RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 B4E1Z4 1266 aa18.84■□□□□ 0.61
SSBP1-214ENST00000498107 MCCP23508 829 aa18.84■□□□□ 0.61
SSBP1-214ENST00000498107 HOXA7P31268 230 aaPredicted RBP18.84■□□□□ 0.61
SSBP1-214ENST00000498107 CTCFP49711 727 aaPredicted RBP18.84■□□□□ 0.61
SSBP1-214ENST00000498107 MYH4Q9Y623 1939 aa18.84■□□□□ 0.61
SSBP1-214ENST00000498107 IRX3P78415 501 aaPredicted RBP18.83■□□□□ 0.6
SSBP1-214ENST00000498107 KRT32Q14532 448 aa18.83■□□□□ 0.6
SSBP1-214ENST00000498107 TREML2Q5T2D2 321 aa18.83■□□□□ 0.6
SSBP1-214ENST00000498107 UBAC1Q9BSL1 405 aa18.83■□□□□ 0.6
SSBP1-214ENST00000498107 IL17RBQ9NRM6 502 aa18.83■□□□□ 0.6
SSBP1-214ENST00000498107 USP17L15C9J2P7 530 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 USP17L13C9JLJ4 530 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 USP17L11C9JVI0 530 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 USP17L18D6R9N7 530 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 USP17L22D6RA61 530 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 USP17L17D6RBQ6 530 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 USP17L19D6RCP7 530 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 USP17L20D6RJB6 530 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 WDR46O15213 610 aaKnown RBP18.82■□□□□ 0.6
SSBP1-214ENST00000498107 VCAM1P19320 739 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 NOVP48745 357 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 USP17L24Q0WX57 530 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 CRHR2Q13324 411 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 SART3Q15020 963 aaKnown RBP18.82■□□□□ 0.6
SSBP1-214ENST00000498107 TSGA10IPQ3SY00 556 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 NOM1Q5C9Z4 860 aaKnown RBP18.82■□□□□ 0.6
SSBP1-214ENST00000498107 DGKHQ86XP1 1220 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 GMCL1P1Q8NEA9 526 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 ZSWIM5Q9P217 1185 aa18.82■□□□□ 0.6
SSBP1-214ENST00000498107 ERICH2A1L162 156 aa18.81■□□□□ 0.6
SSBP1-214ENST00000498107 F5H6K3 240 aa18.81■□□□□ 0.6
SSBP1-214ENST00000498107 FOXN1O15353 648 aa18.81■□□□□ 0.6
SSBP1-214ENST00000498107 RAD21O60216 631 aa18.81■□□□□ 0.6
SSBP1-214ENST00000498107 NMT2O60551 498 aa18.81■□□□□ 0.6
SSBP1-214ENST00000498107 TLR2O60603 784 aa18.81■□□□□ 0.6
SSBP1-214ENST00000498107 TBC1D8O95759 1140 aa18.81■□□□□ 0.6
SSBP1-214ENST00000498107 TOP1P11387 765 aaKnown RBP18.81■□□□□ 0.6
SSBP1-214ENST00000498107 HSPA4P34932 840 aa18.81■□□□□ 0.6
SSBP1-214ENST00000498107 KLRC3Q07444 240 aa18.81■□□□□ 0.6
SSBP1-214ENST00000498107 SMCR8Q8TEV9 937 aaPredicted RBP18.81■□□□□ 0.6
SSBP1-214ENST00000498107 GTF3C2Q8WUA4 911 aaPredicted RBP18.81■□□□□ 0.6
SSBP1-214ENST00000498107 ZSCAN10Q96SZ4 725 aaPredicted RBP18.81■□□□□ 0.6
SSBP1-214ENST00000498107 DGKZQ13574 1117 aa18.8■□□□□ 0.6
SSBP1-214ENST00000498107 MTA3Q9BTC8 594 aa18.8■□□□□ 0.6
SSBP1-214ENST00000498107 ASCC2Q9H1I8 757 aaPredicted RBP18.8■□□□□ 0.6
SSBP1-214ENST00000498107 RPAP3Q9H6T3 665 aaPredicted RBP18.8■□□□□ 0.6
SSBP1-214ENST00000498107 MCM5P33992 734 aa18.79■□□□□ 0.6
SSBP1-214ENST00000498107 GCLCP48506 637 aaPredicted RBP18.79■□□□□ 0.6
SSBP1-214ENST00000498107 COL13A1Q5TAT6 717 aaPredicted RBP18.79■□□□□ 0.6
SSBP1-214ENST00000498107 CATSPERGQ6ZRH7 1159 aa18.79■□□□□ 0.6
SSBP1-214ENST00000498107 STOX1Q6ZVD7 989 aa18.79■□□□□ 0.6
SSBP1-214ENST00000498107 SPICE1Q8N0Z3 855 aa18.79■□□□□ 0.6
SSBP1-214ENST00000498107 LRRC47Q8N1G4 583 aaKnown RBP18.79■□□□□ 0.6
SSBP1-214ENST00000498107 ANKS1AQ92625 1134 aa18.79■□□□□ 0.6
SSBP1-214ENST00000498107 KCNB2Q92953 911 aa18.79■□□□□ 0.6
SSBP1-214ENST00000498107 USP26Q9BXU7 913 aa18.79■□□□□ 0.6
SSBP1-214ENST00000498107 TANGO6Q9C0B7 1094 aa18.79■□□□□ 0.6
SSBP1-214ENST00000498107 TNKSO95271 1327 aa18.78■□□□□ 0.6
SSBP1-214ENST00000498107 GPR25O00155 361 aa18.78■□□□□ 0.6
SSBP1-214ENST00000498107 NDUFB10O96000 172 aa18.78■□□□□ 0.6
SSBP1-214ENST00000498107 HMGB1P09429 215 aaKnown RBP18.78■□□□□ 0.6
SSBP1-214ENST00000498107 CYP2C8P10632 490 aa18.78■□□□□ 0.6
SSBP1-214ENST00000498107 HSPA8P11142 646 aaKnown RBP18.78■□□□□ 0.6
SSBP1-214ENST00000498107 SLFN13Q68D06 897 aa18.78■□□□□ 0.6
SSBP1-214ENST00000498107 MB21D2Q8IYB1 491 aaPredicted RBP18.78■□□□□ 0.6
SSBP1-214ENST00000498107 NEK1Q96PY6 1258 aa18.78■□□□□ 0.6
SSBP1-214ENST00000498107 TMEM47Q9BQJ4 181 aa18.78■□□□□ 0.6
SSBP1-214ENST00000498107 ZKSCAN3Q9BRR0 538 aa18.78■□□□□ 0.6
SSBP1-214ENST00000498107 KAT14Q9H8E8 782 aa18.78■□□□□ 0.6
SSBP1-214ENST00000498107 HOXC10Q9NYD6 342 aa18.78■□□□□ 0.6
SSBP1-214ENST00000498107 TAF6LQ9Y6J9 622 aa18.78■□□□□ 0.6
SSBP1-214ENST00000498107 IFIT3O14879 490 aaKnown RBP18.77■□□□□ 0.6
SSBP1-214ENST00000498107 COG2Q14746 738 aa18.77■□□□□ 0.6
SSBP1-214ENST00000498107 IFIT1BQ5T764 474 aaKnown RBP18.77■□□□□ 0.6
SSBP1-214ENST00000498107 RCSD1Q6JBY9 416 aa18.77■□□□□ 0.6
SSBP1-214ENST00000498107 CYB5R4Q7L1T6 521 aa18.77■□□□□ 0.6
SSBP1-214ENST00000498107 ENAHQ8N8S7 591 aaPredicted RBP18.77■□□□□ 0.6
SSBP1-214ENST00000498107 GMCL1Q96IK5 515 aa18.77■□□□□ 0.6
SSBP1-214ENST00000498107 TSKSQ9UJT2 592 aa18.77■□□□□ 0.6
SSBP1-214ENST00000498107 MYPNQ86TC9 1320 aa18.76■□□□□ 0.59
SSBP1-214ENST00000498107 FKTNO75072 461 aa18.76■□□□□ 0.59
SSBP1-214ENST00000498107 FLOT1O75955 427 aa18.76■□□□□ 0.59
SSBP1-214ENST00000498107 BMP3P12645 472 aa18.76■□□□□ 0.59
SSBP1-214ENST00000498107 PSMA5P28066 241 aa18.76■□□□□ 0.59
SSBP1-214ENST00000498107 SLC1A4P43007 532 aa18.76■□□□□ 0.59
SSBP1-214ENST00000498107 HERVK_113P62684 666 aa18.76■□□□□ 0.59
SSBP1-214ENST00000498107 KIAA1755Q5JYT7 1200 aa18.76■□□□□ 0.59
SSBP1-214ENST00000498107 FAM83BQ5T0W9 1011 aa18.76■□□□□ 0.59
SSBP1-214ENST00000498107 C17orf99Q6UX52 265 aa18.76■□□□□ 0.59
SSBP1-214ENST00000498107 RASEFQ8IZ41 740 aa18.76■□□□□ 0.59
SSBP1-214ENST00000498107 DCAF4Q8WV16 495 aa18.76■□□□□ 0.59
SSBP1-214ENST00000498107 TMEM87BQ96K49 555 aa18.76■□□□□ 0.59
SSBP1-214ENST00000498107 P2RX7Q99572 595 aaKnown RBP18.76■□□□□ 0.59
SSBP1-214ENST00000498107 WDR19Q8NEZ3 1342 aa18.75■□□□□ 0.59
SSBP1-214ENST00000498107 LBX1P52954 281 aa18.75■□□□□ 0.59
SSBP1-214ENST00000498107 SP3Q02447 781 aa18.75■□□□□ 0.59
SSBP1-214ENST00000498107 WTAPQ15007 396 aa18.75■□□□□ 0.59
SSBP1-214ENST00000498107 ARHGEF6Q15052 776 aa18.75■□□□□ 0.59
SSBP1-214ENST00000498107 LBX2Q6XYB7 198 aa18.75■□□□□ 0.59
SSBP1-214ENST00000498107 TMTC2Q8N394 836 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms