RNA–Protein interactions for RNA: ENST00000498460.1

RNF8-208, Transcript of ring finger protein 8, humanhuman

TSL 3

Gene RNF8, Length 835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-208ENST00000498460 TANGO6Q9C0B7 1094 aa11.91□□□□□ -0.5
RNF8-208ENST00000498460 ARHGEF10LQ9HCE6 1279 aa11.91□□□□□ -0.5
RNF8-208ENST00000498460 HOXC10Q9NYD6 342 aa11.91□□□□□ -0.5
RNF8-208ENST00000498460 SLC4A4Q9Y6R1 1079 aa11.91□□□□□ -0.5
RNF8-208ENST00000498460 LAMA3Q16787 3333 aa11.91□□□□□ -0.5
RNF8-208ENST00000498460 CYP2D7A0A087X1C5 515 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 A0A1W2PRG0 241 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 SPDYE16A6NNV3 312 aaPredicted RBP11.9□□□□□ -0.5
RNF8-208ENST00000498460 USP17L12C9JPN9 530 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 USP17L21D6R901 530 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 CNMDO75829 334 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 CHGBP05060 677 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 CACNB2Q08289 660 aaPredicted RBP11.9□□□□□ -0.5
RNF8-208ENST00000498460 MAP2K5Q13163 448 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 COG2Q14746 738 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 CCL14Q16627 93 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 MAP3K21Q5TCX8 1036 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 C12orf60Q5U649 245 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 LBX2Q6XYB7 198 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 NBPF3Q9H094 633 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 SH2D4AQ9H788 454 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 ECHDC1Q9NTX5 307 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 BTBD7Q9P203 1132 aa11.9□□□□□ -0.5
RNF8-208ENST00000498460 RBM27Q9P2N5 1060 aaKnown RBP11.9□□□□□ -0.5
RNF8-208ENST00000498460 LAMA2P24043 3122 aaKnown RBP11.9□□□□□ -0.5
RNF8-208ENST00000498460 A0A0G2JMZ2 1700 aa11.89□□□□□ -0.51
RNF8-208ENST00000498460 SLC15A5A6NIM6 579 aa11.89□□□□□ -0.51
RNF8-208ENST00000498460 AKR1B1P15121 316 aa11.89□□□□□ -0.51
RNF8-208ENST00000498460 PTPREP23469 700 aa11.89□□□□□ -0.51
RNF8-208ENST00000498460 CDK8P49336 464 aa11.89□□□□□ -0.51
RNF8-208ENST00000498460 ATP2B2Q01814 1243 aa11.89□□□□□ -0.51
RNF8-208ENST00000498460 ICA1Q05084 483 aa11.89□□□□□ -0.51
RNF8-208ENST00000498460 MFSD14CQ5VZR4 134 aa11.89□□□□□ -0.51
RNF8-208ENST00000498460 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
RNF8-208ENST00000498460 CCDC17Q96LX7 622 aa11.89□□□□□ -0.51
RNF8-208ENST00000498460 PUS7LQ9H0K6 701 aaKnown RBP11.89□□□□□ -0.51
RNF8-208ENST00000498460 DCTPP1Q9H773 170 aa11.89□□□□□ -0.51
RNF8-208ENST00000498460 OGDHLQ9ULD0 1010 aa11.89□□□□□ -0.51
RNF8-208ENST00000498460 FLOT1O75955 427 aa11.88□□□□□ -0.51
RNF8-208ENST00000498460 CCND3P30281 292 aaPredicted RBP11.88□□□□□ -0.51
RNF8-208ENST00000498460 PLS1Q14651 629 aa11.88□□□□□ -0.51
RNF8-208ENST00000498460 C16orf86Q6ZW13 317 aa11.88□□□□□ -0.51
RNF8-208ENST00000498460 CLEC10AQ8IUN9 316 aa11.88□□□□□ -0.51
RNF8-208ENST00000498460 SPICE1Q8N0Z3 855 aa11.88□□□□□ -0.51
RNF8-208ENST00000498460 LPAR1Q92633 364 aa11.88□□□□□ -0.51
RNF8-208ENST00000498460 C11orf49Q9H6J7 331 aa11.88□□□□□ -0.51
RNF8-208ENST00000498460 TMX2Q9Y320 296 aa11.88□□□□□ -0.51
RNF8-208ENST00000498460 ZNF236Q9UL36 1845 aa11.88□□□□□ -0.51
RNF8-208ENST00000498460 GREB1LQ9C091 1923 aaPredicted RBP11.88□□□□□ -0.51
RNF8-208ENST00000498460 SMIM22K7EJ46 135 aa11.87□□□□□ -0.51
RNF8-208ENST00000498460 RAD21O60216 631 aa11.87□□□□□ -0.51
RNF8-208ENST00000498460 CNGA1P29973 690 aa11.87□□□□□ -0.51
RNF8-208ENST00000498460 HOXD11P31277 338 aaPredicted RBP11.87□□□□□ -0.51
RNF8-208ENST00000498460 KIAA1755Q5JYT7 1200 aa11.87□□□□□ -0.51
RNF8-208ENST00000498460 CTR9Q6PD62 1173 aa11.87□□□□□ -0.51
RNF8-208ENST00000498460 DPP9Q86TI2 863 aa11.87□□□□□ -0.51
RNF8-208ENST00000498460 C7orf61Q8IZ16 206 aa11.87□□□□□ -0.51
RNF8-208ENST00000498460 MB21D1Q8N884 522 aa11.87□□□□□ -0.51
RNF8-208ENST00000498460 KBTBD3Q8NAB2 608 aa11.87□□□□□ -0.51
RNF8-208ENST00000498460 MOV10L1Q9BXT6 1211 aaKnown RBP11.87□□□□□ -0.51
RNF8-208ENST00000498460 SPATC1LQ9H0A9 340 aa11.87□□□□□ -0.51
RNF8-208ENST00000498460 VCPKMTQ9H867 229 aa11.87□□□□□ -0.51
RNF8-208ENST00000498460 STRNO43815 780 aa11.86□□□□□ -0.51
RNF8-208ENST00000498460 EEF2P13639 858 aaKnown RBP11.86□□□□□ -0.51
RNF8-208ENST00000498460 DSG3P32926 999 aa11.86□□□□□ -0.51
RNF8-208ENST00000498460 GRB14Q14449 540 aa11.86□□□□□ -0.51
RNF8-208ENST00000498460 TSHZ3Q63HK5 1081 aa11.86□□□□□ -0.51
RNF8-208ENST00000498460 SIAH1Q8IUQ4 282 aa11.86□□□□□ -0.51
RNF8-208ENST00000498460 STK11IPQ8N1F8 1099 aa11.86□□□□□ -0.51
RNF8-208ENST00000498460 STRBPQ96SI9 672 aaKnown RBP11.86□□□□□ -0.51
RNF8-208ENST00000498460 KANSL2Q9H9L4 492 aa11.86□□□□□ -0.51
RNF8-208ENST00000498460 GOPCQ9HD26 462 aa11.86□□□□□ -0.51
RNF8-208ENST00000498460 FLRT1Q9NZU1 646 aa11.86□□□□□ -0.51
RNF8-208ENST00000498460 ARPP21Q9UBL0 812 aaPredicted RBP11.86□□□□□ -0.51
RNF8-208ENST00000498460 STAP2Q9UGK3 403 aa11.86□□□□□ -0.51
RNF8-208ENST00000498460 MINDY4BA8MYZ0 360 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 WDR46O15213 610 aaKnown RBP11.85□□□□□ -0.51
RNF8-208ENST00000498460 RNF113AO15541 343 aaKnown RBP11.85□□□□□ -0.51
RNF8-208ENST00000498460 APPP05067 770 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 HOXC6P09630 235 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 ERCC3P19447 782 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 ADORA2AP29274 412 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 CYP2C19P33261 490 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
RNF8-208ENST00000498460 LRRFIP1Q32MZ4 808 aaKnown RBP11.85□□□□□ -0.51
RNF8-208ENST00000498460 LHX8Q68G74 356 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 NCAPG2Q86XI2 1143 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 SHCBP1Q8NEM2 672 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 NPLOC4Q8TAT6 608 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 APPBP2Q92624 585 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 ATG4CQ96DT6 458 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 MROH8Q9H579 483 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 MKNK2Q9HBH9 465 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 SLC5A4Q9NY91 659 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 ZMYND8Q9ULU4 1186 aaPredicted RBP11.85□□□□□ -0.51
RNF8-208ENST00000498460 MCM3APO60318 1980 aa11.85□□□□□ -0.51
RNF8-208ENST00000498460 COL6A3P12111 3177 aa11.84□□□□□ -0.51
RNF8-208ENST00000498460 GSG1L2A8MUP6 293 aa11.84□□□□□ -0.51
RNF8-208ENST00000498460 ERC2O15083 957 aa11.84□□□□□ -0.51
RNF8-208ENST00000498460 MSCO60682 206 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms