RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 TMTC3Q6ZXV5 915 aa17.05■□□□□ 0.32
UBXN11-216ENST00000496466 SPATA20Q8TB22 786 aa17.05■□□□□ 0.32
UBXN11-216ENST00000496466 ENOX1Q8TC92 643 aaKnown RBP17.05■□□□□ 0.32
UBXN11-216ENST00000496466 ZNF18P17022 549 aa17.04■□□□□ 0.32
UBXN11-216ENST00000496466 A0A087X0B3 334 aa17.04■□□□□ 0.32
UBXN11-216ENST00000496466 ORC4O43929 436 aa17.04■□□□□ 0.32
UBXN11-216ENST00000496466 LDHBP07195 334 aaKnown RBP17.04■□□□□ 0.32
UBXN11-216ENST00000496466 GOLGA8FQ08AF8 430 aa17.04■□□□□ 0.32
UBXN11-216ENST00000496466 GOLGA8DPQ0D2H9 430 aa17.04■□□□□ 0.32
UBXN11-216ENST00000496466 HSP90AA4PQ58FG1 418 aa17.04■□□□□ 0.32
UBXN11-216ENST00000496466 WDR66Q8TBY9 1149 aa17.04■□□□□ 0.32
UBXN11-216ENST00000496466 MCM9Q9NXL9 1143 aa17.04■□□□□ 0.32
UBXN11-216ENST00000496466 NFE2L3Q9Y4A8 694 aa17.04■□□□□ 0.32
UBXN11-216ENST00000496466 UBR3Q6ZT12 1888 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 EP400Q96L91 3159 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 WNT7AO00755 349 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 TRIM37O94972 964 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 USP17L8P0C7I0 530 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 DIXDC1Q155Q3 683 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 NPY5RQ15761 445 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 CRY2Q49AN0 593 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 SYT10Q6XYQ8 523 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 TNFRSF25Q93038 417 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 EPSTI1Q96J88 318 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 MED15Q96RN5 788 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 CGNQ9P2M7 1197 aaKnown RBP17.03■□□□□ 0.32
UBXN11-216ENST00000496466 CNTNAP5Q8WYK1 1306 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 TUBB4AP04350 444 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 CBX1P83916 185 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 TBX2Q13207 712 aaPredicted RBP17.03■□□□□ 0.32
UBXN11-216ENST00000496466 NOM1Q5C9Z4 860 aaKnown RBP17.03■□□□□ 0.32
UBXN11-216ENST00000496466 TRMT44Q8IYL2 757 aaKnown RBP17.03■□□□□ 0.32
UBXN11-216ENST00000496466 SH3RF3Q8TEJ3 882 aaPredicted RBP17.03■□□□□ 0.32
UBXN11-216ENST00000496466 DHX58Q96C10 678 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 ERO1AQ96HE7 468 aa17.03■□□□□ 0.32
UBXN11-216ENST00000496466 ARPP21Q9UBL0 812 aaPredicted RBP17.03■□□□□ 0.32
UBXN11-216ENST00000496466 MAST2Q6P0Q8 1798 aa17.02■□□□□ 0.32
UBXN11-216ENST00000496466 ZBTB22O15209 634 aa17.02■□□□□ 0.32
UBXN11-216ENST00000496466 CCP110O43303 1012 aa17.02■□□□□ 0.32
UBXN11-216ENST00000496466 SLU7O95391 586 aaKnown RBP17.02■□□□□ 0.32
UBXN11-216ENST00000496466 ST5P78524 1137 aa17.02■□□□□ 0.32
UBXN11-216ENST00000496466 SBK1Q52WX2 424 aa17.02■□□□□ 0.32
UBXN11-216ENST00000496466 UTP14CQ5TAP6 766 aaKnown RBP17.02■□□□□ 0.32
UBXN11-216ENST00000496466 ZNF804AQ7Z570 1209 aa17.02■□□□□ 0.32
UBXN11-216ENST00000496466 SRBD1Q8N5C6 995 aaKnown RBP17.02■□□□□ 0.32
UBXN11-216ENST00000496466 BRMS1Q9HCU9 246 aa17.02■□□□□ 0.32
UBXN11-216ENST00000496466 CCDC88AQ3V6T2 1871 aa17.02■□□□□ 0.32
UBXN11-216ENST00000496466 UFL1O94874 794 aa17.02■□□□□ 0.31
UBXN11-216ENST00000496466 BMP15O95972 392 aa17.02■□□□□ 0.31
UBXN11-216ENST00000496466 CDK11BP21127 795 aaKnown RBP17.02■□□□□ 0.31
UBXN11-216ENST00000496466 PLCD1P51178 756 aa17.02■□□□□ 0.31
UBXN11-216ENST00000496466 SH3RF1Q7Z6J0 888 aa17.02■□□□□ 0.31
UBXN11-216ENST00000496466 FERMT2Q96AC1 680 aa17.02■□□□□ 0.31
UBXN11-216ENST00000496466 L2HGDHQ9H9P8 463 aa17.02■□□□□ 0.31
UBXN11-216ENST00000496466 SLFN14P0C7P3 912 aa17.01■□□□□ 0.31
UBXN11-216ENST00000496466 DDR1Q08345 913 aa17.01■□□□□ 0.31
UBXN11-216ENST00000496466 ZNF174Q15697 407 aa17.01■□□□□ 0.31
UBXN11-216ENST00000496466 SLC27A3Q5K4L6 730 aa17.01■□□□□ 0.31
UBXN11-216ENST00000496466 TMEM139Q8IV31 216 aa17.01■□□□□ 0.31
UBXN11-216ENST00000496466 CTCFLQ8NI51 663 aaPredicted RBP17.01■□□□□ 0.31
UBXN11-216ENST00000496466 SYMPKQ92797 1274 aaKnown RBP17.01■□□□□ 0.31
UBXN11-216ENST00000496466 MKRN1Q9UHC7 482 aaKnown RBP17.01■□□□□ 0.31
UBXN11-216ENST00000496466 LAMB1P07942 1786 aa17.01■□□□□ 0.31
UBXN11-216ENST00000496466 SPDYE4A6NLX3 237 aa17.01■□□□□ 0.31
UBXN11-216ENST00000496466 ERCC5P28715 1186 aaPredicted RBP17.01■□□□□ 0.31
UBXN11-216ENST00000496466 USP5P45974 858 aa17.01■□□□□ 0.31
UBXN11-216ENST00000496466 TTC38Q5R3I4 469 aa17.01■□□□□ 0.31
UBXN11-216ENST00000496466 TMED8Q6PL24 325 aaPredicted RBP17.01■□□□□ 0.31
UBXN11-216ENST00000496466 KRT27Q7Z3Y8 459 aa17.01■□□□□ 0.31
UBXN11-216ENST00000496466 PAGE5Q96GU1 130 aa17.01■□□□□ 0.31
UBXN11-216ENST00000496466 RBM17Q96I25 401 aaKnown RBP17.01■□□□□ 0.31
UBXN11-216ENST00000496466 SAMSN1Q9NSI8 373 aaKnown RBP17.01■□□□□ 0.31
UBXN11-216ENST00000496466 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.01■□□□□ 0.31
UBXN11-216ENST00000496466 V9GYY5 206 aaPredicted RBP17.01■□□□□ 0.31
UBXN11-216ENST00000496466 AFMP43652 599 aa17■□□□□ 0.31
UBXN11-216ENST00000496466 C15orf52Q6ZUT6 534 aaKnown RBP17■□□□□ 0.31
UBXN11-216ENST00000496466 FCHSD1Q86WN1 690 aa17■□□□□ 0.31
UBXN11-216ENST00000496466 REXO1L1PQ8IX06 675 aa17■□□□□ 0.31
UBXN11-216ENST00000496466 KIAA1551Q9HCM1 1747 aa17■□□□□ 0.31
UBXN11-216ENST00000496466 ETF1P62495 437 aaKnown RBP16.99■□□□□ 0.31
UBXN11-216ENST00000496466 CCDC93Q567U6 631 aa16.99■□□□□ 0.31
UBXN11-216ENST00000496466 HOMER1Q86YM7 354 aa16.99■□□□□ 0.31
UBXN11-216ENST00000496466 DYNLL2Q96FJ2 89 aa16.99■□□□□ 0.31
UBXN11-216ENST00000496466 CCDC34Q96HJ3 373 aa16.99■□□□□ 0.31
UBXN11-216ENST00000496466 FEZ1Q99689 392 aa16.99■□□□□ 0.31
UBXN11-216ENST00000496466 CD209Q9NNX6 404 aa16.99■□□□□ 0.31
UBXN11-216ENST00000496466 TSPY2A6NKD2 308 aa16.99■□□□□ 0.31
UBXN11-216ENST00000496466 ATP2C1P98194 919 aaPredicted RBP16.99■□□□□ 0.31
UBXN11-216ENST00000496466 C12orf60Q5U649 245 aa16.99■□□□□ 0.31
UBXN11-216ENST00000496466 SPECC1LQ69YQ0 1117 aa16.99■□□□□ 0.31
UBXN11-216ENST00000496466 PROM2Q8N271 834 aa16.99■□□□□ 0.31
UBXN11-216ENST00000496466 ARHGAP6O43182 974 aa16.98■□□□□ 0.31
UBXN11-216ENST00000496466 SCG2P13521 617 aa16.98■□□□□ 0.31
UBXN11-216ENST00000496466 CASP1P29466 404 aa16.98■□□□□ 0.31
UBXN11-216ENST00000496466 PTGDRQ13258 359 aa16.98■□□□□ 0.31
UBXN11-216ENST00000496466 CT47A1Q5JQC4 288 aaPredicted RBP16.98■□□□□ 0.31
UBXN11-216ENST00000496466 TRIM65Q6PJ69 517 aa16.98■□□□□ 0.31
UBXN11-216ENST00000496466 GGA1Q9UJY5 639 aa16.98■□□□□ 0.31
UBXN11-216ENST00000496466 POLRMTO00411 1230 aaKnown RBP16.98■□□□□ 0.31
UBXN11-216ENST00000496466 ATP2B4P23634 1241 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms