RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 ERC2O15083 957 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 CCL5P13501 91 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 RRP1P56182 461 aaKnown RBP9.42□□□□□ -0.9
SRRM1-220ENST00000496882 HERVK_113P62684 666 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 USP17L24Q0WX57 530 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 IRF5Q13568 498 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 GPRC5AQ8NFJ5 357 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 PXYLP1Q8TE99 480 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 GCC1Q96CN9 775 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 YTHDC1Q96MU7 727 aaKnown RBP9.42□□□□□ -0.9
SRRM1-220ENST00000496882 PAGR1Q9BTK6 254 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 DCTPP1Q9H773 170 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 SH2D4AQ9H788 454 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 DCP1AQ9NPI6 582 aaPredicted RBP9.42□□□□□ -0.9
SRRM1-220ENST00000496882 GABRQQ9UN88 632 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 CDK5RAP2Q96SN8 1893 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 ZSWIM8A7E2V4 1837 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 SIPA1L1O43166 1804 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 LOC285556D6RIA3 1793 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 NAV1Q8NEY1 1877 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 ATMINO43313 823 aaPredicted RBP9.41□□□□□ -0.9
SRRM1-220ENST00000496882 GLRX3O76003 335 aaKnown RBP9.41□□□□□ -0.9
SRRM1-220ENST00000496882 INHAP05111 366 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 CAPN2P17655 700 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 MAPK4P31152 587 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 SHMT1P34896 483 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 PLCD1P51178 756 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 CCNA1P78396 465 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 JAG1P78504 1218 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 MTFR1Q15390 333 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 TMEM179Q6ZVK1 233 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 OXER1Q8TDS5 423 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 SOCS4Q8WXH5 440 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 DDX12PQ92771 950 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 C12orf42Q96LP6 360 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 P2RX7Q99572 595 aaKnown RBP9.41□□□□□ -0.9
SRRM1-220ENST00000496882 KIAA1683Q9H0B3 1180 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 ARHGEF10LQ9HCE6 1279 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 MORF4L1Q9UBU8 362 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 SLC4A4Q9Y6R1 1079 aa9.41□□□□□ -0.9
SRRM1-220ENST00000496882 RBBP6Q7Z6E9 1792 aaKnown RBP9.41□□□□□ -0.9
SRRM1-220ENST00000496882 HMGCRP04035 888 aa9.4□□□□□ -0.9
SRRM1-220ENST00000496882 GJB1P08034 283 aa9.4□□□□□ -0.9
SRRM1-220ENST00000496882 ZFYP08048 801 aaPredicted RBP9.4□□□□□ -0.9
SRRM1-220ENST00000496882 ELNP15502 786 aa9.4□□□□□ -0.9
SRRM1-220ENST00000496882 ERVK-9P63128 1117 aa9.4□□□□□ -0.9
SRRM1-220ENST00000496882 ERVK-24P63145 666 aa9.4□□□□□ -0.9
SRRM1-220ENST00000496882 SEPT2Q15019 361 aa9.4□□□□□ -0.9
SRRM1-220ENST00000496882 SHROOM1Q2M3G4 852 aaPredicted RBP9.4□□□□□ -0.9
SRRM1-220ENST00000496882 WDR78Q5VTH9 848 aa9.4□□□□□ -0.9
SRRM1-220ENST00000496882 ASTLQ6HA08 431 aaPredicted RBP9.4□□□□□ -0.9
SRRM1-220ENST00000496882 PARP9Q8IXQ6 854 aa9.4□□□□□ -0.9
SRRM1-220ENST00000496882 TRMT44Q8IYL2 757 aaKnown RBP9.4□□□□□ -0.9
SRRM1-220ENST00000496882 KBTBD3Q8NAB2 608 aa9.4□□□□□ -0.9
SRRM1-220ENST00000496882 CCDC17Q96LX7 622 aa9.4□□□□□ -0.9
SRRM1-220ENST00000496882 NUDT12Q9BQG2 462 aa9.4□□□□□ -0.9
SRRM1-220ENST00000496882 HTATIP2Q9BUP3 242 aa9.4□□□□□ -0.9
SRRM1-220ENST00000496882 ARPP21Q9UBL0 812 aaPredicted RBP9.4□□□□□ -0.9
SRRM1-220ENST00000496882 RABGAP1Q9Y3P9 1069 aa9.4□□□□□ -0.9
SRRM1-220ENST00000496882 MGAMO43451 1857 aa9.4□□□□□ -0.91
SRRM1-220ENST00000496882 HTTP42858 3142 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 TTC41PQ6P2S7 1318 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 USP17L12C9JPN9 530 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 USP17L21D6R901 530 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 PRKAB2O43741 272 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 TFRCP02786 760 aaKnown RBP9.39□□□□□ -0.91
SRRM1-220ENST00000496882 GNAT2P19087 354 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 VCAM1P19320 739 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 GJA8P48165 433 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 ICA1Q05084 483 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 GABPAQ06546 454 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 U2AF1L4Q8WU68 220 aaKnown RBP9.39□□□□□ -0.91
SRRM1-220ENST00000496882 APPBP2Q92624 585 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 DYNLL2Q96FJ2 89 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 TANGO6Q9C0B7 1094 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 UNC93B1Q9H1C4 597 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 RPAP3Q9H6T3 665 aaPredicted RBP9.39□□□□□ -0.91
SRRM1-220ENST00000496882 ZNF287Q9HBT7 754 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 IVNS1ABPQ9Y6Y0 642 aa9.39□□□□□ -0.91
SRRM1-220ENST00000496882 RNF113AO15541 343 aaKnown RBP9.38□□□□□ -0.91
SRRM1-220ENST00000496882 APPP05067 770 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 CYP2D6P10635 497 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 ZKSCAN1P17029 563 aaPredicted RBP9.38□□□□□ -0.91
SRRM1-220ENST00000496882 CYP2B6P20813 491 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 RGS2P41220 211 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 TDO2P48775 406 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 CDK8P49336 464 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 ATP2B2Q01814 1243 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 C12orf60Q5U649 245 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 CATSPERGQ6ZRH7 1159 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 C16orf86Q6ZW13 317 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 PLEKHH3Q7Z736 793 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 SLC44A5Q8NCS7 719 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 ACER1Q8TDN7 264 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 LPAR1Q92633 364 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 DPF3Q92784 378 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 FSD1Q9BTV5 496 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 PUS7LQ9H0K6 701 aaKnown RBP9.38□□□□□ -0.91
SRRM1-220ENST00000496882 MKNK2Q9HBH9 465 aa9.38□□□□□ -0.91
SRRM1-220ENST00000496882 HMX1Q9NP08 348 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms