RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 OS9Q13438 667 aaPredicted RBP11.16□□□□□ -0.62
CCDC171-209ENST00000498725 ABCB5Q2M3G0 1257 aa11.16□□□□□ -0.62
CCDC171-209ENST00000498725 CERKLQ49MI3 558 aaPredicted RBP11.16□□□□□ -0.62
CCDC171-209ENST00000498725 CCDC158Q5M9N0 1113 aa11.16□□□□□ -0.62
CCDC171-209ENST00000498725 SYMPKQ92797 1274 aaKnown RBP11.16□□□□□ -0.62
CCDC171-209ENST00000498725 C12orf42Q96LP6 360 aa11.16□□□□□ -0.62
CCDC171-209ENST00000498725 TANGO6Q9C0B7 1094 aa11.16□□□□□ -0.62
CCDC171-209ENST00000498725 TNNQ9UQP3 1299 aa11.16□□□□□ -0.62
CCDC171-209ENST00000498725 PRUNE2Q8WUY3 3088 aa11.15□□□□□ -0.62
CCDC171-209ENST00000498725 A0A0G2JMZ2 1700 aa11.15□□□□□ -0.62
CCDC171-209ENST00000498725 MPHOSPH10O00566 681 aaKnown RBP11.15□□□□□ -0.62
CCDC171-209ENST00000498725 IDH1O75874 414 aaKnown RBP11.15□□□□□ -0.62
CCDC171-209ENST00000498725 HOXC6P09630 235 aa11.15□□□□□ -0.62
CCDC171-209ENST00000498725 EPHB4P54760 987 aa11.15□□□□□ -0.62
CCDC171-209ENST00000498725 TLE2Q04725 743 aa11.15□□□□□ -0.62
CCDC171-209ENST00000498725 LRRC41Q15345 812 aa11.15□□□□□ -0.62
CCDC171-209ENST00000498725 FAM47AQ5JRC9 791 aa11.15□□□□□ -0.62
CCDC171-209ENST00000498725 USP38Q8NB14 1042 aa11.15□□□□□ -0.62
CCDC171-209ENST00000498725 MOV10L1Q9BXT6 1211 aaKnown RBP11.15□□□□□ -0.62
CCDC171-209ENST00000498725 KIAA1683Q9H0B3 1180 aa11.15□□□□□ -0.62
CCDC171-209ENST00000498725 CABP5Q9NP86 173 aa11.15□□□□□ -0.62
CCDC171-209ENST00000498725 PARP14Q460N5 1801 aa11.14□□□□□ -0.63
CCDC171-209ENST00000498725 SEPT4O43236 478 aa11.14□□□□□ -0.63
CCDC171-209ENST00000498725 COBLO75128 1261 aa11.14□□□□□ -0.63
CCDC171-209ENST00000498725 ERCC3P19447 782 aa11.14□□□□□ -0.63
CCDC171-209ENST00000498725 ITGB8P26012 769 aa11.14□□□□□ -0.63
CCDC171-209ENST00000498725 MTX1Q13505 466 aa11.14□□□□□ -0.63
CCDC171-209ENST00000498725 GRIN2CQ14957 1233 aa11.14□□□□□ -0.63
CCDC171-209ENST00000498725 SEPT2Q15019 361 aa11.14□□□□□ -0.63
CCDC171-209ENST00000498725 TNNI3KQ59H18 835 aa11.14□□□□□ -0.63
CCDC171-209ENST00000498725 TATDN1Q6P1N9 297 aa11.14□□□□□ -0.63
CCDC171-209ENST00000498725 NCAPG2Q86XI2 1143 aa11.14□□□□□ -0.63
CCDC171-209ENST00000498725 SERPINB13Q9UIV8 391 aa11.14□□□□□ -0.63
CCDC171-209ENST00000498725 FPGT-TNNI3KV9GXZ4 949 aa11.14□□□□□ -0.63
CCDC171-209ENST00000498725 GBF1Q92538 1859 aa11.14□□□□□ -0.63
CCDC171-209ENST00000498725 PQBP1O60828 265 aaKnown RBP11.13□□□□□ -0.63
CCDC171-209ENST00000498725 PGK1P00558 417 aa11.13□□□□□ -0.63
CCDC171-209ENST00000498725 GNAI2P04899 355 aa11.13□□□□□ -0.63
CCDC171-209ENST00000498725 RAG1P15918 1043 aa11.13□□□□□ -0.63
CCDC171-209ENST00000498725 OLFML2BQ68BL8 750 aa11.13□□□□□ -0.63
CCDC171-209ENST00000498725 MAGEB6Q8N7X4 407 aa11.13□□□□□ -0.63
CCDC171-209ENST00000498725 SPDYE1Q8NFV5 336 aaPredicted RBP11.13□□□□□ -0.63
CCDC171-209ENST00000498725 CLUAP1Q96AJ1 413 aa11.13□□□□□ -0.63
CCDC171-209ENST00000498725 SPATC1LQ9H0A9 340 aa11.13□□□□□ -0.63
CCDC171-209ENST00000498725 CCDC8Q9H0W5 538 aaPredicted RBP11.13□□□□□ -0.63
CCDC171-209ENST00000498725 TNFRSF10AO00220 468 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 POLR3DP05423 398 aaPredicted RBP11.12□□□□□ -0.63
CCDC171-209ENST00000498725 CLTBP09497 229 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 DNAJB2P25686 324 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 SHMT1P34896 483 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 PLCD1P51178 756 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 FPGSQ05932 587 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 COG2Q14746 738 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 SNX17Q15036 470 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 TJAP1Q5JTD0 557 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 LBX2Q6XYB7 198 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 TTC6Q86TZ1 520 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 FRAT1Q92837 279 aaPredicted RBP11.12□□□□□ -0.63
CCDC171-209ENST00000498725 LENG1Q96BZ8 264 aaPredicted RBP11.12□□□□□ -0.63
CCDC171-209ENST00000498725 XPNPEP3Q9NQH7 507 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 TMEM39AQ9NV64 488 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 TLR7Q9NYK1 1049 aaKnown RBP11.12□□□□□ -0.63
CCDC171-209ENST00000498725 TACC3Q9Y6A5 838 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 VCANP13611 3396 aa11.12□□□□□ -0.63
CCDC171-209ENST00000498725 SPTBN5Q9NRC6 3674 aaKnown RBP11.11□□□□□ -0.63
CCDC171-209ENST00000498725 TMEM265A0A087WTH1 108 aa11.11□□□□□ -0.63
CCDC171-209ENST00000498725 A0A1W2PRG0 241 aa11.11□□□□□ -0.63
CCDC171-209ENST00000498725 STRNO43815 780 aa11.11□□□□□ -0.63
CCDC171-209ENST00000498725 BCAR3O75815 825 aa11.11□□□□□ -0.63
CCDC171-209ENST00000498725 PGK2P07205 417 aa11.11□□□□□ -0.63
CCDC171-209ENST00000498725 GUCY1A2P33402 732 aa11.11□□□□□ -0.63
CCDC171-209ENST00000498725 RARSP54136 660 aaKnown RBP11.11□□□□□ -0.63
CCDC171-209ENST00000498725 CCDC85BQ15834 202 aaPredicted RBP11.11□□□□□ -0.63
CCDC171-209ENST00000498725 KIAA1755Q5JYT7 1200 aa11.11□□□□□ -0.63
CCDC171-209ENST00000498725 CCDC129Q6ZRS4 1044 aa11.11□□□□□ -0.63
CCDC171-209ENST00000498725 CLEC10AQ8IUN9 316 aa11.11□□□□□ -0.63
CCDC171-209ENST00000498725 SPICE1Q8N0Z3 855 aa11.11□□□□□ -0.63
CCDC171-209ENST00000498725 ATG4CQ96DT6 458 aa11.11□□□□□ -0.63
CCDC171-209ENST00000498725 MAML3Q96JK9 1138 aa11.11□□□□□ -0.63
CCDC171-209ENST00000498725 SLC5A4Q9NY91 659 aa11.11□□□□□ -0.63
CCDC171-209ENST00000498725 HOXC10Q9NYD6 342 aa11.11□□□□□ -0.63
CCDC171-209ENST00000498725 BAZ2AQ9UIF9 1905 aaKnown RBP11.11□□□□□ -0.63
CCDC171-209ENST00000498725 TCF20Q9UGU0 1960 aaKnown RBP11.1□□□□□ -0.63
CCDC171-209ENST00000498725 A0A1W2PQ45 241 aaPredicted RBP11.1□□□□□ -0.63
CCDC171-209ENST00000498725 A0A1W2PQY0 241 aa11.1□□□□□ -0.63
CCDC171-209ENST00000498725 GRXCR1A8MXD5 290 aa11.1□□□□□ -0.63
CCDC171-209ENST00000498725 SURF6O75683 361 aaKnown RBP11.1□□□□□ -0.63
CCDC171-209ENST00000498725 FLOT1O75955 427 aa11.1□□□□□ -0.63
CCDC171-209ENST00000498725 IGHA2P01877 340 aa11.1□□□□□ -0.63
CCDC171-209ENST00000498725 RARBP10826 455 aa11.1□□□□□ -0.63
CCDC171-209ENST00000498725 TAL1P17542 331 aaPredicted RBP11.1□□□□□ -0.63
CCDC171-209ENST00000498725 BCL11AQ9H165 835 aa11.1□□□□□ -0.63
CCDC171-209ENST00000498725 EHD4Q9H223 541 aa11.1□□□□□ -0.63
CCDC171-209ENST00000498725 ZNF576Q9H609 170 aa11.1□□□□□ -0.63
CCDC171-209ENST00000498725 ANTXR1Q9H6X2 564 aa11.1□□□□□ -0.63
CCDC171-209ENST00000498725 C1orf115Q9H7X2 142 aa11.1□□□□□ -0.63
CCDC171-209ENST00000498725 PHF24Q9UPV7 400 aa11.1□□□□□ -0.63
CCDC171-209ENST00000498725 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.09□□□□□ -0.63
CCDC171-209ENST00000498725 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.09□□□□□ -0.63
CCDC171-209ENST00000498725 RAD21O60216 631 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms