RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ACTN4O43707 911 aaKnown RBP14.92□□□□□ -0.02
GARNL3-220ENST00000496711 TRIM37O94972 964 aa14.92□□□□□ -0.02
GARNL3-220ENST00000496711 NLRP5P59047 1200 aa14.92□□□□□ -0.02
GARNL3-220ENST00000496711 FILIP1Q7Z7B0 1213 aa14.92□□□□□ -0.02
GARNL3-220ENST00000496711 SLF2Q8IX21 1173 aa14.92□□□□□ -0.02
GARNL3-220ENST00000496711 TBC1D22AQ8WUA7 517 aa14.92□□□□□ -0.02
GARNL3-220ENST00000496711 ZNF287Q9HBT7 754 aa14.92□□□□□ -0.02
GARNL3-220ENST00000496711 IFNKQ9P0W0 207 aa14.92□□□□□ -0.02
GARNL3-220ENST00000496711 KLRG2A4D1S0 409 aaPredicted RBP14.91□□□□□ -0.02
GARNL3-220ENST00000496711 MYO1BO43795 1136 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 HMGB2P26583 209 aaKnown RBP14.91□□□□□ -0.02
GARNL3-220ENST00000496711 LMOD1P29536 600 aaPredicted RBP14.91□□□□□ -0.02
GARNL3-220ENST00000496711 TRAPPC10P48553 1259 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 GNAQP50148 359 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 MFSD14BQ5SR56 506 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 NT5DC1Q5TFE4 455 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 FOXP4Q8IVH2 680 aaPredicted RBP14.91□□□□□ -0.02
GARNL3-220ENST00000496711 TEX11Q8IYF3 940 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 ZNF444Q8N0Y2 327 aaPredicted RBP14.91□□□□□ -0.02
GARNL3-220ENST00000496711 OSBPL5Q9H0X9 879 aaPredicted RBP14.91□□□□□ -0.02
GARNL3-220ENST00000496711 SH3GLB2Q9NR46 395 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 POLLQ9UGP5 575 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 SAP30BPQ9UHR5 308 aaKnown RBP14.91□□□□□ -0.02
GARNL3-220ENST00000496711 GAKO14976 1311 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 FLT1P17948 1338 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 USP17L3A6NCW0 530 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 USP17L4A6NCW7 530 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 PPEF1O14829 653 aaPredicted RBP14.91□□□□□ -0.02
GARNL3-220ENST00000496711 PRR29P0C7W0 189 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 RASA1P20936 1047 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 CALML3P27482 149 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 PLCD1P51178 756 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 ARID5BQ14865 1188 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 USP17L1Q7RTZ2 530 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 TRIML1Q8N9V2 468 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 SLC44A5Q8NCS7 719 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 MYRIPQ8NFW9 859 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 SMARCE1Q969G3 411 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 CCDC34Q96HJ3 373 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 HSD3B7Q9H2F3 369 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 DACH1Q9UI36 760 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 MAN1B1Q9UKM7 699 aa14.91□□□□□ -0.02
GARNL3-220ENST00000496711 WNT7AO00755 349 aa14.9□□□□□ -0.02
GARNL3-220ENST00000496711 ATP2C1P98194 919 aaPredicted RBP14.9□□□□□ -0.02
GARNL3-220ENST00000496711 FANCCQ00597 558 aa14.9□□□□□ -0.02
GARNL3-220ENST00000496711 TXNRD1Q16881 649 aa14.9□□□□□ -0.02
GARNL3-220ENST00000496711 NOM1Q5C9Z4 860 aaKnown RBP14.9□□□□□ -0.02
GARNL3-220ENST00000496711 C16orf86Q6ZW13 317 aa14.9□□□□□ -0.02
GARNL3-220ENST00000496711 USP49Q70CQ1 688 aa14.9□□□□□ -0.02
GARNL3-220ENST00000496711 PDILTQ8N807 584 aa14.9□□□□□ -0.02
GARNL3-220ENST00000496711 FAM163AQ96GL9 167 aaPredicted RBP14.9□□□□□ -0.02
GARNL3-220ENST00000496711 ADAMTSL1Q8N6G6 1762 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 FAM205AQ6ZU69 1335 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 C6orf229H3BNL8 230 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 DYNC1I1O14576 645 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 BMP6P22004 513 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 SARSP49591 514 aaKnown RBP14.89□□□□□ -0.03
GARNL3-220ENST00000496711 CCZ1BP86790 482 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 CCZ1P86791 482 aaPredicted RBP14.89□□□□□ -0.03
GARNL3-220ENST00000496711 DHX8Q14562 1220 aaKnown RBP14.89□□□□□ -0.03
GARNL3-220ENST00000496711 ZNF174Q15697 407 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 PIK3AP1Q6ZUJ8 805 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 CCDC150Q8NCX0 1101 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 SYMPKQ92797 1274 aaKnown RBP14.89□□□□□ -0.03
GARNL3-220ENST00000496711 MAD2L2Q9UI95 211 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 CBFA2T2O43439 604 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 RHBDL3P58872 404 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 MORC3Q14149 939 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 TMC6Q7Z403 805 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 SP8Q8IXZ3 490 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 STAG2Q8N3U4 1231 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 MLKLQ8NB16 471 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 DHX58Q96C10 678 aa14.89□□□□□ -0.03
GARNL3-220ENST00000496711 SKILP12757 684 aa14.88□□□□□ -0.03
GARNL3-220ENST00000496711 ATP1A3P13637 1013 aa14.88□□□□□ -0.03
GARNL3-220ENST00000496711 CDK8P49336 464 aa14.88□□□□□ -0.03
GARNL3-220ENST00000496711 PTGDRQ13258 359 aa14.88□□□□□ -0.03
GARNL3-220ENST00000496711 GRAMD1CQ8IYS0 662 aa14.88□□□□□ -0.03
GARNL3-220ENST00000496711 BLIDQ8IZY5 108 aa14.88□□□□□ -0.03
GARNL3-220ENST00000496711 CCDC148Q8NFR7 591 aa14.88□□□□□ -0.03
GARNL3-220ENST00000496711 GPKOWQ92917 476 aaPredicted RBP eCLIP14.88□□□□□ -0.03
GARNL3-220ENST00000496711 EPSTI1Q96J88 318 aa14.88□□□□□ -0.03
GARNL3-220ENST00000496711 TMEM47Q9BQJ4 181 aa14.88□□□□□ -0.03
GARNL3-220ENST00000496711 PCDHA4Q9UN74 947 aa14.88□□□□□ -0.03
GARNL3-220ENST00000496711 STX8Q9UNK0 236 aa14.88□□□□□ -0.03
GARNL3-220ENST00000496711 A0A087X0B3 334 aa14.87□□□□□ -0.03
GARNL3-220ENST00000496711 VEGFAP15692 232 aaPredicted RBP14.87□□□□□ -0.03
GARNL3-220ENST00000496711 SPATA20Q8TB22 786 aa14.87□□□□□ -0.03
GARNL3-220ENST00000496711 EYA3Q99504 573 aa14.87□□□□□ -0.03
GARNL3-220ENST00000496711 LZTS2Q9BRK4 669 aa14.87□□□□□ -0.03
GARNL3-220ENST00000496711 ATP6V0A2Q9Y487 856 aa14.87□□□□□ -0.03
GARNL3-220ENST00000496711 EP400Q96L91 3159 aa14.87□□□□□ -0.03
GARNL3-220ENST00000496711 VWA3AA6NCI4 1184 aa14.86□□□□□ -0.03
GARNL3-220ENST00000496711 SERPINC1P01008 464 aa14.86□□□□□ -0.03
GARNL3-220ENST00000496711 SLFN14P0C7P3 912 aa14.86□□□□□ -0.03
GARNL3-220ENST00000496711 PROM2Q8N271 834 aa14.86□□□□□ -0.03
GARNL3-220ENST00000496711 NEDD1Q8NHV4 660 aa14.86□□□□□ -0.03
GARNL3-220ENST00000496711 C16orf45Q96MC5 204 aaPredicted RBP14.86□□□□□ -0.03
GARNL3-220ENST00000496711 COA1Q9GZY4 146 aa14.86□□□□□ -0.03
GARNL3-220ENST00000496711 PALM3A6NDB9 673 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms