RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 HIP1O00291 1037 aa19.19■□□□□ 0.66
DNMT3A-215ENST00000496570 FMNL1O95466 1100 aaPredicted RBP19.19■□□□□ 0.66
DNMT3A-215ENST00000496570 FCGRTP55899 365 aa19.19■□□□□ 0.66
DNMT3A-215ENST00000496570 PDE4BQ07343 736 aa19.19■□□□□ 0.66
DNMT3A-215ENST00000496570 Q3C1V9 767 aa19.19■□□□□ 0.66
DNMT3A-215ENST00000496570 LBX2Q6XYB7 198 aa19.19■□□□□ 0.66
DNMT3A-215ENST00000496570 NYAP2Q9P242 653 aa19.19■□□□□ 0.66
DNMT3A-215ENST00000496570 GABRQQ9UN88 632 aa19.19■□□□□ 0.66
DNMT3A-215ENST00000496570 A0A0G2JMZ2 1700 aa19.19■□□□□ 0.66
DNMT3A-215ENST00000496570 SPDYE16A6NNV3 312 aaPredicted RBP19.18■□□□□ 0.66
DNMT3A-215ENST00000496570 PRKCZQ05513 592 aa19.18■□□□□ 0.66
DNMT3A-215ENST00000496570 FAM47AQ5JRC9 791 aa19.18■□□□□ 0.66
DNMT3A-215ENST00000496570 ZNF444Q8N0Y2 327 aaPredicted RBP19.18■□□□□ 0.66
DNMT3A-215ENST00000496570 SPICE1Q8N0Z3 855 aa19.18■□□□□ 0.66
DNMT3A-215ENST00000496570 NEDD1Q8NHV4 660 aa19.18■□□□□ 0.66
DNMT3A-215ENST00000496570 NKX2-3Q8TAU0 364 aa19.18■□□□□ 0.66
DNMT3A-215ENST00000496570 LPAR1Q92633 364 aa19.18■□□□□ 0.66
DNMT3A-215ENST00000496570 ARMC5Q96C12 935 aa19.18■□□□□ 0.66
DNMT3A-215ENST00000496570 CEP95Q96GE4 821 aa19.18■□□□□ 0.66
DNMT3A-215ENST00000496570 ZNF287Q9HBT7 754 aa19.18■□□□□ 0.66
DNMT3A-215ENST00000496570 MTMR4Q9NYA4 1195 aa19.18■□□□□ 0.66
DNMT3A-215ENST00000496570 PLXNB2O15031 1838 aa19.18■□□□□ 0.66
DNMT3A-215ENST00000496570 DOCK3Q8IZD9 2030 aa19.17■□□□□ 0.66
DNMT3A-215ENST00000496570 LAMA4Q16363 1823 aa19.17■□□□□ 0.66
DNMT3A-215ENST00000496570 CHMLP26374 656 aa19.17■□□□□ 0.66
DNMT3A-215ENST00000496570 PRMT2P55345 433 aa19.17■□□□□ 0.66
DNMT3A-215ENST00000496570 SH2D4AQ9H788 454 aa19.17■□□□□ 0.66
DNMT3A-215ENST00000496570 MYPNQ86TC9 1320 aa19.17■□□□□ 0.66
DNMT3A-215ENST00000496570 BRCA2P51587 3418 aa19.17■□□□□ 0.66
DNMT3A-215ENST00000496570 MYH4Q9Y623 1939 aa19.16■□□□□ 0.66
DNMT3A-215ENST00000496570 ORC4O43929 436 aa19.16■□□□□ 0.66
DNMT3A-215ENST00000496570 SLC3A2P08195 630 aaKnown RBP19.16■□□□□ 0.66
DNMT3A-215ENST00000496570 MFAP1P55081 439 aaKnown RBP19.16■□□□□ 0.66
DNMT3A-215ENST00000496570 ERVK-9P63128 1117 aa19.16■□□□□ 0.66
DNMT3A-215ENST00000496570 ERVK-24P63145 666 aa19.16■□□□□ 0.66
DNMT3A-215ENST00000496570 TFAP4Q01664 338 aa19.16■□□□□ 0.66
DNMT3A-215ENST00000496570 ATP2B2Q01814 1243 aa19.16■□□□□ 0.66
DNMT3A-215ENST00000496570 TBC1D10CQ8IV04 446 aa19.16■□□□□ 0.66
DNMT3A-215ENST00000496570 GPRC5AQ8NFJ5 357 aa19.16■□□□□ 0.66
DNMT3A-215ENST00000496570 MKL1Q969V6 931 aa19.16■□□□□ 0.66
DNMT3A-215ENST00000496570 IL17RBQ9NRM6 502 aa19.16■□□□□ 0.66
DNMT3A-215ENST00000496570 BTBD7Q9P203 1132 aa19.16■□□□□ 0.66
DNMT3A-215ENST00000496570 RABGAP1Q9Y3P9 1069 aa19.16■□□□□ 0.66
DNMT3A-215ENST00000496570 TNPO2O14787 897 aaKnown RBP19.15■□□□□ 0.66
DNMT3A-215ENST00000496570 WDR46O15213 610 aaKnown RBP19.15■□□□□ 0.66
DNMT3A-215ENST00000496570 TSPY3P0CV98 308 aa19.15■□□□□ 0.66
DNMT3A-215ENST00000496570 TSPY8P0CW00 308 aa19.15■□□□□ 0.66
DNMT3A-215ENST00000496570 HOXD10P28358 340 aa19.15■□□□□ 0.66
DNMT3A-215ENST00000496570 HAND2P61296 217 aa19.15■□□□□ 0.66
DNMT3A-215ENST00000496570 GTF3C2Q8WUA4 911 aaPredicted RBP19.15■□□□□ 0.66
DNMT3A-215ENST00000496570 ZNF333Q96JL9 665 aa19.15■□□□□ 0.66
DNMT3A-215ENST00000496570 PAGR1Q9BTK6 254 aa19.15■□□□□ 0.66
DNMT3A-215ENST00000496570 DSCC1Q9BVC3 393 aa19.15■□□□□ 0.66
DNMT3A-215ENST00000496570 PORCNQ9H237 461 aa19.15■□□□□ 0.66
DNMT3A-215ENST00000496570 CLIP2Q9UDT6 1046 aa19.15■□□□□ 0.66
DNMT3A-215ENST00000496570 GJD2Q9UKL4 321 aa19.15■□□□□ 0.66
DNMT3A-215ENST00000496570 NMT2O60551 498 aa19.14■□□□□ 0.65
DNMT3A-215ENST00000496570 NOVP48745 357 aa19.14■□□□□ 0.65
DNMT3A-215ENST00000496570 FLT3LGP49771 235 aa19.14■□□□□ 0.65
DNMT3A-215ENST00000496570 SOX10P56693 466 aa19.14■□□□□ 0.65
DNMT3A-215ENST00000496570 COG2Q14746 738 aa19.14■□□□□ 0.65
DNMT3A-215ENST00000496570 SH3TC2Q8TF17 1288 aa19.14■□□□□ 0.65
DNMT3A-215ENST00000496570 TANGO6Q9C0B7 1094 aa19.14■□□□□ 0.65
DNMT3A-215ENST00000496570 F5H6K3 240 aa19.13■□□□□ 0.65
DNMT3A-215ENST00000496570 DSG3P32926 999 aa19.13■□□□□ 0.65
DNMT3A-215ENST00000496570 RGS19P49795 217 aa19.13■□□□□ 0.65
DNMT3A-215ENST00000496570 KLRC3Q07444 240 aa19.13■□□□□ 0.65
DNMT3A-215ENST00000496570 NUP88Q99567 741 aaPredicted RBP19.13■□□□□ 0.65
DNMT3A-215ENST00000496570 GOPCQ9HD26 462 aa19.13■□□□□ 0.65
DNMT3A-215ENST00000496570 ADAMTS5Q9UNA0 930 aa19.13■□□□□ 0.65
DNMT3A-215ENST00000496570 RAD50Q92878 1312 aa19.13■□□□□ 0.65
DNMT3A-215ENST00000496570 RBBP6Q7Z6E9 1792 aaKnown RBP19.12■□□□□ 0.65
DNMT3A-215ENST00000496570 NEDD4P46934 1319 aa19.12■□□□□ 0.65
DNMT3A-215ENST00000496570 TTLL1O95922 423 aa19.12■□□□□ 0.65
DNMT3A-215ENST00000496570 NDUFB10O96000 172 aa19.12■□□□□ 0.65
DNMT3A-215ENST00000496570 IRF5Q13568 498 aa19.12■□□□□ 0.65
DNMT3A-215ENST00000496570 SLC9C1Q4G0N8 1177 aa19.12■□□□□ 0.65
DNMT3A-215ENST00000496570 FAM83BQ5T0W9 1011 aa19.12■□□□□ 0.65
DNMT3A-215ENST00000496570 AKNAD1Q5T1N1 836 aa19.12■□□□□ 0.65
DNMT3A-215ENST00000496570 LRRC47Q8N1G4 583 aaKnown RBP19.12■□□□□ 0.65
DNMT3A-215ENST00000496570 STAG1Q8WVM7 1258 aa19.12■□□□□ 0.65
DNMT3A-215ENST00000496570 ATG4CQ96DT6 458 aa19.12■□□□□ 0.65
DNMT3A-215ENST00000496570 FBXO28Q9NVF7 368 aa19.12■□□□□ 0.65
DNMT3A-215ENST00000496570 HOXC10Q9NYD6 342 aa19.12■□□□□ 0.65
DNMT3A-215ENST00000496570 SYNPO2Q9UMS6 1093 aa19.12■□□□□ 0.65
DNMT3A-215ENST00000496570 TSPY2A6NKD2 308 aa19.11■□□□□ 0.65
DNMT3A-215ENST00000496570 RANBP6O60518 1105 aaKnown RBP19.11■□□□□ 0.65
DNMT3A-215ENST00000496570 FLOT1O75955 427 aa19.11■□□□□ 0.65
DNMT3A-215ENST00000496570 GMCL1P1Q8NEA9 526 aa19.11■□□□□ 0.65
DNMT3A-215ENST00000496570 RAET1EQ8TD07 263 aa19.11■□□□□ 0.65
DNMT3A-215ENST00000496570 COA7Q96BR5 231 aa19.11■□□□□ 0.65
DNMT3A-215ENST00000496570 COL11A1P12107 1806 aaPredicted RBP19.1■□□□□ 0.65
DNMT3A-215ENST00000496570 SGSM2O43147 1006 aa19.1■□□□□ 0.65
DNMT3A-215ENST00000496570 GRK4P32298 578 aa19.1■□□□□ 0.65
DNMT3A-215ENST00000496570 PTH1RQ03431 593 aa19.1■□□□□ 0.65
DNMT3A-215ENST00000496570 GPR142Q7Z601 462 aa19.1■□□□□ 0.65
DNMT3A-215ENST00000496570 USP6NLQ92738 828 aa19.1■□□□□ 0.65
DNMT3A-215ENST00000496570 CCDC136Q96JN2 1154 aa19.1■□□□□ 0.65
DNMT3A-215ENST00000496570 POTEFA5A3E0 1075 aa19.09■□□□□ 0.65
DNMT3A-215ENST00000496570 MAPK4P31152 587 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms