RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 GTF3C3Q9Y5Q9 886 aa29.67■■■□□ 2.34
LSM6-202ENST00000502781 GPR25O00155 361 aa29.66■■■□□ 2.34
LSM6-202ENST00000502781 KRT23Q9C075 422 aa29.66■■■□□ 2.34
LSM6-202ENST00000502781 ASCC2Q9H1I8 757 aaPredicted RBP29.66■■■□□ 2.34
LSM6-202ENST00000502781 PNMA3Q9UL41 463 aa29.66■■■□□ 2.34
LSM6-202ENST00000502781 B4E1Z4 1266 aa29.65■■■□□ 2.34
LSM6-202ENST00000502781 KDM4AO75164 1064 aa29.65■■■□□ 2.34
LSM6-202ENST00000502781 PRDM10Q9NQV6 1147 aa29.65■■■□□ 2.34
LSM6-202ENST00000502781 E7EWF7 191 aa29.64■■■□□ 2.34
LSM6-202ENST00000502781 SLC27A2O14975 620 aa29.64■■■□□ 2.34
LSM6-202ENST00000502781 CREB3L3Q68CJ9 461 aa29.64■■■□□ 2.34
LSM6-202ENST00000502781 C17orf99Q6UX52 265 aa29.64■■■□□ 2.34
LSM6-202ENST00000502781 STOX1Q6ZVD7 989 aa29.64■■■□□ 2.34
LSM6-202ENST00000502781 GOPCQ9HD26 462 aa29.64■■■□□ 2.34
LSM6-202ENST00000502781 ZSWIM5Q9P217 1185 aa29.64■■■□□ 2.34
LSM6-202ENST00000502781 USP17L15C9J2P7 530 aa29.64■■■□□ 2.33
LSM6-202ENST00000502781 USP17L13C9JLJ4 530 aa29.64■■■□□ 2.33
LSM6-202ENST00000502781 USP17L11C9JVI0 530 aa29.64■■■□□ 2.33
LSM6-202ENST00000502781 USP17L18D6R9N7 530 aa29.64■■■□□ 2.33
LSM6-202ENST00000502781 USP17L22D6RA61 530 aa29.64■■■□□ 2.33
LSM6-202ENST00000502781 USP17L17D6RBQ6 530 aa29.64■■■□□ 2.33
LSM6-202ENST00000502781 USP17L19D6RCP7 530 aa29.64■■■□□ 2.33
LSM6-202ENST00000502781 USP17L20D6RJB6 530 aa29.64■■■□□ 2.33
LSM6-202ENST00000502781 USP17L24Q0WX57 530 aa29.64■■■□□ 2.33
LSM6-202ENST00000502781 CATSPERGQ6ZRH7 1159 aa29.64■■■□□ 2.33
LSM6-202ENST00000502781 EPB41L2O43491 1005 aaKnown RBP29.63■■■□□ 2.33
LSM6-202ENST00000502781 REC8O95072 547 aa29.63■■■□□ 2.33
LSM6-202ENST00000502781 OSBPP22059 807 aa29.63■■■□□ 2.33
LSM6-202ENST00000502781 RCSD1Q6JBY9 416 aa29.63■■■□□ 2.33
LSM6-202ENST00000502781 GMCL1P1Q8NEA9 526 aa29.63■■■□□ 2.33
LSM6-202ENST00000502781 RPAP3Q9H6T3 665 aaPredicted RBP29.63■■■□□ 2.33
LSM6-202ENST00000502781 STX8Q9UNK0 236 aa29.63■■■□□ 2.33
LSM6-202ENST00000502781 F5H6K3 240 aa29.62■■■□□ 2.33
LSM6-202ENST00000502781 WDR46O15213 610 aaKnown RBP29.62■■■□□ 2.33
LSM6-202ENST00000502781 KLRC3Q07444 240 aa29.62■■■□□ 2.33
LSM6-202ENST00000502781 SPICE1Q8N0Z3 855 aa29.62■■■□□ 2.33
LSM6-202ENST00000502781 ZNF296Q8WUU4 475 aaPredicted RBP29.62■■■□□ 2.33
LSM6-202ENST00000502781 TTC14Q96N46 770 aa29.62■■■□□ 2.33
LSM6-202ENST00000502781 BCRP11274 1271 aa29.61■■■□□ 2.33
LSM6-202ENST00000502781 IRX3P78415 501 aaPredicted RBP29.61■■■□□ 2.33
LSM6-202ENST00000502781 TRDNQ13061 729 aa29.61■■■□□ 2.33
LSM6-202ENST00000502781 LRRC47Q8N1G4 583 aaKnown RBP29.61■■■□□ 2.33
LSM6-202ENST00000502781 P2RX7Q99572 595 aaKnown RBP29.61■■■□□ 2.33
LSM6-202ENST00000502781 FKTNO75072 461 aa29.6■■■□□ 2.33
LSM6-202ENST00000502781 NDUFB10O96000 172 aa29.6■■■□□ 2.33
LSM6-202ENST00000502781 IQCA1Q86XH1 822 aa29.6■■■□□ 2.33
LSM6-202ENST00000502781 DGKHQ86XP1 1220 aa29.6■■■□□ 2.33
LSM6-202ENST00000502781 NCOA7Q8NI08 942 aa29.6■■■□□ 2.33
LSM6-202ENST00000502781 SMCR8Q8TEV9 937 aaPredicted RBP29.6■■■□□ 2.33
LSM6-202ENST00000502781 CPA4Q9UI42 421 aa29.6■■■□□ 2.33
LSM6-202ENST00000502781 HERVK_113P62684 666 aa29.59■■■□□ 2.33
LSM6-202ENST00000502781 TSGA10IPQ3SY00 556 aa29.59■■■□□ 2.33
LSM6-202ENST00000502781 CCDC178Q5BJE1 867 aa29.59■■■□□ 2.33
LSM6-202ENST00000502781 RNF20Q5VTR2 975 aa29.59■■■□□ 2.33
LSM6-202ENST00000502781 ANKS1AQ92625 1134 aa29.59■■■□□ 2.33
LSM6-202ENST00000502781 KCNB2Q92953 911 aa29.59■■■□□ 2.33
LSM6-202ENST00000502781 TOP1P11387 765 aaKnown RBP29.58■■■□□ 2.33
LSM6-202ENST00000502781 GCLCP48506 637 aaPredicted RBP29.58■■■□□ 2.33
LSM6-202ENST00000502781 SP3Q02447 781 aa29.58■■■□□ 2.33
LSM6-202ENST00000502781 POTEEQ6S8J3 1075 aa29.58■■■□□ 2.33
LSM6-202ENST00000502781 LBX2Q6XYB7 198 aa29.58■■■□□ 2.33
LSM6-202ENST00000502781 CYB5R4Q7L1T6 521 aa29.58■■■□□ 2.33
LSM6-202ENST00000502781 MB21D2Q8IYB1 491 aaPredicted RBP29.58■■■□□ 2.33
LSM6-202ENST00000502781 ZSCAN10Q96SZ4 725 aaPredicted RBP29.58■■■□□ 2.33
LSM6-202ENST00000502781 TMEM47Q9BQJ4 181 aa29.58■■■□□ 2.33
LSM6-202ENST00000502781 ZKSCAN3Q9BRR0 538 aa29.58■■■□□ 2.33
LSM6-202ENST00000502781 MYH4Q9Y623 1939 aa29.57■■■□□ 2.32
LSM6-202ENST00000502781 HSPA4P34932 840 aa29.56■■■□□ 2.32
LSM6-202ENST00000502781 RALYLQ86SE5 291 aaKnown RBP29.56■■■□□ 2.32
LSM6-202ENST00000502781 RASEFQ8IZ41 740 aa29.56■■■□□ 2.32
LSM6-202ENST00000502781 GTF3C2Q8WUA4 911 aaPredicted RBP29.56■■■□□ 2.32
LSM6-202ENST00000502781 SPDYE16A6NNV3 312 aaPredicted RBP29.55■■■□□ 2.32
LSM6-202ENST00000502781 COG2Q14746 738 aa29.55■■■□□ 2.32
LSM6-202ENST00000502781 FAM83BQ5T0W9 1011 aa29.55■■■□□ 2.32
LSM6-202ENST00000502781 ENAHQ8N8S7 591 aaPredicted RBP29.55■■■□□ 2.32
LSM6-202ENST00000502781 GMCL1Q96IK5 515 aa29.55■■■□□ 2.32
LSM6-202ENST00000502781 TANGO6Q9C0B7 1094 aa29.55■■■□□ 2.32
LSM6-202ENST00000502781 TNKSO95271 1327 aa29.54■■■□□ 2.32
LSM6-202ENST00000502781 MYPNQ86TC9 1320 aa29.54■■■□□ 2.32
LSM6-202ENST00000502781 SEC23AQ15436 765 aa29.54■■■□□ 2.32
LSM6-202ENST00000502781 FAM110CQ1W6H9 321 aa29.54■■■□□ 2.32
LSM6-202ENST00000502781 SLFN13Q68D06 897 aa29.54■■■□□ 2.32
LSM6-202ENST00000502781 NUP88Q99567 741 aaPredicted RBP29.54■■■□□ 2.32
LSM6-202ENST00000502781 USP26Q9BXU7 913 aa29.54■■■□□ 2.32
LSM6-202ENST00000502781 HOXC10Q9NYD6 342 aa29.54■■■□□ 2.32
LSM6-202ENST00000502781 MORF4L1Q9UBU8 362 aa29.54■■■□□ 2.32
LSM6-202ENST00000502781 CASP8AP2Q9UKL3 1982 aa29.54■■■□□ 2.32
LSM6-202ENST00000502781 RAD21O60216 631 aa29.53■■■□□ 2.32
LSM6-202ENST00000502781 ANTXR2P58335 489 aa29.53■■■□□ 2.32
LSM6-202ENST00000502781 ANKRD13CQ8N6S4 541 aa29.53■■■□□ 2.32
LSM6-202ENST00000502781 UBAC1Q9BSL1 405 aa29.53■■■□□ 2.32
LSM6-202ENST00000502781 RBPJLQ9UBG7 517 aa29.53■■■□□ 2.32
LSM6-202ENST00000502781 DSG3P32926 999 aa29.52■■■□□ 2.32
LSM6-202ENST00000502781 LACTBP83111 547 aaPredicted RBP29.52■■■□□ 2.32
LSM6-202ENST00000502781 CAP1Q01518 475 aa29.52■■■□□ 2.32
LSM6-202ENST00000502781 COL9A3Q14050 684 aaPredicted RBP29.52■■■□□ 2.32
LSM6-202ENST00000502781 ERO1AQ96HE7 468 aa29.52■■■□□ 2.32
LSM6-202ENST00000502781 TXNRD2Q9NNW7 524 aa29.52■■■□□ 2.32
LSM6-202ENST00000502781 RLFQ13129 1914 aa29.52■■■□□ 2.32
LSM6-202ENST00000502781 FLOT1O75955 427 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms