RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	BUB1B	O60566	1050 aa	Predicted RBP	11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TUBB2A	Q13885	445 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CPLX4	Q7Z7G2	160 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	RNPC3	Q96LT9	517 aa	Known RBP	11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TUBB2B	Q9BVA1	445 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	DSCC1	Q9BVC3	393 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	FAM184B	Q9ULE4	1060 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	NFU1	Q9UMS0	254 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597		A0A1B0GTH6	734 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	FAM205C	A6NFA0	338 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	PDE2A	O00408	941 aa	Predicted RBP	11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	BUB1	O43683	1085 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	GPT	P24298	496 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	COPB1	P53618	953 aa	Known RBP	11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TUBB4B	P68371	445 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	PTPN12	Q05209	780 aa	Known RBP	11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	LRRC24	Q50LG9	513 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ANKRD13D	Q6ZTN6	518 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	KLHL7	Q8IXQ5	586 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CCDC113	Q9H0I3	377 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ANGEL1	Q9UNK9	670 aa	Known RBP	11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	GUCY1A2	P33402	732 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	GUCY2D	Q02846	1103 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TTF1	Q15361	905 aa	Predicted RBP	11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	OR8K1	Q8NGG5	319 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	SLC40A1	Q9NP59	571 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TTC26	A0AVF1	554 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TRIM49B	A6NDI0	452 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	NEURL1B	A8MQ27	555 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	KCNJ18	B7U540	433 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	UPP2	O95045	317 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CP	P00450	1065 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	MTIF2	P46199	727 aa	Known RBP	11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	KCNJ12	Q14500	433 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TDRD12	Q587J7	1177 aa	Known RBP	11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	NBPF14	Q5TI25	921 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	HIBCH	Q6NVY1	386 aa	Predicted RBP	11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	NOSTRIN	Q8IVI9	506 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TSEN2	Q8NCE0	465 aa	Known RBP	11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CALR3	Q96L12	384 aa	Known RBP	11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CCDC42	Q96M95	316 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	MLXIP	Q9HAP2	919 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	HELLS	Q9NRZ9	838 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ADD3	Q9UEY8	706 aa	Known RBP	11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	HPS5	Q9UPZ3	1129 aa		11.88	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	MET	P08581	1390 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CCDC189	A1A4V9	331 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	GOLGA8K	D6RF30	607 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	AGPS	O00116	658 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	GPAA1	O43292	621 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	PPP6R2	O75170	966 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	PRDM1	O75626	825 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CYLC1	P35663	651 aa	Predicted RBP	11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ARID5A	Q03989	594 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	MYO1E	Q12965	1108 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ARMC3	Q5W041	872 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TYW1B	Q6NUM6	668 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	NFRKB	Q6P4R8	1299 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CCDC13	Q8IYE1	715 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	NELFB	Q8WX92	580 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	LACRT	Q9GZZ8	138 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ZBTB3	Q9H5J0	574 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	SETD1B	Q9UPS6	1966 aa	Known RBP	11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	OPLAH	O14841	1288 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	MOCS3	O95396	460 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ZNF18	P17022	549 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ZMYM1	Q5SVZ6	1142 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	NAA35	Q5VZE5	725 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TTC5	Q8N0Z6	440 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	OXER1	Q8TDS5	423 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	MIEF2	Q96C03	454 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	MED15	Q96RN5	788 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	PUS3	Q9BZE2	481 aa	Known RBP	11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	HAUS4	Q9H6D7	363 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	IGSF1	Q8N6C5	1336 aa		11.87	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ZMYM6	O95789	1325 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	NR1D1	P20393	614 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	LSP1	P33241	339 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	MORC3	Q14149	939 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	PTPA	Q15257	358 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ZNF473	Q8WTR7	871 aa	Known RBP	11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	SPDL1	Q96EA4	605 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	PUS7L	Q9H0K6	701 aa	Known RBP	11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	EPB41L5	Q9HCM4	733 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	LRWD1	Q9UFC0	647 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	HPSE	Q9Y251	543 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	GDA	Q9Y2T3	454 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TLDC2	A0PJX2	215 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ERICH2	A1L162	156 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ANKRD18B	A2A2Z9	1011 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TACC1	O75410	805 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ADORA1	P30542	326 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CTDSPL2	Q05D32	466 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CCDC178	Q5BJE1	867 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	WDR93	Q6P2C0	686 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	OR2W6P	Q8NHA6	318 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	ZIM3	Q96PE6	472 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CCT8L2	Q96SF2	557 aa		11.86	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TANGO6	Q9C0B7	1094 aa		11.86	□□□□□ -0.51

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