RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 OCSTAMPQ9BR26 566 aa7.1□□□□□ -1.27
SPTA1-209ENST00000498708 LRFN3Q9BTN0 628 aa7.1□□□□□ -1.27
SPTA1-209ENST00000498708 TMEM39BQ9GZU3 492 aa7.1□□□□□ -1.27
SPTA1-209ENST00000498708 MBIPQ9NS73 344 aa7.1□□□□□ -1.27
SPTA1-209ENST00000498708 CSADQ9Y600 493 aa7.1□□□□□ -1.27
SPTA1-209ENST00000498708 PPIL2Q13356 520 aa7.09□□□□□ -1.27
SPTA1-209ENST00000498708 IRF5Q13568 498 aa7.09□□□□□ -1.27
SPTA1-209ENST00000498708 GRIN2CQ14957 1233 aa7.09□□□□□ -1.27
SPTA1-209ENST00000498708 SHHQ15465 462 aa7.09□□□□□ -1.27
SPTA1-209ENST00000498708 CCDC152Q4G0S7 254 aa7.09□□□□□ -1.27
SPTA1-209ENST00000498708 C9orf50Q5SZB4 431 aa7.09□□□□□ -1.27
SPTA1-209ENST00000498708 ANKRD18AQ8IVF6 992 aa7.09□□□□□ -1.27
SPTA1-209ENST00000498708 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.09□□□□□ -1.27
SPTA1-209ENST00000498708 PPM1EQ8WY54 764 aa7.09□□□□□ -1.27
SPTA1-209ENST00000498708 C1QTNF1Q9BXJ1 281 aa7.09□□□□□ -1.27
SPTA1-209ENST00000498708 HYPKQ9NX55 129 aa7.09□□□□□ -1.27
SPTA1-209ENST00000498708 HCN4Q9Y3Q4 1203 aa7.09□□□□□ -1.27
SPTA1-209ENST00000498708 ARAP2Q8WZ64 1704 aa7.09□□□□□ -1.27
SPTA1-209ENST00000498708 FIGNL2A6NMB9 653 aa7.08□□□□□ -1.28
SPTA1-209ENST00000498708 TCP10L2B9ZVM9 353 aa7.08□□□□□ -1.28
SPTA1-209ENST00000498708 APAF1O14727 1248 aa7.08□□□□□ -1.28
SPTA1-209ENST00000498708 RBM5P52756 815 aaKnown RBP eCLIP7.08□□□□□ -1.28
SPTA1-209ENST00000498708 GPAT2Q6NUI2 795 aa7.08□□□□□ -1.28
SPTA1-209ENST00000498708 EPS8L1Q8TE68 723 aa7.08□□□□□ -1.28
SPTA1-209ENST00000498708 ATXN2LQ8WWM7 1075 aaKnown RBP7.08□□□□□ -1.28
SPTA1-209ENST00000498708 EPHX3Q9H6B9 360 aa7.08□□□□□ -1.28
SPTA1-209ENST00000498708 TDRD3Q9H7E2 651 aaKnown RBP7.08□□□□□ -1.28
SPTA1-209ENST00000498708 HMX1Q9NP08 348 aaPredicted RBP7.08□□□□□ -1.28
SPTA1-209ENST00000498708 ZNF70Q9UC06 446 aaPredicted RBP7.08□□□□□ -1.28
SPTA1-209ENST00000498708 OGDHLQ9ULD0 1010 aa7.08□□□□□ -1.28
SPTA1-209ENST00000498708 JAG2Q9Y219 1238 aa7.08□□□□□ -1.28
SPTA1-209ENST00000498708 WDFY4Q6ZS81 3184 aa7.08□□□□□ -1.28
SPTA1-209ENST00000498708 USP34Q70CQ2 3546 aa7.07□□□□□ -1.28
SPTA1-209ENST00000498708 LTBP2Q14767 1821 aa7.07□□□□□ -1.28
SPTA1-209ENST00000498708 SNAP23O00161 211 aa7.07□□□□□ -1.28
SPTA1-209ENST00000498708 PDE8AO60658 829 aa7.07□□□□□ -1.28
SPTA1-209ENST00000498708 HOXB7P09629 217 aa7.07□□□□□ -1.28
SPTA1-209ENST00000498708 COL6A1P12109 1028 aa7.07□□□□□ -1.28
SPTA1-209ENST00000498708 SMAD3P84022 425 aaKnown RBP7.07□□□□□ -1.28
SPTA1-209ENST00000498708 RELBQ01201 579 aa7.07□□□□□ -1.28
SPTA1-209ENST00000498708 TRIM28Q13263 835 aaKnown RBP7.07□□□□□ -1.28
SPTA1-209ENST00000498708 ZBTB38Q8NAP3 1195 aaPredicted RBP7.07□□□□□ -1.28
SPTA1-209ENST00000498708 C8orf58Q8NAV2 365 aa7.07□□□□□ -1.28
SPTA1-209ENST00000498708 WRNIP1Q96S55 665 aa7.07□□□□□ -1.28
SPTA1-209ENST00000498708 LBHD1Q9BQE6 289 aaPredicted RBP7.07□□□□□ -1.28
SPTA1-209ENST00000498708 CD209Q9NNX6 404 aa7.07□□□□□ -1.28
SPTA1-209ENST00000498708 CWC25Q9NXE8 425 aaPredicted RBP7.07□□□□□ -1.28
SPTA1-209ENST00000498708 MYO9BQ13459 2157 aa7.06□□□□□ -1.28
SPTA1-209ENST00000498708 AK9Q5TCS8 1911 aa7.06□□□□□ -1.28
SPTA1-209ENST00000498708 TNPO2O14787 897 aaKnown RBP7.06□□□□□ -1.28
SPTA1-209ENST00000498708 PCCAP05165 728 aaPredicted RBP7.06□□□□□ -1.28
SPTA1-209ENST00000498708 MRE11P49959 708 aa7.06□□□□□ -1.28
SPTA1-209ENST00000498708 GNAI1P63096 354 aa7.06□□□□□ -1.28
SPTA1-209ENST00000498708 PPATQ06203 517 aa7.06□□□□□ -1.28
SPTA1-209ENST00000498708 CCDC155Q8N6L0 562 aa7.06□□□□□ -1.28
SPTA1-209ENST00000498708 TSPYL6Q8N831 410 aa7.06□□□□□ -1.28
SPTA1-209ENST00000498708 NANOS1Q8WY41 292 aaKnown RBP7.06□□□□□ -1.28
SPTA1-209ENST00000498708 TSR2Q969E8 191 aaKnown RBP7.06□□□□□ -1.28
SPTA1-209ENST00000498708 AGBL1Q96MI9 1066 aa7.06□□□□□ -1.28
SPTA1-209ENST00000498708 INSM2Q96T92 566 aaPredicted RBP7.06□□□□□ -1.28
SPTA1-209ENST00000498708 BSDC1Q9NW68 430 aaPredicted RBP7.06□□□□□ -1.28
SPTA1-209ENST00000498708 MAP3K2Q9Y2U5 619 aa7.06□□□□□ -1.28
SPTA1-209ENST00000498708 LEMD3Q9Y2U8 911 aa7.06□□□□□ -1.28
SPTA1-209ENST00000498708 CHD9Q3L8U1 2897 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 PI4KAP2A4QPH2 592 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 ESPNB1AK53 854 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 ERVH48-1M5A8F1 160 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 DDX58O95786 925 aaKnown RBP7.05□□□□□ -1.28
SPTA1-209ENST00000498708 ADH1AP07327 375 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 ZNF853P0CG23 659 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 INPP5BP32019 993 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 CACNB3P54284 484 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 RAB15P59190 212 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 MRPS5P82675 430 aaKnown RBP7.05□□□□□ -1.28
SPTA1-209ENST00000498708 TNFAIP1Q13829 316 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 PDE3AQ14432 1141 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 CWF19L2Q2TBE0 894 aaKnown RBP7.05□□□□□ -1.28
SPTA1-209ENST00000498708 PI4KAP1Q8N8J0 262 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 CCDC191Q8NCU4 936 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 PARK7Q99497 189 aaKnown RBP7.05□□□□□ -1.28
SPTA1-209ENST00000498708 P2RX7Q99572 595 aaKnown RBP7.05□□□□□ -1.28
SPTA1-209ENST00000498708 METTL22Q9BUU2 404 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-209ENST00000498708 GREM2Q9H772 168 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 POLMQ9NP87 494 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-209ENST00000498708 IFT57Q9NWB7 429 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 THEGQ9P2T0 379 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 KCNH4Q9UQ05 1017 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 MAST2Q6P0Q8 1798 aa7.05□□□□□ -1.28
SPTA1-209ENST00000498708 PLXNB2O15031 1838 aa7.04□□□□□ -1.28
SPTA1-209ENST00000498708 SLC35F4A4IF30 521 aa7.04□□□□□ -1.28
SPTA1-209ENST00000498708 FAM86C2PA6NEL3 165 aa7.04□□□□□ -1.28
SPTA1-209ENST00000498708 HMGCRP04035 888 aa7.04□□□□□ -1.28
SPTA1-209ENST00000498708 IGKV5-2P06315 115 aa7.04□□□□□ -1.28
SPTA1-209ENST00000498708 HSP90B1P14625 803 aaKnown RBP7.04□□□□□ -1.28
SPTA1-209ENST00000498708 CTSOP43234 321 aaPredicted RBP7.04□□□□□ -1.28
SPTA1-209ENST00000498708 CTSWP56202 376 aa7.04□□□□□ -1.28
SPTA1-209ENST00000498708 CCDC30Q5VVM6 783 aa7.04□□□□□ -1.28
SPTA1-209ENST00000498708 G2E3Q7L622 706 aa7.04□□□□□ -1.28
SPTA1-209ENST00000498708 DZIP1LQ8IYY4 767 aaKnown RBP7.04□□□□□ -1.28
SPTA1-209ENST00000498708 ZNF592Q92610 1267 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms