RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 IFFO2Q5TF58 517 aa15.68■□□□□ 0.1
SGCA-203ENST00000502555 MIGA2Q7L4E1 593 aa15.68■□□□□ 0.1
SGCA-203ENST00000502555 CLEC10AQ8IUN9 316 aa15.68■□□□□ 0.1
SGCA-203ENST00000502555 LRRC47Q8N1G4 583 aaKnown RBP15.68■□□□□ 0.1
SGCA-203ENST00000502555 PHKBQ93100 1093 aa15.68■□□□□ 0.1
SGCA-203ENST00000502555 DCPSQ96C86 337 aaKnown RBP15.68■□□□□ 0.1
SGCA-203ENST00000502555 GBP4Q96PP9 640 aa15.68■□□□□ 0.1
SGCA-203ENST00000502555 SLC26A6Q9BXS9 759 aa15.68■□□□□ 0.1
SGCA-203ENST00000502555 ATP6V1DQ9Y5K8 247 aa15.68■□□□□ 0.1
SGCA-203ENST00000502555 CNTNAP5Q8WYK1 1306 aa15.67■□□□□ 0.1
SGCA-203ENST00000502555 PHF20L1A8MW92 1017 aa15.67■□□□□ 0.1
SGCA-203ENST00000502555 PLEKHA8P1O95397 391 aa15.67■□□□□ 0.1
SGCA-203ENST00000502555 F13A1P00488 732 aa15.67■□□□□ 0.1
SGCA-203ENST00000502555 ASNSP08243 561 aa15.67■□□□□ 0.1
SGCA-203ENST00000502555 PARP1P09874 1014 aaKnown RBP15.67■□□□□ 0.1
SGCA-203ENST00000502555 PDHBP11177 359 aa15.67■□□□□ 0.1
SGCA-203ENST00000502555 EEF2P13639 858 aaKnown RBP15.67■□□□□ 0.1
SGCA-203ENST00000502555 AKAP17AQ02040 695 aaKnown RBP15.67■□□□□ 0.1
SGCA-203ENST00000502555 SUPT20HL1Q3ZLR7 823 aa15.67■□□□□ 0.1
SGCA-203ENST00000502555 NBPF12Q5TAG4 269 aaPredicted RBP15.67■□□□□ 0.1
SGCA-203ENST00000502555 SULF1Q8IWU6 871 aa15.67■□□□□ 0.1
SGCA-203ENST00000502555 C8orf76Q96K31 380 aa15.67■□□□□ 0.1
SGCA-203ENST00000502555 ALG1Q9BT22 464 aa15.67■□□□□ 0.1
SGCA-203ENST00000502555 ZNF341Q9BYN7 854 aa15.67■□□□□ 0.1
SGCA-203ENST00000502555 MAD2L2Q9UI95 211 aa15.67■□□□□ 0.1
SGCA-203ENST00000502555 SCAF8Q9UPN6 1271 aaKnown RBP15.67■□□□□ 0.1
SGCA-203ENST00000502555 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
SGCA-203ENST00000502555 PRPF3O43395 683 aaKnown RBP15.66■□□□□ 0.1
SGCA-203ENST00000502555 CTNND1O60716 968 aaKnown RBP15.66■□□□□ 0.1
SGCA-203ENST00000502555 SMARCA1P28370 1054 aa15.66■□□□□ 0.1
SGCA-203ENST00000502555 JAG1P78504 1218 aa15.66■□□□□ 0.1
SGCA-203ENST00000502555 ATP2B2Q01814 1243 aa15.66■□□□□ 0.1
SGCA-203ENST00000502555 SHROOM1Q2M3G4 852 aaPredicted RBP15.66■□□□□ 0.1
SGCA-203ENST00000502555 CDC37L1Q7L3B6 337 aa15.66■□□□□ 0.1
SGCA-203ENST00000502555 SRBD1Q8N5C6 995 aaKnown RBP15.66■□□□□ 0.1
SGCA-203ENST00000502555 GMCL1P1Q8NEA9 526 aa15.66■□□□□ 0.1
SGCA-203ENST00000502555 TAF1DQ9H5J8 278 aaPredicted RBP15.66■□□□□ 0.1
SGCA-203ENST00000502555 ARHGEF10LQ9HCE6 1279 aa15.66■□□□□ 0.1
SGCA-203ENST00000502555 WDR90Q96KV7 1748 aa15.65■□□□□ 0.1
SGCA-203ENST00000502555 PPFIA3O75145 1194 aa15.65■□□□□ 0.1
SGCA-203ENST00000502555 TRIM29Q14134 588 aa15.65■□□□□ 0.1
SGCA-203ENST00000502555 GPATCH4Q5T3I0 446 aaKnown RBP15.65■□□□□ 0.1
SGCA-203ENST00000502555 PNMA8AQ86V59 439 aaPredicted RBP15.65■□□□□ 0.1
SGCA-203ENST00000502555 SIAH1Q8IUQ4 282 aa15.65■□□□□ 0.1
SGCA-203ENST00000502555 FBXO18Q8NFZ0 1043 aa15.65■□□□□ 0.1
SGCA-203ENST00000502555 DCAF4Q8WV16 495 aa15.65■□□□□ 0.1
SGCA-203ENST00000502555 SPZ1Q9BXG8 430 aa15.65■□□□□ 0.1
SGCA-203ENST00000502555 SH2D4AQ9H788 454 aa15.65■□□□□ 0.1
SGCA-203ENST00000502555 ZNF112Q9UJU3 913 aa15.65■□□□□ 0.1
SGCA-203ENST00000502555 SCN4AP35499 1836 aa15.64■□□□□ 0.09
SGCA-203ENST00000502555 USP17L5A8MUK1 530 aa15.64■□□□□ 0.09
SGCA-203ENST00000502555 KLRF2D3W0D1 207 aa15.64■□□□□ 0.09
SGCA-203ENST00000502555 ZNF543Q08ER8 600 aa15.64■□□□□ 0.09
SGCA-203ENST00000502555 FOXD4L5Q5VV16 416 aaPredicted RBP15.64■□□□□ 0.09
SGCA-203ENST00000502555 USP17L2Q6R6M4 530 aa15.64■□□□□ 0.09
SGCA-203ENST00000502555 CMTR1Q8N1G2 835 aaKnown RBP15.64■□□□□ 0.09
SGCA-203ENST00000502555 STAG2Q8N3U4 1231 aa15.64■□□□□ 0.09
SGCA-203ENST00000502555 CCDC82Q8N4S0 544 aa15.64■□□□□ 0.09
SGCA-203ENST00000502555 FOXD4L4Q8WXT5 416 aaPredicted RBP15.64■□□□□ 0.09
SGCA-203ENST00000502555 ZSCAN16Q9H4T2 348 aaPredicted RBP15.64■□□□□ 0.09
SGCA-203ENST00000502555 MTMR7Q9Y216 660 aa15.64■□□□□ 0.09
SGCA-203ENST00000502555 XBP1P17861 261 aa15.63■□□□□ 0.09
SGCA-203ENST00000502555 KRT26Q7Z3Y9 468 aa15.63■□□□□ 0.09
SGCA-203ENST00000502555 USP48Q86UV5 1035 aa15.63■□□□□ 0.09
SGCA-203ENST00000502555 GMCL1Q96IK5 515 aa15.63■□□□□ 0.09
SGCA-203ENST00000502555 TMX2Q9Y320 296 aa15.63■□□□□ 0.09
SGCA-203ENST00000502555 V9GY48 417 aaPredicted RBP15.63■□□□□ 0.09
SGCA-203ENST00000502555 SSC5DA1L4H1 1573 aa15.63■□□□□ 0.09
SGCA-203ENST00000502555 DDX11L8A8MPP1 907 aa15.62■□□□□ 0.09
SGCA-203ENST00000502555 POTECB2RU33 542 aa15.62■□□□□ 0.09
SGCA-203ENST00000502555 BAG4O95429 457 aaKnown RBP15.62■□□□□ 0.09
SGCA-203ENST00000502555 RESTQ13127 1097 aa15.62■□□□□ 0.09
SGCA-203ENST00000502555 NFKBIBQ15653 356 aa15.62■□□□□ 0.09
SGCA-203ENST00000502555 PKN1Q16512 942 aa15.62■□□□□ 0.09
SGCA-203ENST00000502555 CCDC96Q2M329 555 aa15.62■□□□□ 0.09
SGCA-203ENST00000502555 SLFN13Q68D06 897 aa15.62■□□□□ 0.09
SGCA-203ENST00000502555 FAM177A1Q8N128 213 aaPredicted RBP15.62■□□□□ 0.09
SGCA-203ENST00000502555 GOPCQ9HD26 462 aa15.62■□□□□ 0.09
SGCA-203ENST00000502555 A0A1W2PRG0 241 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 ADM5C9JUS6 153 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 F5H6K3 240 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 GOLGA6L22H0YM25 854 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 NDUFB10O96000 172 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 GOLGA8HP0CJ92 632 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 SCG2P13521 617 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 MCM4P33991 863 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 SLC1A4P43007 532 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 FOSBP53539 338 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 KLRC3Q07444 240 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 PFKFB3Q16875 520 aaPredicted RBP15.61■□□□□ 0.09
SGCA-203ENST00000502555 NOL9Q5SY16 702 aaKnown RBP15.61■□□□□ 0.09
SGCA-203ENST00000502555 KRT40Q6A162 431 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 RASGRP2Q7LDG7 609 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 SCYL3Q8IZE3 742 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 AIFM3Q96NN9 605 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 WRNIP1Q96S55 665 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 RIOX1Q9H6W3 641 aa15.61■□□□□ 0.09
SGCA-203ENST00000502555 FRMPD2Q68DX3 1309 aaPredicted RBP15.6■□□□□ 0.09
SGCA-203ENST00000502555 CYTH3O43739 400 aa15.6■□□□□ 0.09
SGCA-203ENST00000502555 PTMSP20962 102 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms