RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 FAM161BQ96MY7 647 aa7.4□□□□□ -1.22
UBE3D-205ENST00000503942 DPH2Q9BQC3 489 aaPredicted RBP7.4□□□□□ -1.22
UBE3D-205ENST00000503942 GCM1Q9NP62 436 aa7.4□□□□□ -1.22
UBE3D-205ENST00000503942 DUSP13Q9UII6 198 aa7.4□□□□□ -1.22
UBE3D-205ENST00000503942 YBX2Q9Y2T7 364 aaKnown RBP7.4□□□□□ -1.22
UBE3D-205ENST00000503942 E9PSI1 815 aa7.39□□□□□ -1.23
UBE3D-205ENST00000503942 TRIM13O60858 407 aa7.39□□□□□ -1.23
UBE3D-205ENST00000503942 ATP2B2Q01814 1243 aa7.39□□□□□ -1.23
UBE3D-205ENST00000503942 ZNF385BQ569K4 471 aa7.39□□□□□ -1.23
UBE3D-205ENST00000503942 DNAJB8Q8NHS0 232 aa7.39□□□□□ -1.23
UBE3D-205ENST00000503942 ZNF552Q9H707 407 aaPredicted RBP7.39□□□□□ -1.23
UBE3D-205ENST00000503942 GPATCH2Q9NW75 528 aa7.39□□□□□ -1.23
UBE3D-205ENST00000503942 TJP2Q9UDY2 1190 aa7.39□□□□□ -1.23
UBE3D-205ENST00000503942 KCTD3Q9Y597 815 aa7.39□□□□□ -1.23
UBE3D-205ENST00000503942 GFRA2O00451 464 aa7.38□□□□□ -1.23
UBE3D-205ENST00000503942 DAB2P98082 770 aa7.38□□□□□ -1.23
UBE3D-205ENST00000503942 MRPL58Q14197 206 aaKnown RBP7.38□□□□□ -1.23
UBE3D-205ENST00000503942 SV2BQ7L1I2 683 aa7.38□□□□□ -1.23
UBE3D-205ENST00000503942 TMC4Q7Z404 712 aa7.38□□□□□ -1.23
UBE3D-205ENST00000503942 GPR62Q9BZJ7 368 aa7.38□□□□□ -1.23
UBE3D-205ENST00000503942 RFXAPO00287 272 aa7.37□□□□□ -1.23
UBE3D-205ENST00000503942 KRTAP10-2P60368 255 aa7.37□□□□□ -1.23
UBE3D-205ENST00000503942 TTBK2Q6IQ55 1244 aa7.37□□□□□ -1.23
UBE3D-205ENST00000503942 TSPYL5Q86VY4 417 aaPredicted RBP7.37□□□□□ -1.23
UBE3D-205ENST00000503942 TMEM151BQ8IW70 566 aa7.37□□□□□ -1.23
UBE3D-205ENST00000503942 CXorf38Q8TB03 319 aa7.37□□□□□ -1.23
UBE3D-205ENST00000503942 DHX38Q92620 1227 aaKnown RBP7.37□□□□□ -1.23
UBE3D-205ENST00000503942 TMEM87BQ96K49 555 aa7.37□□□□□ -1.23
UBE3D-205ENST00000503942 FAM8A1Q9UBU6 413 aa7.37□□□□□ -1.23
UBE3D-205ENST00000503942 USP17L7P0C7H9 530 aa7.36□□□□□ -1.23
UBE3D-205ENST00000503942 VAMP1P23763 118 aa7.36□□□□□ -1.23
UBE3D-205ENST00000503942 XPCQ01831 940 aaPredicted RBP7.36□□□□□ -1.23
UBE3D-205ENST00000503942 SSPNQ14714 243 aa7.36□□□□□ -1.23
UBE3D-205ENST00000503942 SLC6A19Q695T7 634 aa7.36□□□□□ -1.23
UBE3D-205ENST00000503942 TMEM132EQ6IEE7 984 aa7.36□□□□□ -1.23
UBE3D-205ENST00000503942 DTWD2Q8NBA8 298 aa7.36□□□□□ -1.23
UBE3D-205ENST00000503942 SGPP1Q9BX95 441 aa7.36□□□□□ -1.23
UBE3D-205ENST00000503942 C12orf49Q9H741 205 aa7.36□□□□□ -1.23
UBE3D-205ENST00000503942 PCDHA11Q9Y5I1 949 aa7.36□□□□□ -1.23
UBE3D-205ENST00000503942 PGRP06401 933 aa7.35□□□□□ -1.23
UBE3D-205ENST00000503942 LTKP29376 864 aa7.35□□□□□ -1.23
UBE3D-205ENST00000503942 GNA15P30679 374 aa7.35□□□□□ -1.23
UBE3D-205ENST00000503942 PDE6BP35913 854 aa7.35□□□□□ -1.23
UBE3D-205ENST00000503942 SNX17Q15036 470 aa7.35□□□□□ -1.23
UBE3D-205ENST00000503942 LDLRAD1Q5T700 205 aa7.35□□□□□ -1.23
UBE3D-205ENST00000503942 RECKO95980 971 aa7.34□□□□□ -1.23
UBE3D-205ENST00000503942 RPS26P62854 115 aaKnown RBP7.34□□□□□ -1.23
UBE3D-205ENST00000503942 CHRNEQ04844 493 aa7.34□□□□□ -1.23
UBE3D-205ENST00000503942 PSMD2Q13200 908 aa7.34□□□□□ -1.23
UBE3D-205ENST00000503942 XYLT2Q9H1B5 865 aa7.34□□□□□ -1.23
UBE3D-205ENST00000503942 IGSF5Q9NSI5 407 aa7.34□□□□□ -1.23
UBE3D-205ENST00000503942 GPR160Q9UJ42 338 aa7.34□□□□□ -1.23
UBE3D-205ENST00000503942 CEP131Q9UPN4 1083 aa7.34□□□□□ -1.23
UBE3D-205ENST00000503942 SPG7Q9UQ90 795 aa7.34□□□□□ -1.23
UBE3D-205ENST00000503942 SEPT6Q14141 434 aa7.33□□□□□ -1.24
UBE3D-205ENST00000503942 SKOR2Q2VWA4 1001 aaPredicted RBP7.33□□□□□ -1.24
UBE3D-205ENST00000503942 SPPL2CQ8IUH8 684 aa7.33□□□□□ -1.24
UBE3D-205ENST00000503942 MCATQ8IVS2 390 aaKnown RBP7.33□□□□□ -1.24
UBE3D-205ENST00000503942 PPP1R13LQ8WUF5 828 aa7.33□□□□□ -1.24
UBE3D-205ENST00000503942 SHISA4Q96DD7 197 aa7.33□□□□□ -1.24
UBE3D-205ENST00000503942 TTF2Q9UNY4 1162 aaKnown RBP7.33□□□□□ -1.24
UBE3D-205ENST00000503942 AK5Q9Y6K8 562 aa7.33□□□□□ -1.24
UBE3D-205ENST00000503942 SORBS3O60504 671 aa7.32□□□□□ -1.24
UBE3D-205ENST00000503942 ANKS4BQ8N8V4 417 aa7.32□□□□□ -1.24
UBE3D-205ENST00000503942 SYTL4Q96C24 671 aaPredicted RBP7.32□□□□□ -1.24
UBE3D-205ENST00000503942 FRMD6Q96NE9 622 aa7.32□□□□□ -1.24
UBE3D-205ENST00000503942 BACH2Q9BYV9 841 aa7.32□□□□□ -1.24
UBE3D-205ENST00000503942 KCNH3Q9ULD8 1083 aa7.32□□□□□ -1.24
UBE3D-205ENST00000503942 PCDHB5Q9Y5E4 795 aa7.32□□□□□ -1.24
UBE3D-205ENST00000503942 ADAMTS20P59510 1910 aa7.31□□□□□ -1.24
UBE3D-205ENST00000503942 CTSHP09668 335 aa7.31□□□□□ -1.24
UBE3D-205ENST00000503942 PI3P19957 117 aa7.31□□□□□ -1.24
UBE3D-205ENST00000503942 DUSP4Q13115 394 aa7.31□□□□□ -1.24
UBE3D-205ENST00000503942 ACSF2Q96CM8 615 aaPredicted RBP7.31□□□□□ -1.24
UBE3D-205ENST00000503942 SIGLEC10Q96LC7 697 aa7.31□□□□□ -1.24
UBE3D-205ENST00000503942 EBF1Q9UH73 591 aa7.31□□□□□ -1.24
UBE3D-205ENST00000503942 ADAM30Q9UKF2 790 aa7.31□□□□□ -1.24
UBE3D-205ENST00000503942 PSPNO60542 156 aa7.3□□□□□ -1.24
UBE3D-205ENST00000503942 SASH1O94885 1247 aa7.3□□□□□ -1.24
UBE3D-205ENST00000503942 LMNB1P20700 586 aa7.3□□□□□ -1.24
UBE3D-205ENST00000503942 NFKB2Q00653 900 aa7.3□□□□□ -1.24
UBE3D-205ENST00000503942 TEKQ02763 1124 aa7.3□□□□□ -1.24
UBE3D-205ENST00000503942 PDE4BQ07343 736 aa7.3□□□□□ -1.24
UBE3D-205ENST00000503942 TSNAXIP1Q2TAA8 658 aa7.3□□□□□ -1.24
UBE3D-205ENST00000503942 PRRT2Q7Z6L0 340 aaPredicted RBP7.3□□□□□ -1.24
UBE3D-205ENST00000503942 CYB5D2Q8WUJ1 264 aa7.3□□□□□ -1.24
UBE3D-205ENST00000503942 MRS2Q9HD23 443 aa7.3□□□□□ -1.24
UBE3D-205ENST00000503942 VTI1BQ9UEU0 232 aa7.3□□□□□ -1.24
UBE3D-205ENST00000503942 IRAK3Q9Y616 596 aa7.3□□□□□ -1.24
UBE3D-205ENST00000503942 HRKO00198 91 aa7.29□□□□□ -1.24
UBE3D-205ENST00000503942 EIF4BP23588 611 aaKnown RBP7.29□□□□□ -1.24
UBE3D-205ENST00000503942 PANK1Q8TE04 598 aa7.29□□□□□ -1.24
UBE3D-205ENST00000503942 LINC01599Q8WXQ3 324 aa7.29□□□□□ -1.24
UBE3D-205ENST00000503942 DACT3Q96B18 629 aaPredicted RBP7.29□□□□□ -1.24
UBE3D-205ENST00000503942 MBD1Q9UIS9 605 aaPredicted RBP7.29□□□□□ -1.24
UBE3D-205ENST00000503942 OR14I1A6ND48 311 aa7.28□□□□□ -1.24
UBE3D-205ENST00000503942 OTOL1A6NHN0 477 aaPredicted RBP7.28□□□□□ -1.24
UBE3D-205ENST00000503942 NOTOA8MTQ0 251 aa7.28□□□□□ -1.24
UBE3D-205ENST00000503942 GALK1P51570 392 aa7.28□□□□□ -1.24
UBE3D-205ENST00000503942 AGMOQ6ZNB7 445 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms