RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 UNC93B1Q9H1C4 597 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 RPAP3Q9H6T3 665 aaPredicted RBP10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 ARHGEF10LQ9HCE6 1279 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 GJD2Q9UKL4 321 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 GSG1L2A8MUP6 293 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 GPAA1O43292 621 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 HMGCRP04035 888 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 GNAT2P19087 354 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 ICA1Q05084 483 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 HDAC1Q13547 482 aaPredicted RBP10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 SBK1Q52WX2 424 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 ANKRD45Q5TZF3 282 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 GIMAP6Q6P9H5 292 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 POTEEQ6S8J3 1075 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 SOCS4Q8WXH5 440 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 NUDT12Q9BQG2 462 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 FSD1Q9BTV5 496 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 SH2D4AQ9H788 454 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 RABGAP1Q9Y3P9 1069 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 ZNF236Q9UL36 1845 aa10.16□□□□□ -0.78
HMGXB4-207ENST00000498212 ALPK3Q96L96 1907 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 PLXNA1Q9UIW2 1896 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 SALL3Q9BXA9 1300 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 SPDYE16A6NNV3 312 aaPredicted RBP10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 M0R2C6 588 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 CNMDO75829 334 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 SGPL1O95470 568 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 CYP2B6P20813 491 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 CCNA1P78396 465 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 AAMPQ13685 434 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 LBX2Q6XYB7 198 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 GPR142Q7Z601 462 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 CLEC10AQ8IUN9 316 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 U2AF1L4Q8WU68 220 aaKnown RBP10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 LPAR1Q92633 364 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 TANGO6Q9C0B7 1094 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 PORCNQ9H237 461 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 CWC22Q9HCG8 908 aaKnown RBP10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 TMX2Q9Y320 296 aa10.15□□□□□ -0.78
HMGXB4-207ENST00000498212 MKI67P46013 3256 aaKnown RBP10.15□□□□□ -0.79
HMGXB4-207ENST00000498212 ROBO3Q96MS0 1386 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 MINDY4BA8MYZ0 360 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 PATL2C9JE40 543 aaKnown RBP10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 APPP05067 770 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 XRCC5P13010 732 aaKnown RBP10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 TDO2P48775 406 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 COG2Q14746 738 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 KIAA1755Q5JYT7 1200 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 WDR78Q5VTH9 848 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 PLEKHH3Q7Z736 793 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 SIAH1Q8IUQ4 282 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 STK11IPQ8N1F8 1099 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 TRIB2Q92519 343 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 VCPKMTQ9H867 229 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 KANSL2Q9H9L4 492 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 MKNK2Q9HBH9 465 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 EPB41L4AQ9HCS5 686 aaPredicted RBP10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 PAK6Q9NQU5 681 aaPredicted RBP10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 BTBD7Q9P203 1132 aa10.14□□□□□ -0.79
HMGXB4-207ENST00000498212 RPTORQ8N122 1335 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 TFRCP02786 760 aaKnown RBP10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 EEF2P13639 858 aaKnown RBP10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 ZKSCAN1P17029 563 aaPredicted RBP10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 CAPN2P17655 700 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 RGS2P41220 211 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 ATP2B2Q01814 1243 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 TRIM32Q13049 653 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 ZMYM1Q5SVZ6 1142 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 MORN1Q5T089 497 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 TRMT44Q8IYL2 757 aaKnown RBP10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 IFNL3Q8IZI9 196 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 SPICE1Q8N0Z3 855 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 USP6NLQ92738 828 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 DEFB118Q96PH6 123 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 SEC62Q99442 399 aaKnown RBP10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 APBA2Q99767 749 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 HMX1Q9NP08 348 aaPredicted RBP10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 HOXC10Q9NYD6 342 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 STAP2Q9UGK3 403 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 IVNS1ABPQ9Y6Y0 642 aa10.13□□□□□ -0.79
HMGXB4-207ENST00000498212 SLC15A5A6NIM6 579 aa10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 WDR46O15213 610 aaKnown RBP10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 FLOT1O75955 427 aa10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 FARP2O94887 1054 aaPredicted RBP10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 RASA1P20936 1047 aa10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 PDE1AP54750 535 aa10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 MAP2K5Q13163 448 aa10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 UBE2Q1Q7Z7E8 422 aa10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 MB21D1Q8N884 522 aa10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 EVI5LQ96CN4 794 aa10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 HTATIP2Q9BUP3 242 aa10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 NACAP1Q9BZK3 213 aa10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 NAPBQ9H115 298 aa10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 RWDD1Q9H446 243 aaPredicted RBP10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 ZNF287Q9HBT7 754 aa10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 GOPCQ9HD26 462 aa10.12□□□□□ -0.79
HMGXB4-207ENST00000498212 RAD21O60216 631 aa10.11□□□□□ -0.79
HMGXB4-207ENST00000498212 PTPREP23469 700 aa10.11□□□□□ -0.79
HMGXB4-207ENST00000498212 CCL14Q16627 93 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms