RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 LOC285556D6RIA3 1793 aa15.2■□□□□ 0.02
HSPG2-213ENST00000498495 TNPO2O14787 897 aaKnown RBP15.19■□□□□ 0.02
HSPG2-213ENST00000498495 COG2Q14746 738 aa15.19■□□□□ 0.02
HSPG2-213ENST00000498495 CCAR1Q8IX12 1150 aaKnown RBP15.19■□□□□ 0.02
HSPG2-213ENST00000498495 SPICE1Q8N0Z3 855 aa15.19■□□□□ 0.02
HSPG2-213ENST00000498495 NEDD1Q8NHV4 660 aa15.19■□□□□ 0.02
HSPG2-213ENST00000498495 RUFY2Q8WXA3 655 aa15.19■□□□□ 0.02
HSPG2-213ENST00000498495 COA7Q96BR5 231 aa15.19■□□□□ 0.02
HSPG2-213ENST00000498495 PAGR1Q9BTK6 254 aa15.19■□□□□ 0.02
HSPG2-213ENST00000498495 TANGO6Q9C0B7 1094 aa15.19■□□□□ 0.02
HSPG2-213ENST00000498495 TOMM22Q9NS69 142 aa15.19■□□□□ 0.02
HSPG2-213ENST00000498495 HOXC10Q9NYD6 342 aa15.19■□□□□ 0.02
HSPG2-213ENST00000498495 RBPJLQ9UBG7 517 aa15.19■□□□□ 0.02
HSPG2-213ENST00000498495 MORF4L1Q9UBU8 362 aa15.19■□□□□ 0.02
HSPG2-213ENST00000498495 CLIP2Q9UDT6 1046 aa15.19■□□□□ 0.02
HSPG2-213ENST00000498495 PTCH2Q9Y6C5 1203 aa15.19■□□□□ 0.02
HSPG2-213ENST00000498495 MYPNQ86TC9 1320 aa15.18■□□□□ 0.02
HSPG2-213ENST00000498495 TSPY2A6NKD2 308 aa15.18■□□□□ 0.02
HSPG2-213ENST00000498495 ZNF213O14771 459 aa15.18■□□□□ 0.02
HSPG2-213ENST00000498495 RANBP6O60518 1105 aaKnown RBP15.18■□□□□ 0.02
HSPG2-213ENST00000498495 HAND2P61296 217 aa15.18■□□□□ 0.02
HSPG2-213ENST00000498495 Q3C1V9 767 aa15.18■□□□□ 0.02
HSPG2-213ENST00000498495 KIAA1755Q5JYT7 1200 aa15.18■□□□□ 0.02
HSPG2-213ENST00000498495 NBPF11Q86T75 865 aa15.18■□□□□ 0.02
HSPG2-213ENST00000498495 RAET1EQ8TD07 263 aa15.18■□□□□ 0.02
HSPG2-213ENST00000498495 CEP95Q96GE4 821 aa15.18■□□□□ 0.02
HSPG2-213ENST00000498495 MTMR4Q9NYA4 1195 aa15.18■□□□□ 0.02
HSPG2-213ENST00000498495 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.18■□□□□ 0.02
HSPG2-213ENST00000498495 RABGAP1Q9Y3P9 1069 aa15.18■□□□□ 0.02
HSPG2-213ENST00000498495 ZMYM6O95789 1325 aa15.17■□□□□ 0.02
HSPG2-213ENST00000498495 IGKV6D-41A0A0C4DH26 115 aa15.17■□□□□ 0.02
HSPG2-213ENST00000498495 F5H6K3 240 aa15.17■□□□□ 0.02
HSPG2-213ENST00000498495 WDR46O15213 610 aaKnown RBP15.17■□□□□ 0.02
HSPG2-213ENST00000498495 PEX10O60683 326 aa15.17■□□□□ 0.02
HSPG2-213ENST00000498495 TTLL1O95922 423 aa15.17■□□□□ 0.02
HSPG2-213ENST00000498495 FGRP09769 529 aa15.17■□□□□ 0.02
HSPG2-213ENST00000498495 CHMLP26374 656 aa15.17■□□□□ 0.02
HSPG2-213ENST00000498495 KLRC3Q07444 240 aa15.17■□□□□ 0.02
HSPG2-213ENST00000498495 SLC9C1Q4G0N8 1177 aa15.17■□□□□ 0.02
HSPG2-213ENST00000498495 RRP12Q5JTH9 1297 aaKnown RBP15.17■□□□□ 0.02
HSPG2-213ENST00000498495 MFSD6Q6ZSS7 791 aa15.17■□□□□ 0.02
HSPG2-213ENST00000498495 MKL1Q969V6 931 aa15.17■□□□□ 0.02
HSPG2-213ENST00000498495 DSCC1Q9BVC3 393 aa15.17■□□□□ 0.02
HSPG2-213ENST00000498495 TXNRD2Q9NNW7 524 aa15.17■□□□□ 0.02
HSPG2-213ENST00000498495 CTNNA3Q9UI47 895 aa15.17■□□□□ 0.02
HSPG2-213ENST00000498495 ORC4O43929 436 aa15.16■□□□□ 0.02
HSPG2-213ENST00000498495 FLOT1O75955 427 aa15.16■□□□□ 0.02
HSPG2-213ENST00000498495 ERVK-9P63128 1117 aa15.16■□□□□ 0.02
HSPG2-213ENST00000498495 ERVK-24P63145 666 aa15.16■□□□□ 0.02
HSPG2-213ENST00000498495 PRKCZQ05513 592 aa15.16■□□□□ 0.02
HSPG2-213ENST00000498495 PPP4R3BQ5MIZ7 849 aa15.16■□□□□ 0.02
HSPG2-213ENST00000498495 LBX2Q6XYB7 198 aa15.16■□□□□ 0.02
HSPG2-213ENST00000498495 RNF41Q9H4P4 317 aaPredicted RBP15.16■□□□□ 0.02
HSPG2-213ENST00000498495 GABRQQ9UN88 632 aa15.16■□□□□ 0.02
HSPG2-213ENST00000498495 SPDYE16A6NNV3 312 aaPredicted RBP15.15■□□□□ 0.02
HSPG2-213ENST00000498495 PCP11498 1178 aaKnown RBP15.15■□□□□ 0.02
HSPG2-213ENST00000498495 DSG3P32926 999 aa15.15■□□□□ 0.02
HSPG2-213ENST00000498495 FLT3LGP49771 235 aa15.15■□□□□ 0.02
HSPG2-213ENST00000498495 CCNA1P78396 465 aa15.15■□□□□ 0.02
HSPG2-213ENST00000498495 IMMTQ16891 758 aaKnown RBP15.15■□□□□ 0.02
HSPG2-213ENST00000498495 AKNAD1Q5T1N1 836 aa15.15■□□□□ 0.02
HSPG2-213ENST00000498495 SAMD1Q6SPF0 538 aaPredicted RBP15.15■□□□□ 0.02
HSPG2-213ENST00000498495 CWC22Q9HCG8 908 aaKnown RBP15.15■□□□□ 0.02
HSPG2-213ENST00000498495 STX8Q9UNK0 236 aa15.15■□□□□ 0.02
HSPG2-213ENST00000498495 TACC3Q9Y6A5 838 aa15.15■□□□□ 0.02
HSPG2-213ENST00000498495 RAD50Q92878 1312 aa15.15■□□□□ 0.02
HSPG2-213ENST00000498495 MAPK4P31152 587 aa15.14■□□□□ 0.01
HSPG2-213ENST00000498495 FAM83BQ5T0W9 1011 aa15.14■□□□□ 0.01
HSPG2-213ENST00000498495 POTEEQ6S8J3 1075 aa15.14■□□□□ 0.01
HSPG2-213ENST00000498495 SKAP1Q86WV1 359 aa15.14■□□□□ 0.01
HSPG2-213ENST00000498495 STAG1Q8WVM7 1258 aa15.14■□□□□ 0.01
HSPG2-213ENST00000498495 ARMC5Q96C12 935 aa15.14■□□□□ 0.01
HSPG2-213ENST00000498495 IL17RBQ9NRM6 502 aa15.14■□□□□ 0.01
HSPG2-213ENST00000498495 BTBD7Q9P203 1132 aa15.14■□□□□ 0.01
HSPG2-213ENST00000498495 SYNPO2Q9UMS6 1093 aa15.14■□□□□ 0.01
HSPG2-213ENST00000498495 ZSWIM8A7E2V4 1837 aa15.13■□□□□ 0.01
HSPG2-213ENST00000498495 CNMDO75829 334 aa15.13■□□□□ 0.01
HSPG2-213ENST00000498495 NDUFB10O96000 172 aa15.13■□□□□ 0.01
HSPG2-213ENST00000498495 GRK4P32298 578 aa15.13■□□□□ 0.01
HSPG2-213ENST00000498495 SOX10P56693 466 aa15.13■□□□□ 0.01
HSPG2-213ENST00000498495 SLFN13Q68D06 897 aa15.13■□□□□ 0.01
HSPG2-213ENST00000498495 LRRC47Q8N1G4 583 aaKnown RBP15.13■□□□□ 0.01
HSPG2-213ENST00000498495 MB21D1Q8N884 522 aa15.13■□□□□ 0.01
HSPG2-213ENST00000498495 SH3TC2Q8TF17 1288 aa15.13■□□□□ 0.01
HSPG2-213ENST00000498495 PORCNQ9H237 461 aa15.13■□□□□ 0.01
HSPG2-213ENST00000498495 IL25Q9H293 177 aa15.13■□□□□ 0.01
HSPG2-213ENST00000498495 BIN2Q9UBW5 565 aaPredicted RBP15.13■□□□□ 0.01
HSPG2-213ENST00000498495 PLIN4Q96Q06 1357 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 SGSM2O43147 1006 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 ADCY3O60266 1144 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 NMT2O60551 498 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 IRF5Q13568 498 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 PLS1Q14651 629 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 WDR78Q5VTH9 848 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 ERICH6BQ5W0A0 696 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 PLEKHH3Q7Z736 793 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 SLAIN1Q8ND83 568 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 GMCL1P1Q8NEA9 526 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 ESR2Q92731 530 aa15.12■□□□□ 0.01
HSPG2-213ENST00000498495 ATG4CQ96DT6 458 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms