RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 SLURP2P0DP57 97 aa21.02■□□□□ 0.96
LINC00535-201ENST00000501400 EARS2Q5JPH6 523 aaKnown RBP21.02■□□□□ 0.96
LINC00535-201ENST00000501400 CCDC125Q86Z20 511 aa21.02■□□□□ 0.96
LINC00535-201ENST00000501400 TNFRSF25Q93038 417 aa21.02■□□□□ 0.96
LINC00535-201ENST00000501400 DNAJC18Q9H819 358 aa21.02■□□□□ 0.96
LINC00535-201ENST00000501400 ZNF277Q9NRM2 450 aaPredicted RBP21.02■□□□□ 0.96
LINC00535-201ENST00000501400 SWAP70Q9UH65 585 aa21.02■□□□□ 0.96
LINC00535-201ENST00000501400 A0A1B0GVL5 298 aa21.02■□□□□ 0.95
LINC00535-201ENST00000501400 KRT2P35908 639 aa21.02■□□□□ 0.95
LINC00535-201ENST00000501400 NDUFA8P51970 172 aa21.02■□□□□ 0.95
LINC00535-201ENST00000501400 PIBF1Q8WXW3 757 aa21.02■□□□□ 0.95
LINC00535-201ENST00000501400 EHD4Q9H223 541 aa21.02■□□□□ 0.95
LINC00535-201ENST00000501400 FER1L6Q2WGJ9 1857 aa21.01■□□□□ 0.95
LINC00535-201ENST00000501400 TOP1P11387 765 aaKnown RBP21.01■□□□□ 0.95
LINC00535-201ENST00000501400 RBM5P52756 815 aaKnown RBP eCLIP21.01■□□□□ 0.95
LINC00535-201ENST00000501400 RILPL1Q5EBL4 403 aa21.01■□□□□ 0.95
LINC00535-201ENST00000501400 PPP1R9BQ96SB3 815 aa21.01■□□□□ 0.95
LINC00535-201ENST00000501400 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.01■□□□□ 0.95
LINC00535-201ENST00000501400 MTMR4Q9NYA4 1195 aa21.01■□□□□ 0.95
LINC00535-201ENST00000501400 MTMR7Q9Y216 660 aa21.01■□□□□ 0.95
LINC00535-201ENST00000501400 HLA-DOAP06340 250 aa21■□□□□ 0.95
LINC00535-201ENST00000501400 CCDC192P0DO97 292 aa21■□□□□ 0.95
LINC00535-201ENST00000501400 GNAQP50148 359 aa21■□□□□ 0.95
LINC00535-201ENST00000501400 TYRO3Q06418 890 aa21■□□□□ 0.95
LINC00535-201ENST00000501400 SH3BP5LQ7L8J4 393 aa21■□□□□ 0.95
LINC00535-201ENST00000501400 CLEC10AQ8IUN9 316 aa21■□□□□ 0.95
LINC00535-201ENST00000501400 MRVI1Q9Y6F6 885 aa21■□□□□ 0.95
LINC00535-201ENST00000501400 MYH4Q9Y623 1939 aa21■□□□□ 0.95
LINC00535-201ENST00000501400 DDTLA6NHG4 134 aaPredicted RBP21■□□□□ 0.95
LINC00535-201ENST00000501400 TCP10Q12799 353 aa21■□□□□ 0.95
LINC00535-201ENST00000501400 PCDHB6Q9Y5E3 794 aa21■□□□□ 0.95
LINC00535-201ENST00000501400 ADAMTS3O15072 1205 aa20.99■□□□□ 0.95
LINC00535-201ENST00000501400 NPM3O75607 178 aaKnown RBP20.99■□□□□ 0.95
LINC00535-201ENST00000501400 GOLGA8HP0CJ92 632 aa20.99■□□□□ 0.95
LINC00535-201ENST00000501400 CCDC173Q0VFZ6 552 aa20.99■□□□□ 0.95
LINC00535-201ENST00000501400 CFAP100Q494V2 611 aa20.99■□□□□ 0.95
LINC00535-201ENST00000501400 NOM1Q5C9Z4 860 aaKnown RBP20.99■□□□□ 0.95
LINC00535-201ENST00000501400 RSBN1LQ6PCB5 846 aaPredicted RBP20.99■□□□□ 0.95
LINC00535-201ENST00000501400 LARGE2Q8N3Y3 721 aa20.99■□□□□ 0.95
LINC00535-201ENST00000501400 CABP5Q9NP86 173 aa20.99■□□□□ 0.95
LINC00535-201ENST00000501400 ATF5Q9Y2D1 282 aaPredicted RBP20.99■□□□□ 0.95
LINC00535-201ENST00000501400 KINO60870 393 aaKnown RBP20.98■□□□□ 0.95
LINC00535-201ENST00000501400 CMA1P23946 247 aa20.98■□□□□ 0.95
LINC00535-201ENST00000501400 SHC4Q6S5L8 630 aa20.98■□□□□ 0.95
LINC00535-201ENST00000501400 GPKOWQ92917 476 aaPredicted RBP eCLIP20.98■□□□□ 0.95
LINC00535-201ENST00000501400 GMLQ99445 158 aa20.98■□□□□ 0.95
LINC00535-201ENST00000501400 MTFR1LQ9H019 292 aa20.98■□□□□ 0.95
LINC00535-201ENST00000501400 PSMD14O00487 310 aa20.98■□□□□ 0.95
LINC00535-201ENST00000501400 RAD17O75943 681 aa20.98■□□□□ 0.95
LINC00535-201ENST00000501400 PFKFB1P16118 471 aa20.98■□□□□ 0.95
LINC00535-201ENST00000501400 TGFB2P61812 414 aa20.98■□□□□ 0.95
LINC00535-201ENST00000501400 TYW1BQ6NUM6 668 aa20.98■□□□□ 0.95
LINC00535-201ENST00000501400 USP17L2Q6R6M4 530 aa20.98■□□□□ 0.95
LINC00535-201ENST00000501400 JMYQ8N9B5 988 aa20.98■□□□□ 0.95
LINC00535-201ENST00000501400 PDLIM2Q96JY6 352 aa20.98■□□□□ 0.95
LINC00535-201ENST00000501400 SPZ1Q9BXG8 430 aa20.98■□□□□ 0.95
LINC00535-201ENST00000501400 CPVLQ9H3G5 476 aa20.98■□□□□ 0.95
LINC00535-201ENST00000501400 TDRD3Q9H7E2 651 aaKnown RBP20.98■□□□□ 0.95
LINC00535-201ENST00000501400 KLRF2D3W0D1 207 aa20.97■□□□□ 0.95
LINC00535-201ENST00000501400 WNT7AO00755 349 aa20.97■□□□□ 0.95
LINC00535-201ENST00000501400 VIL1P09327 827 aaKnown RBP20.97■□□□□ 0.95
LINC00535-201ENST00000501400 LRRC47Q8N1G4 583 aaKnown RBP20.97■□□□□ 0.95
LINC00535-201ENST00000501400 PRMT6Q96LA8 375 aaPredicted RBP20.97■□□□□ 0.95
LINC00535-201ENST00000501400 CLIC6Q96NY7 704 aa20.97■□□□□ 0.95
LINC00535-201ENST00000501400 DHX36Q9H2U1 1008 aaKnown RBP20.97■□□□□ 0.95
LINC00535-201ENST00000501400 HPSEQ9Y251 543 aa20.97■□□□□ 0.95
LINC00535-201ENST00000501400 ATRNL1Q5VV63 1379 aa20.97■□□□□ 0.95
LINC00535-201ENST00000501400 COL2A1P02458 1487 aaPredicted RBP20.97■□□□□ 0.95
LINC00535-201ENST00000501400 FAM237AA0A1B0GTK4 181 aa20.96■□□□□ 0.95
LINC00535-201ENST00000501400 FAM196BA6NMK8 535 aa20.96■□□□□ 0.95
LINC00535-201ENST00000501400 PARP1P09874 1014 aaKnown RBP20.96■□□□□ 0.95
LINC00535-201ENST00000501400 PDHBP11177 359 aa20.96■□□□□ 0.95
LINC00535-201ENST00000501400 LZTS2Q9BRK4 669 aa20.96■□□□□ 0.95
LINC00535-201ENST00000501400 BRMS1Q9HCU9 246 aa20.96■□□□□ 0.95
LINC00535-201ENST00000501400 PIM2Q9P1W9 311 aa20.96■□□□□ 0.95
LINC00535-201ENST00000501400 USP17L5A8MUK1 530 aa20.96■□□□□ 0.95
LINC00535-201ENST00000501400 CTAGE5O15320 804 aa20.96■□□□□ 0.95
LINC00535-201ENST00000501400 EIF6P56537 245 aaKnown RBP20.96■□□□□ 0.95
LINC00535-201ENST00000501400 RESP18Q5W5W9 173 aa20.96■□□□□ 0.95
LINC00535-201ENST00000501400 WWC2Q6AWC2 1192 aa20.96■□□□□ 0.95
LINC00535-201ENST00000501400 SH3GLB2Q9NR46 395 aa20.96■□□□□ 0.95
LINC00535-201ENST00000501400 FBXO2Q9UK22 296 aaPredicted RBP20.96■□□□□ 0.95
LINC00535-201ENST00000501400 CUTAO60888 179 aa20.95■□□□□ 0.94
LINC00535-201ENST00000501400 SNHG28P0DPA3 235 aa20.95■□□□□ 0.94
LINC00535-201ENST00000501400 NLRP5P59047 1200 aa20.95■□□□□ 0.94
LINC00535-201ENST00000501400 GRIN1Q05586 938 aa20.95■□□□□ 0.94
LINC00535-201ENST00000501400 SOGA3Q5TF21 947 aa20.95■□□□□ 0.94
LINC00535-201ENST00000501400 ANP32BQ92688 251 aaKnown RBP20.95■□□□□ 0.94
LINC00535-201ENST00000501400 VPS33BQ9H267 617 aa20.95■□□□□ 0.94
LINC00535-201ENST00000501400 POLD1P28340 1107 aa20.94■□□□□ 0.94
LINC00535-201ENST00000501400 SHROOM1Q2M3G4 852 aaPredicted RBP20.94■□□□□ 0.94
LINC00535-201ENST00000501400 UVSSAQ2YD98 709 aa20.94■□□□□ 0.94
LINC00535-201ENST00000501400 KRI1Q8N9T8 703 aaKnown RBP20.94■□□□□ 0.94
LINC00535-201ENST00000501400 PI4KBQ9UBF8 816 aa20.94■□□□□ 0.94
LINC00535-201ENST00000501400 MORC2Q9Y6X9 1032 aaPredicted RBP20.94■□□□□ 0.94
LINC00535-201ENST00000501400 SPDYE2BA6NHP3 402 aa20.94■□□□□ 0.94
LINC00535-201ENST00000501400 STXBP3O00186 592 aa20.94■□□□□ 0.94
LINC00535-201ENST00000501400 TTLL1O95922 423 aa20.94■□□□□ 0.94
LINC00535-201ENST00000501400 SPDYE6P0CI01 402 aa20.94■□□□□ 0.94
LINC00535-201ENST00000501400 PTPREP23469 700 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms