKnown RBP4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 GNG11P61952 73 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 FKBP15Q5T1M5 1219 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 CYP4A22Q5TCH4 519 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 AGAP9Q5VTM2 703 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 KANK3Q6NY19 840 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 FAM173BQ6P4H8 233 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 KRT77Q7Z794 578 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 GABPB2Q8TAK5 448 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 CAPS2Q9BXY5 557 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 RABEP2Q9H5N1 569 aa4.12□□□□□ -1.75
PCDH11X-208ENST00000504220 HOMER3Q9NSC5 361 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms