RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 SQSTM1Q13501 440 aa7.44□□□□□ -1.22
SOX2-OT-216ENST00000497122 RASGRF1Q13972 1273 aa7.44□□□□□ -1.22
SOX2-OT-216ENST00000497122 FXNQ16595 210 aa7.44□□□□□ -1.22
SOX2-OT-216ENST00000497122 KIF4BQ2VIQ3 1234 aa7.44□□□□□ -1.22
SOX2-OT-216ENST00000497122 DIEXFQ68CQ4 756 aaKnown RBP7.44□□□□□ -1.22
SOX2-OT-216ENST00000497122 JDP2Q8WYK2 163 aa7.44□□□□□ -1.22
SOX2-OT-216ENST00000497122 NECAB3Q96P71 396 aaPredicted RBP7.44□□□□□ -1.22
SOX2-OT-216ENST00000497122 FEZ1Q99689 392 aa7.44□□□□□ -1.22
SOX2-OT-216ENST00000497122 KRT82Q9NSB4 513 aa7.44□□□□□ -1.22
SOX2-OT-216ENST00000497122 TMEM260Q9NX78 707 aa7.44□□□□□ -1.22
SOX2-OT-216ENST00000497122 KDM2BQ8NHM5 1336 aa7.44□□□□□ -1.22
SOX2-OT-216ENST00000497122 ITGB5P18084 799 aa7.43□□□□□ -1.22
SOX2-OT-216ENST00000497122 CD96P40200 585 aa7.43□□□□□ -1.22
SOX2-OT-216ENST00000497122 GIPRP48546 466 aa7.43□□□□□ -1.22
SOX2-OT-216ENST00000497122 TKFCQ3LXA3 575 aa7.43□□□□□ -1.22
SOX2-OT-216ENST00000497122 C2orf27AQ580R0 203 aa7.43□□□□□ -1.22
SOX2-OT-216ENST00000497122 KIAA0907Q7Z7F0 614 aaPredicted RBP7.43□□□□□ -1.22
SOX2-OT-216ENST00000497122 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.43□□□□□ -1.22
SOX2-OT-216ENST00000497122 TOP6BLQ8N6T0 577 aa7.43□□□□□ -1.22
SOX2-OT-216ENST00000497122 STAG1Q8WVM7 1258 aa7.43□□□□□ -1.22
SOX2-OT-216ENST00000497122 MISP3Q96FF7 219 aa7.43□□□□□ -1.22
SOX2-OT-216ENST00000497122 TNKS2Q9H2K2 1166 aa7.43□□□□□ -1.22
SOX2-OT-216ENST00000497122 SLC52A1Q9NWF4 448 aa7.43□□□□□ -1.22
SOX2-OT-216ENST00000497122 PCOLCE2Q9UKZ9 415 aa7.43□□□□□ -1.22
SOX2-OT-216ENST00000497122 BIN1O00499 593 aa7.42□□□□□ -1.22
SOX2-OT-216ENST00000497122 GJB6O95452 261 aa7.42□□□□□ -1.22
SOX2-OT-216ENST00000497122 ASMTLO95671 621 aa7.42□□□□□ -1.22
SOX2-OT-216ENST00000497122 BPNT1O95861 308 aa7.42□□□□□ -1.22
SOX2-OT-216ENST00000497122 PDGFRBP09619 1106 aa7.42□□□□□ -1.22
SOX2-OT-216ENST00000497122 MPP2Q14168 576 aa7.42□□□□□ -1.22
SOX2-OT-216ENST00000497122 C21orf62-AS1Q17RA5 79 aa7.42□□□□□ -1.22
SOX2-OT-216ENST00000497122 LSRQ86X29 649 aaPredicted RBP7.42□□□□□ -1.22
SOX2-OT-216ENST00000497122 OR6P1Q8NGX9 317 aa7.42□□□□□ -1.22
SOX2-OT-216ENST00000497122 STK35Q8TDR2 534 aa7.42□□□□□ -1.22
SOX2-OT-216ENST00000497122 ZNF526Q8TF50 670 aaPredicted RBP7.42□□□□□ -1.22
SOX2-OT-216ENST00000497122 GATAD2BQ8WXI9 593 aa7.42□□□□□ -1.22
SOX2-OT-216ENST00000497122 RC3H2Q9HBD1 1191 aaKnown RBP7.42□□□□□ -1.22
SOX2-OT-216ENST00000497122 BRMS1Q9HCU9 246 aa7.42□□□□□ -1.22
SOX2-OT-216ENST00000497122 B2RBV5 119 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 NEFMP07197 916 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 CD8BP10966 210 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 ARNTP27540 789 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 MASP1P48740 699 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 RPS26P62854 115 aaKnown RBP7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 ODR4Q5SWX8 454 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 PDZD3Q86UT5 571 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 FERMT3Q86UX7 667 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 FMNL3Q8IVF7 1028 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 ISL2Q96A47 359 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 CEP89Q96ST8 783 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 PCDHGC5Q9Y5F6 944 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 CSADQ9Y600 493 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 PTCH2Q9Y6C5 1203 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 U3KQE9 123 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 ROBO2Q9HCK4 1378 aa7.41□□□□□ -1.22
SOX2-OT-216ENST00000497122 DIAPH1O60610 1272 aaKnown RBP7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 MAP4K4O95819 1239 aaPredicted RBP7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 CLCQ05315 142 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 SSRP1Q08945 709 aaKnown RBP7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 FZD5Q13467 585 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 TCEA2Q15560 299 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 IFI16Q16666 785 aaKnown RBP7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 AOC3Q16853 763 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 PI4K2BQ8TCG2 481 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 GPBAR1Q8TDU6 330 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 THAP3Q8WTV1 239 aaPredicted RBP7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 CCDC136Q96JN2 1154 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 HRASLS5Q96KN8 279 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 DUSP23Q9BVJ7 150 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 EMILIN2Q9BXX0 1053 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 LRRC3Q9BY71 257 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 TMX1Q9H3N1 280 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 HOMER2Q9NSB8 354 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 GABBR1Q9UBS5 961 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 FAN1Q9Y2M0 1017 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 SAMM50Q9Y512 469 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 CD2APQ9Y5K6 639 aa7.4□□□□□ -1.22
SOX2-OT-216ENST00000497122 TPD52L2O43399 206 aaKnown RBP7.39□□□□□ -1.23
SOX2-OT-216ENST00000497122 PEX14O75381 377 aa7.39□□□□□ -1.23
SOX2-OT-216ENST00000497122 PAPLNO95428 1278 aa7.39□□□□□ -1.23
SOX2-OT-216ENST00000497122 C8AP07357 584 aa7.39□□□□□ -1.23
SOX2-OT-216ENST00000497122 NME2P22392 152 aa7.39□□□□□ -1.23
SOX2-OT-216ENST00000497122 EVA1CP58658 441 aa7.39□□□□□ -1.23
SOX2-OT-216ENST00000497122 C6orf15Q6UXA7 325 aaPredicted RBP7.39□□□□□ -1.23
SOX2-OT-216ENST00000497122 SPATC1Q76KD6 591 aa7.39□□□□□ -1.23
SOX2-OT-216ENST00000497122 REC114Q7Z4M0 266 aa7.39□□□□□ -1.23
SOX2-OT-216ENST00000497122 ZNRF3Q9ULT6 936 aa7.39□□□□□ -1.23
SOX2-OT-216ENST00000497122 RIPOR2Q9Y4F9 1068 aa7.39□□□□□ -1.23
SOX2-OT-216ENST00000497122 GRIN3BO60391 1043 aa7.38□□□□□ -1.23
SOX2-OT-216ENST00000497122 CEACAM5P06731 702 aa7.38□□□□□ -1.23
SOX2-OT-216ENST00000497122 PRKCQQ04759 706 aa7.38□□□□□ -1.23
SOX2-OT-216ENST00000497122 ZC3H12AQ5D1E8 599 aaKnown RBP7.38□□□□□ -1.23
SOX2-OT-216ENST00000497122 RUFY4Q6ZNE9 571 aa7.38□□□□□ -1.23
SOX2-OT-216ENST00000497122 MYH16Q9H6N6 1097 aa7.38□□□□□ -1.23
SOX2-OT-216ENST00000497122 VAV3Q9UKW4 847 aa7.38□□□□□ -1.23
SOX2-OT-216ENST00000497122 PCDHB14Q9Y5E9 798 aa7.38□□□□□ -1.23
SOX2-OT-216ENST00000497122 CCDC194A0A1B0GVG4 234 aa7.37□□□□□ -1.23
SOX2-OT-216ENST00000497122 PLEKHD1A6NEE1 506 aa7.37□□□□□ -1.23
SOX2-OT-216ENST00000497122 DCDC2CA8MYV0 355 aa7.37□□□□□ -1.23
SOX2-OT-216ENST00000497122 IMPDH2P12268 514 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms