RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PLD2O14939 933 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 DIAPH1O60610 1272 aaKnown RBP3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 EYA4O95677 639 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 HCLS1P14317 486 aaPredicted RBP3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 GUCY2CP25092 1073 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 CDKN1CP49918 316 aaPredicted RBP3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 PPP2R3AQ06190 1150 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 IDI1Q13907 227 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 BRDTQ58F21 947 aaPredicted RBP3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 TRIM61Q5EBN2 209 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 TMEM201Q5SNT2 666 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 ODR4Q5SWX8 454 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 GORABQ5T7V8 394 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 ZNF697Q5TEC3 545 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 CDCP2Q5VXM1 449 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 SPATC1Q76KD6 591 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 PTF1AQ7RTS3 328 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 NECAB2Q7Z6G3 386 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 FERMT3Q86UX7 667 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 FAM178BQ8IXR5 827 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 EXOC8Q8IYI6 725 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 ZBTB38Q8NAP3 1195 aaPredicted RBP3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 TMEM40Q8WWA1 233 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 TTC9Q92623 222 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 GMCL1Q96IK5 515 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 FERD3LQ96RJ6 166 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 CRBNQ96SW2 442 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 KIF2CQ99661 725 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 MDFIQ99750 246 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 ORAI3Q9BRQ5 295 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 POLR3GLQ9BT43 218 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 EMILIN2Q9BXX0 1053 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 PBX4Q9BYU1 374 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 CLEC4MQ9H2X3 399 aaPredicted RBP3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 BRMS1Q9HCU9 246 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 KANSL3Q9P2N6 904 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 SOX13Q9UN79 622 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 PCDHB5Q9Y5E4 795 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 PCDHGC4Q9Y5F7 938 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 CD2APQ9Y5K6 639 aa3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 CFAP65Q6ZU64 1925 aaKnown RBP3.31□□□□□ -1.88
CKS1BP2-201ENST00000497342 PREX2Q70Z35 1606 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 TROQ12816 1431 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 KIAA1107Q9UPP5 1409 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 SPATA31A1Q5TZJ5 1347 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 SPATA31A3Q5VYP0 1347 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 PDE2AO00408 941 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 PRC1O43663 620 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 FBXO24O75426 580 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 SASH3O75995 380 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 AVPP01185 164 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 PSAPP07602 524 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 RARAP10276 462 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 TARSP26639 723 aaKnown RBP3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 ARNTP27540 789 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 CCNFP41002 786 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 PCSK7Q16549 785 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 SPRED3Q2MJR0 410 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 ARSJQ5FYB0 599 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 CCDC81Q6ZN84 652 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 EEPD1Q7L9B9 569 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 TTC6Q86TZ1 520 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 FMNL3Q8IVF7 1028 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 NIM1KQ8IY84 436 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 LRRC47Q8N1G4 583 aaKnown RBP3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 CACTIN-AS1Q8N1I8 211 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 CHAC2Q8WUX2 184 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 JDP2Q8WYK2 163 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 BSNDQ8WZ55 320 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 PMM1Q92871 262 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 HHIPQ96QV1 700 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 SPATA9Q9BWV2 254 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 MRPL4Q9BYD3 311 aaKnown RBP3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 NRSN2Q9GZP1 204 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 PHAXQ9H814 394 aaKnown RBP3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 NCOA5Q9HCD5 579 aaKnown RBP3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 KRT82Q9NSB4 513 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 MAST4O15021 2626 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 EPG5Q9HCE0 2579 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 VIRMAQ69YN4 1812 aaKnown RBP3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 NRAPQ86VF7 1730 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 PTPN23Q9H3S7 1636 aa3.3□□□□□ -1.88
CKS1BP2-201ENST00000497342 FYCO1Q9BQS8 1478 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 ERBB4Q15303 1308 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 LAMA3Q16787 3333 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 IQCA1LA6NCM1 817 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 F6X3S4 739 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 K7ESF4 209 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 TSPAN6O43657 245 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 ASMTLO95671 621 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 FAM153BP0C7A2 387 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 ACRP10323 421 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 ACPPP15309 386 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 SOX5P35711 763 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 GNALP38405 381 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 PHKA2P46019 1235 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 SMCPP49901 116 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 MCL1Q07820 350 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 SSRP1Q08945 709 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms