RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 ANKRD13CQ8N6S4 541 aa5.4□□□□□ -1.54
MATR3-202ENST00000502422 ANP32BQ92688 251 aaKnown RBP5.4□□□□□ -1.54
MATR3-202ENST00000502422 MRIQ9BWK5 157 aa5.4□□□□□ -1.54
MATR3-202ENST00000502422 C9orf78Q9NZ63 289 aaPredicted RBP5.4□□□□□ -1.54
MATR3-202ENST00000502422 ALPK3Q96L96 1907 aa5.4□□□□□ -1.54
MATR3-202ENST00000502422 A0A1B0GUL6 1792 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 ZNF521Q96K83 1311 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 PRUNE2Q8WUY3 3088 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 SPTLC1O15269 473 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 HMGCRP04035 888 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 MSNP26038 577 aaKnown RBP5.4□□□□□ -1.55
MATR3-202ENST00000502422 DIXDC1Q155Q3 683 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 GRIK5Q16478 980 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 ATP2B3Q16720 1220 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 GPAT2Q6NUI2 795 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 HHIPL2Q6UWX4 724 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 ZSCAN29Q8IWY8 852 aaPredicted RBP5.4□□□□□ -1.55
MATR3-202ENST00000502422 CCDC82Q8N4S0 544 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 PDLIM2Q96JY6 352 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 LBHD1Q9BQE6 289 aaPredicted RBP5.4□□□□□ -1.55
MATR3-202ENST00000502422 ZNF112Q9UJU3 913 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 SUGT1Q9Y2Z0 365 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 PCDHB15Q9Y5E8 787 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 LRRFIP2Q9Y608 721 aaKnown RBP5.4□□□□□ -1.55
MATR3-202ENST00000502422 COL2A1P02458 1487 aaPredicted RBP5.4□□□□□ -1.55
MATR3-202ENST00000502422 DOCK3Q8IZD9 2030 aa5.4□□□□□ -1.55
MATR3-202ENST00000502422 RPAP1Q9BWH6 1393 aaPredicted RBP5.39□□□□□ -1.55
MATR3-202ENST00000502422 MROH5Q6ZUA9 1318 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 A0A0G2JLL6 359 aaPredicted RBP5.39□□□□□ -1.55
MATR3-202ENST00000502422 TK2O00142 265 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 NASPP49321 788 aaPredicted RBP5.39□□□□□ -1.55
MATR3-202ENST00000502422 MOGSQ13724 837 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 TJAP1Q5JTD0 557 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 NOL9Q5SY16 702 aaKnown RBP5.39□□□□□ -1.55
MATR3-202ENST00000502422 SASS6Q6UVJ0 657 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 PRRT2Q7Z6L0 340 aaPredicted RBP5.39□□□□□ -1.55
MATR3-202ENST00000502422 TSR2Q969E8 191 aaKnown RBP5.39□□□□□ -1.55
MATR3-202ENST00000502422 SLC45A1Q9Y2W3 748 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 DNAH12Q6ZR08 3092 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 TRIM75PA6NK02 468 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 GRM8O00222 908 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 KDM4AO75164 1064 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 CLSTN1O94985 981 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 LSM11P83369 360 aaKnown RBP eCLIP5.39□□□□□ -1.55
MATR3-202ENST00000502422 FAM110CQ1W6H9 321 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 METTL24Q5JXM2 366 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 FBXO33Q7Z6M2 555 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 LAPTM4BQ86VI4 370 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 FTSJ3Q8IY81 847 aaKnown RBP5.39□□□□□ -1.55
MATR3-202ENST00000502422 SCYL3Q8IZE3 742 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 TNPO1Q92973 898 aaKnown RBP5.39□□□□□ -1.55
MATR3-202ENST00000502422 HLA-CQ95604 372 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 GUCD1Q96NT3 240 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 PRKAG2Q9UGJ0 569 aa5.39□□□□□ -1.55
MATR3-202ENST00000502422 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.39□□□□□ -1.55
MATR3-202ENST00000502422 HRO43593 1189 aa5.38□□□□□ -1.55
MATR3-202ENST00000502422 PTPRAP18433 802 aa5.38□□□□□ -1.55
MATR3-202ENST00000502422 RFC5P40937 340 aa5.38□□□□□ -1.55
MATR3-202ENST00000502422 CBX1P83916 185 aa5.38□□□□□ -1.55
MATR3-202ENST00000502422 PABPC4Q13310 644 aaKnown RBP eCLIP5.38□□□□□ -1.55
MATR3-202ENST00000502422 CSPP1Q1MSJ5 1256 aa5.38□□□□□ -1.55
MATR3-202ENST00000502422 EPHA10Q5JZY3 1008 aa5.38□□□□□ -1.55
MATR3-202ENST00000502422 ADGRD1Q6QNK2 874 aa5.38□□□□□ -1.55
MATR3-202ENST00000502422 TICAM2Q86XR7 235 aa5.38□□□□□ -1.55
MATR3-202ENST00000502422 CCAR1Q8IX12 1150 aaKnown RBP5.38□□□□□ -1.55
MATR3-202ENST00000502422 WDR66Q8TBY9 1149 aa5.38□□□□□ -1.55
MATR3-202ENST00000502422 ZNF592Q92610 1267 aa5.38□□□□□ -1.55
MATR3-202ENST00000502422 ZFRQ96KR1 1074 aaKnown RBP5.38□□□□□ -1.55
MATR3-202ENST00000502422 PUS3Q9BZE2 481 aaKnown RBP5.38□□□□□ -1.55
MATR3-202ENST00000502422 USP40Q9NVE5 1235 aa5.38□□□□□ -1.55
MATR3-202ENST00000502422 AFG3L2Q9Y4W6 797 aa5.38□□□□□ -1.55
MATR3-202ENST00000502422 DDX60LQ5H9U9 1706 aaKnown RBP5.38□□□□□ -1.55
MATR3-202ENST00000502422 F6X3S4 739 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 IFIT1P09914 478 aaKnown RBP5.37□□□□□ -1.55
MATR3-202ENST00000502422 CYP2B6P20813 491 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 GCLCP48506 637 aaPredicted RBP5.37□□□□□ -1.55
MATR3-202ENST00000502422 GUCA2AQ02747 115 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 QPCTQ16769 361 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 TUSC1Q2TAM9 212 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 PPP2R2DQ66LE6 453 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 CDC42EP5Q6NZY7 148 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 SLC4A10Q6U841 1118 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 TRMT2AQ8IZ69 625 aaKnown RBP5.37□□□□□ -1.55
MATR3-202ENST00000502422 MAFAQ8NHW3 353 aaPredicted RBP5.37□□□□□ -1.55
MATR3-202ENST00000502422 TSC1Q92574 1164 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 CWC22Q9HCG8 908 aaKnown RBP5.37□□□□□ -1.55
MATR3-202ENST00000502422 OGDHLQ9ULD0 1010 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 AGTPBP1Q9UPW5 1226 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 ZKSCAN5Q9Y2L8 839 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 CACNA1FO60840 1977 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 HOXA2O43364 376 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 CTNND1O60716 968 aaKnown RBP5.37□□□□□ -1.55
MATR3-202ENST00000502422 PDE8BO95263 885 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 NFIAQ12857 509 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 TRIM32Q13049 653 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 MCM6Q14566 821 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 RAB3GAP1Q15042 981 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 SKOR2Q2VWA4 1001 aaPredicted RBP5.37□□□□□ -1.55
MATR3-202ENST00000502422 BEND3Q5T5X7 828 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 MYRIPQ8NFW9 859 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms