RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 XRCC5P13010 732 aaKnown RBP13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 EEF2P13639 858 aaKnown RBP13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 PDE4AP27815 886 aa13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 COG2Q14746 738 aa13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 VPS53Q5VIR6 699 aa13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 B4GALNT3Q6L9W6 998 aa13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 UBE2Q1Q7Z7E8 422 aa13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 SH3TC2Q8TF17 1288 aa13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 PORCNQ9H237 461 aa13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 HOXC10Q9NYD6 342 aa13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 ZBTB47Q9UFB7 747 aaPredicted RBP13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 TACC3Q9Y6A5 838 aa13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 CEP290O15078 2479 aa13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 A0A0D9SFI3 127 aa13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 PEX10O60683 326 aa13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 CAPN2P17655 700 aa13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 ICA1Q05084 483 aa13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 MCMDC2Q4G0Z9 681 aa13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 MORN1Q5T089 497 aa13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 CLEC10AQ8IUN9 316 aa13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 NEDD1Q8NHV4 660 aa13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 COA7Q96BR5 231 aa13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 FAM227BQ96M60 508 aa13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 NACAP1Q9BZK3 213 aa13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 RPAP3Q9H6T3 665 aaPredicted RBP13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 BTBD7Q9P203 1132 aa13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 A0A0G2JMZ2 1700 aa13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 PARP14Q460N5 1801 aa13.02□□□□□ -0.33
SHROOM3-210ENST00000497440 DNAH12Q6ZR08 3092 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 MINDY4BA8MYZ0 360 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 MPHOSPH10O00566 681 aaKnown RBP13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 WDR46O15213 610 aaKnown RBP13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 ADCY3O60266 1144 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 FGAP02671 866 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 GJB1P08034 283 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 HOXC6P09630 235 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 SDSP20132 328 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 MAPK4P31152 587 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 DSG3P32926 999 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 PPARAQ07869 468 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 MTFR1Q15390 333 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 MAP3K21Q5TCX8 1036 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 CCDC129Q6ZRS4 1044 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 ZNF589Q86UQ0 364 aaPredicted RBP13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 RAET1EQ8TD07 263 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 FEZ1Q99689 392 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 SH2D4AQ9H788 454 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 ARHGEF10LQ9HCE6 1279 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 MTMR4Q9NYA4 1195 aa13.01□□□□□ -0.33
SHROOM3-210ENST00000497440 ORC4O43929 436 aa13□□□□□ -0.33
SHROOM3-210ENST00000497440 HSPD1P10809 573 aaKnown RBP13□□□□□ -0.33
SHROOM3-210ENST00000497440 EN2P19622 333 aaPredicted RBP13□□□□□ -0.33
SHROOM3-210ENST00000497440 GJA8P48165 433 aa13□□□□□ -0.33
SHROOM3-210ENST00000497440 TDO2P48775 406 aa13□□□□□ -0.33
SHROOM3-210ENST00000497440 ZYXQ15942 572 aaKnown RBP13□□□□□ -0.33
SHROOM3-210ENST00000497440 MB21D1Q8N884 522 aa13□□□□□ -0.33
SHROOM3-210ENST00000497440 SHCBP1Q8NEM2 672 aa13□□□□□ -0.33
SHROOM3-210ENST00000497440 REPS2Q8NFH8 660 aa13□□□□□ -0.33
SHROOM3-210ENST00000497440 NAPBQ9H115 298 aa13□□□□□ -0.33
SHROOM3-210ENST00000497440 MKNK2Q9HBH9 465 aa13□□□□□ -0.33
SHROOM3-210ENST00000497440 PAK6Q9NQU5 681 aaPredicted RBP13□□□□□ -0.33
SHROOM3-210ENST00000497440 NMIQ13287 307 aaPredicted RBP12.99□□□□□ -0.33
SHROOM3-210ENST00000497440 GPR142Q7Z601 462 aa12.99□□□□□ -0.33
SHROOM3-210ENST00000497440 ZNF444Q8N0Y2 327 aaPredicted RBP12.99□□□□□ -0.33
SHROOM3-210ENST00000497440 SOCS4Q8WXH5 440 aa12.99□□□□□ -0.33
SHROOM3-210ENST00000497440 SHISA4Q96DD7 197 aa12.99□□□□□ -0.33
SHROOM3-210ENST00000497440 TMEM106CQ9BVX2 250 aa12.99□□□□□ -0.33
SHROOM3-210ENST00000497440 CRISPLD2Q9H0B8 497 aa12.99□□□□□ -0.33
SHROOM3-210ENST00000497440 IL17RBQ9NRM6 502 aa12.99□□□□□ -0.33
SHROOM3-210ENST00000497440 F5H6K3 240 aa12.98□□□□□ -0.33
SHROOM3-210ENST00000497440 APPP05067 770 aa12.98□□□□□ -0.33
SHROOM3-210ENST00000497440 CCL5P13501 91 aa12.98□□□□□ -0.33
SHROOM3-210ENST00000497440 GSPT1P15170 499 aaKnown RBP12.98□□□□□ -0.33
SHROOM3-210ENST00000497440 PTPREP23469 700 aa12.98□□□□□ -0.33
SHROOM3-210ENST00000497440 PDE4BQ07343 736 aa12.98□□□□□ -0.33
SHROOM3-210ENST00000497440 KLRC3Q07444 240 aa12.98□□□□□ -0.33
SHROOM3-210ENST00000497440 GRB14Q14449 540 aa12.98□□□□□ -0.33
SHROOM3-210ENST00000497440 PLEKHH3Q7Z736 793 aa12.98□□□□□ -0.33
SHROOM3-210ENST00000497440 GMCL1P1Q8NEA9 526 aa12.98□□□□□ -0.33
SHROOM3-210ENST00000497440 CEP95Q96GE4 821 aa12.98□□□□□ -0.33
SHROOM3-210ENST00000497440 MOV10L1Q9BXT6 1211 aaKnown RBP12.98□□□□□ -0.33
SHROOM3-210ENST00000497440 NBPF3Q9H094 633 aa12.98□□□□□ -0.33
SHROOM3-210ENST00000497440 TCP11L1Q9NUJ3 509 aa12.98□□□□□ -0.33
SHROOM3-210ENST00000497440 CCDC171Q6TFL3 1326 aa12.97□□□□□ -0.33
SHROOM3-210ENST00000497440 ATP2A1O14983 1001 aa12.97□□□□□ -0.33
SHROOM3-210ENST00000497440 STRNO43815 780 aa12.97□□□□□ -0.33
SHROOM3-210ENST00000497440 PLA2G6O60733 806 aa12.97□□□□□ -0.33
SHROOM3-210ENST00000497440 PRDM1O75626 825 aa12.97□□□□□ -0.33
SHROOM3-210ENST00000497440 INHAP05111 366 aa12.97□□□□□ -0.33
SHROOM3-210ENST00000497440 PCP11498 1178 aaKnown RBP12.97□□□□□ -0.33
SHROOM3-210ENST00000497440 ELNP15502 786 aa12.97□□□□□ -0.33
SHROOM3-210ENST00000497440 NT5C2P49902 561 aa12.97□□□□□ -0.33
SHROOM3-210ENST00000497440 UBXN2AP68543 259 aa12.97□□□□□ -0.33
SHROOM3-210ENST00000497440 CCNA1P78396 465 aa12.97□□□□□ -0.33
SHROOM3-210ENST00000497440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.97□□□□□ -0.33
SHROOM3-210ENST00000497440 ABRAQ8N0Z2 381 aa12.97□□□□□ -0.33
SHROOM3-210ENST00000497440 NUDT12Q9BQG2 462 aa12.97□□□□□ -0.33
SHROOM3-210ENST00000497440 SPATC1LQ9H0A9 340 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms