RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 WASH4PA8MWX3 477 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 ABLIM1O14639 778 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 FZD7O75084 574 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 CST3P01034 146 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 ZNF20P17024 532 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 ETV3P41162 512 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 CDR1P51861 262 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 PLCB3Q01970 1234 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 GAB4Q2WGN9 574 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 NT5DC1Q5TFE4 455 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 NLGN1Q8N2Q7 840 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 TP53I13Q8NBR0 393 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 EPS8L3Q8TE67 593 aaKnown RBP4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 ALKBH8Q96BT7 664 aaKnown RBP4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 DMRTB1Q96MA1 342 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 BCO2Q9BYV7 579 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 ANO2Q9NQ90 1003 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 SNCAIPQ9Y6H5 919 aa4.38□□□□□ -1.71
HMGB3P17-201ENST00000504195 ACVRL1P37023 503 aa4.37□□□□□ -1.71
HMGB3P17-201ENST00000504195 MPRIPQ6WCQ1 1025 aa4.37□□□□□ -1.71
HMGB3P17-201ENST00000504195 GLYCTKQ8IVS8 523 aa4.37□□□□□ -1.71
HMGB3P17-201ENST00000504195 RIN3Q8TB24 985 aa4.37□□□□□ -1.71
HMGB3P17-201ENST00000504195 GRIN3AQ8TCU5 1115 aa4.37□□□□□ -1.71
HMGB3P17-201ENST00000504195 XAGE3Q8WTP9 111 aa4.37□□□□□ -1.71
HMGB3P17-201ENST00000504195 LOXL4Q96JB6 756 aa4.37□□□□□ -1.71
HMGB3P17-201ENST00000504195 GPR62Q9BZJ7 368 aa4.37□□□□□ -1.71
HMGB3P17-201ENST00000504195 NIF3L1Q9GZT8 377 aa4.37□□□□□ -1.71
HMGB3P17-201ENST00000504195 PPM1HQ9ULR3 514 aa4.37□□□□□ -1.71
HMGB3P17-201ENST00000504195 ITGB3P05106 788 aa4.36□□□□□ -1.71
HMGB3P17-201ENST00000504195 ETF1P62495 437 aaKnown RBP4.36□□□□□ -1.71
HMGB3P17-201ENST00000504195 TMC1Q8TDI8 760 aa4.36□□□□□ -1.71
HMGB3P17-201ENST00000504195 SHISA4Q96DD7 197 aa4.36□□□□□ -1.71
HMGB3P17-201ENST00000504195 C8orf49Q96NF6 230 aa4.36□□□□□ -1.71
HMGB3P17-201ENST00000504195 C1QTNF3Q9BXJ4 246 aa4.36□□□□□ -1.71
HMGB3P17-201ENST00000504195 DUSP15Q9H1R2 295 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P17-201ENST00000504195 FBRSQ9HAH7 460 aa4.36□□□□□ -1.71
HMGB3P17-201ENST00000504195 KCNH3Q9ULD8 1083 aa4.36□□□□□ -1.71
HMGB3P17-201ENST00000504195 PCDHA11Q9Y5I1 949 aa4.36□□□□□ -1.71
HMGB3P17-201ENST00000504195 ENC1O14682 589 aa4.35□□□□□ -1.71
HMGB3P17-201ENST00000504195 GSTT1P30711 240 aa4.35□□□□□ -1.71
HMGB3P17-201ENST00000504195 CNR2P34972 360 aa4.35□□□□□ -1.71
HMGB3P17-201ENST00000504195 NKG7Q16617 165 aa4.35□□□□□ -1.71
HMGB3P17-201ENST00000504195 CDH24Q86UP0 819 aa4.35□□□□□ -1.71
HMGB3P17-201ENST00000504195 TSPYL5Q86VY4 417 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P17-201ENST00000504195 TTC9BQ8N6N2 239 aa4.35□□□□□ -1.71
HMGB3P17-201ENST00000504195 CHST13Q8NET6 341 aa4.35□□□□□ -1.71
HMGB3P17-201ENST00000504195 ANKRD24Q8TF21 1146 aa4.35□□□□□ -1.71
HMGB3P17-201ENST00000504195 SRCIN1Q9C0H9 1055 aa4.35□□□□□ -1.71
HMGB3P17-201ENST00000504195 TACC3Q9Y6A5 838 aa4.35□□□□□ -1.71
HMGB3P17-201ENST00000504195 H3BRB1 525 aa4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 FFAR3O14843 346 aa4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 GPR182O15218 404 aa4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 ARHGAP4P98171 946 aa4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 TMEM62Q0P6H9 643 aa4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 SLC14A2Q15849 920 aa4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 PRAMEF13Q5VWM6 474 aa4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 B4GALNT3Q6L9W6 998 aa4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 PHLDB3Q6NSJ2 640 aa4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 LRFN4Q6PJG9 635 aa4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 NLRX1Q86UT6 975 aa4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 IGDCC3Q8IVU1 814 aa4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 Q8N1X5 172 aa4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 SH3RF3Q8TEJ3 882 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 TUT1Q9H6E5 874 aaKnown RBP4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 CRTAC1Q9NQ79 661 aa4.34□□□□□ -1.71
HMGB3P17-201ENST00000504195 BUB1BO60566 1050 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P17-201ENST00000504195 PPP1R15AO75807 674 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P17-201ENST00000504195 YBX1P67809 324 aaKnown RBP4.33□□□□□ -1.72
HMGB3P17-201ENST00000504195 CAP1Q01518 475 aa4.33□□□□□ -1.72
HMGB3P17-201ENST00000504195 INPP5AQ14642 412 aa4.33□□□□□ -1.72
HMGB3P17-201ENST00000504195 CRIP3Q6Q6R5 217 aa4.33□□□□□ -1.72
HMGB3P17-201ENST00000504195 TPTE2Q6XPS3 522 aa4.33□□□□□ -1.72
HMGB3P17-201ENST00000504195 TMC6Q7Z403 805 aa4.33□□□□□ -1.72
HMGB3P17-201ENST00000504195 LDHDQ86WU2 507 aa4.33□□□□□ -1.72
HMGB3P17-201ENST00000504195 C3orf58Q8NDZ4 430 aa4.33□□□□□ -1.72
HMGB3P17-201ENST00000504195 PLPPR2Q96GM1 343 aa4.33□□□□□ -1.72
HMGB3P17-201ENST00000504195 SAMD11Q96NU1 681 aa4.33□□□□□ -1.72
HMGB3P17-201ENST00000504195 KRTAP3-1Q9BYR8 98 aa4.33□□□□□ -1.72
HMGB3P17-201ENST00000504195 PCED1AQ9H1Q7 454 aa4.33□□□□□ -1.72
HMGB3P17-201ENST00000504195 SDHBP21912 280 aa4.32□□□□□ -1.72
HMGB3P17-201ENST00000504195 SLC6A19Q695T7 634 aa4.32□□□□□ -1.72
HMGB3P17-201ENST00000504195 NXPE4Q6UWF7 544 aa4.32□□□□□ -1.72
HMGB3P17-201ENST00000504195 SPRED1Q7Z699 444 aa4.32□□□□□ -1.72
HMGB3P17-201ENST00000504195 MRPL41Q8IXM3 137 aaKnown RBP4.32□□□□□ -1.72
HMGB3P17-201ENST00000504195 DDX1Q92499 740 aaKnown RBP4.32□□□□□ -1.72
HMGB3P17-201ENST00000504195 DVL3Q92997 716 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P17-201ENST00000504195 Q96M66 194 aa4.32□□□□□ -1.72
HMGB3P17-201ENST00000504195 SPATA25Q9BR10 227 aa4.32□□□□□ -1.72
HMGB3P17-201ENST00000504195 GJA9P57773 515 aa4.31□□□□□ -1.72
HMGB3P17-201ENST00000504195 KISS1RQ969F8 398 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P17-201ENST00000504195 NAF1Q96HR8 494 aaKnown RBP4.31□□□□□ -1.72
HMGB3P17-201ENST00000504195 VPS11Q9H270 941 aa4.31□□□□□ -1.72
HMGB3P17-201ENST00000504195 C11orf21Q9P2W6 132 aa4.31□□□□□ -1.72
HMGB3P17-201ENST00000504195 CEP131Q9UPN4 1083 aa4.31□□□□□ -1.72
HMGB3P17-201ENST00000504195 PAGE1O75459 146 aa4.3□□□□□ -1.72
HMGB3P17-201ENST00000504195 USP2O75604 605 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P17-201ENST00000504195 MPOP05164 745 aa4.3□□□□□ -1.72
HMGB3P17-201ENST00000504195 PFKLP17858 780 aa4.3□□□□□ -1.72
HMGB3P17-201ENST00000504195 LIPIQ6XZB0 460 aa4.3□□□□□ -1.72
HMGB3P17-201ENST00000504195 LINC01599Q8WXQ3 324 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms