RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658		A0A1W2PRG0	241 aa		12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	TSPY3	P0CV98	308 aa		12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	TSPY8	P0CW00	308 aa		12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	HSPD1	P10809	573 aa	Known RBP	12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	PC	P11498	1178 aa	Known RBP	12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	EEF2	P13639	858 aa	Known RBP	12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	NT5C2	P49902	561 aa		12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	ATP2B2	Q01814	1243 aa		12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	COG2	Q14746	738 aa		12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	TTC22	Q5TAA0	569 aa		12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	LBX2	Q6XYB7	198 aa		12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	RPAP3	Q9H6T3	665 aa	Predicted RBP	12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	VCPKMT	Q9H867	229 aa		12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	NYAP2	Q9P242	653 aa		12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	ANAPC4	Q9UJX5	808 aa		12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	RABGAP1	Q9Y3P9	1069 aa		12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	PTCH2	Q9Y6C5	1203 aa		12.49	□□□□□ -0.41
FXR1-222	ENST00000498658	MGAM	O43451	1857 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	HTT	P42858	3142 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	SMIM22	K7EJ46	135 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	WDR46	O15213	610 aa	Known RBP	12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	FGA	P02671	866 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	PDE4A	P27815	886 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	CTGF	P29279	349 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	MAPK4	P31152	587 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	RGS19	P49795	217 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	ERVK-9	P63128	1117 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	ERVK-24	P63145	666 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	CAP1	Q01518	475 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	IRF5	Q13568	498 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	CWC27	Q6UX04	472 aa	Known RBP	12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	SIAH1	Q8IUQ4	282 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	STK11IP	Q8N1F8	1099 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	MB21D1	Q8N884	522 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	RUFY2	Q8WXA3	655 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	TANGO6	Q9C0B7	1094 aa		12.48	□□□□□ -0.41
FXR1-222	ENST00000498658	CENPF	P49454	3210 aa		12.47	□□□□□ -0.41
FXR1-222	ENST00000498658	TTLL1	O95922	423 aa		12.47	□□□□□ -0.41
FXR1-222	ENST00000498658	NEFL	P07196	543 aa		12.47	□□□□□ -0.41
FXR1-222	ENST00000498658	VPS53	Q5VIR6	699 aa		12.47	□□□□□ -0.41
FXR1-222	ENST00000498658	SLAIN1	Q8ND83	568 aa		12.47	□□□□□ -0.41
FXR1-222	ENST00000498658	NEDD1	Q8NHV4	660 aa		12.47	□□□□□ -0.41
FXR1-222	ENST00000498658	MKL1	Q969V6	931 aa		12.47	□□□□□ -0.41
FXR1-222	ENST00000498658	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
FXR1-222	ENST00000498658	RNF41	Q9H4P4	317 aa	Predicted RBP	12.47	□□□□□ -0.41
FXR1-222	ENST00000498658	RBPJL	Q9UBG7	517 aa		12.47	□□□□□ -0.41
FXR1-222	ENST00000498658	CTNNA3	Q9UI47	895 aa		12.47	□□□□□ -0.41
FXR1-222	ENST00000498658	GREB1L	Q9C091	1923 aa	Predicted RBP	12.47	□□□□□ -0.41
FXR1-222	ENST00000498658	PLIN4	Q96Q06	1357 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	RAD50	Q92878	1312 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	IGKV6D-41	A0A0C4DH26	115 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	TSPY2	A6NKD2	308 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	FOXP2	O15409	715 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	ORC4	O43929	436 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	PRDM1	O75626	825 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	FLOT1	O75955	427 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	ECM2	O94769	699 aa	Predicted RBP	12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	FGR	P09769	529 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	GRK4	P32298	578 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	FLT3LG	P49771	235 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	UBXN2A	P68543	259 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	TFAP4	Q01664	338 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	PRKCZ	Q05513	592 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	ZNF589	Q86UQ0	364 aa	Predicted RBP	12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	PXYLP1	Q8TE99	480 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	SOCS4	Q8WXH5	440 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	ZNF333	Q96JL9	665 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	PAGR1	Q9BTK6	254 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	DSCC1	Q9BVC3	393 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	TMEM106C	Q9BVX2	250 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	CWC22	Q9HCG8	908 aa	Known RBP	12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	MTMR4	Q9NYA4	1195 aa		12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
FXR1-222	ENST00000498658	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.45	□□□□□ -0.42
FXR1-222	ENST00000498658		F5H6K3	240 aa		12.45	□□□□□ -0.42
FXR1-222	ENST00000498658	ZNF213	O14771	459 aa		12.45	□□□□□ -0.42
FXR1-222	ENST00000498658	RAD21	O60216	631 aa		12.45	□□□□□ -0.42
FXR1-222	ENST00000498658	GSPT1	P15170	499 aa	Known RBP	12.45	□□□□□ -0.42
FXR1-222	ENST00000498658	KLRC3	Q07444	240 aa		12.45	□□□□□ -0.42
FXR1-222	ENST00000498658	MFSD6	Q6ZSS7	791 aa		12.45	□□□□□ -0.42
FXR1-222	ENST00000498658	CLEC10A	Q8IUN9	316 aa		12.45	□□□□□ -0.42
FXR1-222	ENST00000498658	SPICE1	Q8N0Z3	855 aa		12.45	□□□□□ -0.42
FXR1-222	ENST00000498658	CEP95	Q96GE4	821 aa		12.45	□□□□□ -0.42
FXR1-222	ENST00000498658	NUDT12	Q9BQG2	462 aa		12.45	□□□□□ -0.42
FXR1-222	ENST00000498658	TXNRD2	Q9NNW7	524 aa		12.45	□□□□□ -0.42
FXR1-222	ENST00000498658	CLIP2	Q9UDT6	1046 aa		12.45	□□□□□ -0.42
FXR1-222	ENST00000498658	ZSWIM8	A7E2V4	1837 aa		12.44	□□□□□ -0.42
FXR1-222	ENST00000498658	ADCY3	O60266	1144 aa		12.44	□□□□□ -0.42
FXR1-222	ENST00000498658	RANBP6	O60518	1105 aa	Known RBP	12.44	□□□□□ -0.42
FXR1-222	ENST00000498658	CAPN2	P17655	700 aa		12.44	□□□□□ -0.42
FXR1-222	ENST00000498658	SOX10	P56693	466 aa		12.44	□□□□□ -0.42
FXR1-222	ENST00000498658	MLLT1	Q03111	559 aa	Predicted RBP	12.44	□□□□□ -0.42
FXR1-222	ENST00000498658	CTDSPL2	Q05D32	466 aa		12.44	□□□□□ -0.42
FXR1-222	ENST00000498658	PLEKHH3	Q7Z736	793 aa		12.44	□□□□□ -0.42
FXR1-222	ENST00000498658	TRMT44	Q8IYL2	757 aa	Known RBP	12.44	□□□□□ -0.42
FXR1-222	ENST00000498658	GMCL1P1	Q8NEA9	526 aa		12.44	□□□□□ -0.42
FXR1-222	ENST00000498658	STAG1	Q8WVM7	1258 aa		12.44	□□□□□ -0.42
FXR1-222	ENST00000498658	TOMM22	Q9NS69	142 aa		12.44	□□□□□ -0.42
FXR1-222	ENST00000498658	BIN2	Q9UBW5	565 aa	Predicted RBP	12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms