RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 WTAPQ15007 396 aa15.85■□□□□ 0.13
PTPN7-218ENST00000496197 TMEM87BQ96K49 555 aa15.85■□□□□ 0.13
PTPN7-218ENST00000496197 MYL10Q9BUA6 226 aa15.85■□□□□ 0.13
PTPN7-218ENST00000496197 AS3MTQ9HBK9 375 aa15.85■□□□□ 0.13
PTPN7-218ENST00000496197 ARHGEF10LQ9HCE6 1279 aa15.85■□□□□ 0.13
PTPN7-218ENST00000496197 PDRG1Q9NUG6 133 aa15.85■□□□□ 0.13
PTPN7-218ENST00000496197 BRPF3Q9ULD4 1205 aa15.85■□□□□ 0.13
PTPN7-218ENST00000496197 A0A0G2JLL6 359 aaPredicted RBP15.84■□□□□ 0.13
PTPN7-218ENST00000496197 USP17L10C9JJH3 530 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 HSPA6P17066 643 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 DEFB115Q30KQ5 88 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 IFIT1BQ5T764 474 aaKnown RBP15.84■□□□□ 0.13
PTPN7-218ENST00000496197 PAXIP1Q6ZW49 1069 aaPredicted RBP15.84■□□□□ 0.13
PTPN7-218ENST00000496197 PRRT2Q7Z6L0 340 aaPredicted RBP15.84■□□□□ 0.13
PTPN7-218ENST00000496197 RAB11FIP4Q86YS3 637 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 SPICE1Q8N0Z3 855 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 BRF1Q92994 677 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 MTA3Q9BTC8 594 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 KIAA1683Q9H0B3 1180 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 MTMR7Q9Y216 660 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 COL11A1P12107 1806 aaPredicted RBP15.84■□□□□ 0.13
PTPN7-218ENST00000496197 AOC2O75106 756 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 ZBTB48P10074 688 aaPredicted RBP15.84■□□□□ 0.13
PTPN7-218ENST00000496197 TOP1P11387 765 aaKnown RBP15.84■□□□□ 0.13
PTPN7-218ENST00000496197 LIFRP42702 1097 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 AK2P54819 239 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 APOBRQ0VD83 1088 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 SH3D19Q5HYK7 790 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 PNMA1Q8ND90 353 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 NUP88Q99567 741 aaPredicted RBP15.84■□□□□ 0.13
PTPN7-218ENST00000496197 FEZ1Q99689 392 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 VCPKMTQ9H867 229 aa15.84■□□□□ 0.13
PTPN7-218ENST00000496197 ERICH2A1L162 156 aa15.83■□□□□ 0.12
PTPN7-218ENST00000496197 F5H6K3 240 aa15.83■□□□□ 0.12
PTPN7-218ENST00000496197 NDUFB10O96000 172 aa15.83■□□□□ 0.12
PTPN7-218ENST00000496197 RXRAP19793 462 aa15.83■□□□□ 0.12
PTPN7-218ENST00000496197 KLRC3Q07444 240 aa15.83■□□□□ 0.12
PTPN7-218ENST00000496197 SART3Q15020 963 aaKnown RBP15.83■□□□□ 0.12
PTPN7-218ENST00000496197 TREML2Q5T2D2 321 aa15.83■□□□□ 0.12
PTPN7-218ENST00000496197 NOL8Q76FK4 1167 aaKnown RBP15.83■□□□□ 0.12
PTPN7-218ENST00000496197 SGMS1Q86VZ5 419 aa15.83■□□□□ 0.12
PTPN7-218ENST00000496197 FBXL16Q8N461 479 aa15.83■□□□□ 0.12
PTPN7-218ENST00000496197 BRI3BPQ8WY22 251 aa15.83■□□□□ 0.12
PTPN7-218ENST00000496197 CAPNS2Q96L46 248 aa15.83■□□□□ 0.12
PTPN7-218ENST00000496197 TBC1D2Q9BYX2 928 aa15.83■□□□□ 0.12
PTPN7-218ENST00000496197 KAT14Q9H8E8 782 aa15.83■□□□□ 0.12
PTPN7-218ENST00000496197 CXCL11O14625 94 aa15.82■□□□□ 0.12
PTPN7-218ENST00000496197 RAD21O60216 631 aa15.82■□□□□ 0.12
PTPN7-218ENST00000496197 LARGE1O95461 756 aa15.82■□□□□ 0.12
PTPN7-218ENST00000496197 VCAM1P19320 739 aa15.82■□□□□ 0.12
PTPN7-218ENST00000496197 VEGFBP49765 207 aa15.82■□□□□ 0.12
PTPN7-218ENST00000496197 RABEP1Q15276 862 aa15.82■□□□□ 0.12
PTPN7-218ENST00000496197 CCDC178Q5BJE1 867 aa15.82■□□□□ 0.12
PTPN7-218ENST00000496197 ZNF654Q8IZM8 581 aa15.82■□□□□ 0.12
PTPN7-218ENST00000496197 GMCL1P1Q8NEA9 526 aa15.82■□□□□ 0.12
PTPN7-218ENST00000496197 C12orf42Q96LP6 360 aa15.82■□□□□ 0.12
PTPN7-218ENST00000496197 PTPN18Q99952 460 aa15.82■□□□□ 0.12
PTPN7-218ENST00000496197 A0A0G2JMZ2 1700 aa15.81■□□□□ 0.12
PTPN7-218ENST00000496197 KLF18A0A0U1RQI7 1052 aa15.81■□□□□ 0.12
PTPN7-218ENST00000496197 PDHBP11177 359 aa15.81■□□□□ 0.12
PTPN7-218ENST00000496197 TROAPQ12815 778 aa15.81■□□□□ 0.12
PTPN7-218ENST00000496197 SNAPC2Q13487 334 aa15.81■□□□□ 0.12
PTPN7-218ENST00000496197 SLFN13Q68D06 897 aa15.81■□□□□ 0.12
PTPN7-218ENST00000496197 GPAT2Q6NUI2 795 aa15.81■□□□□ 0.12
PTPN7-218ENST00000496197 APOA5Q6Q788 366 aa15.81■□□□□ 0.12
PTPN7-218ENST00000496197 USP17L2Q6R6M4 530 aa15.81■□□□□ 0.12
PTPN7-218ENST00000496197 GADL1Q6ZQY3 521 aa15.81■□□□□ 0.12
PTPN7-218ENST00000496197 CCDC102AQ96A19 550 aa15.81■□□□□ 0.12
PTPN7-218ENST00000496197 ALDH8A1Q9H2A2 487 aaPredicted RBP15.81■□□□□ 0.12
PTPN7-218ENST00000496197 TPCN1Q9ULQ1 816 aa15.81■□□□□ 0.12
PTPN7-218ENST00000496197 FRMPD2Q68DX3 1309 aaPredicted RBP15.8■□□□□ 0.12
PTPN7-218ENST00000496197 WDR33Q9C0J8 1336 aaKnown RBP15.8■□□□□ 0.12
PTPN7-218ENST00000496197 CCL15-CCL14A0A0B4J2E2 113 aa15.8■□□□□ 0.12
PTPN7-218ENST00000496197 C19orf81C9J6K1 198 aa15.8■□□□□ 0.12
PTPN7-218ENST00000496197 SNHG28P0DPA3 235 aa15.8■□□□□ 0.12
PTPN7-218ENST00000496197 GTF2A2P52657 109 aa15.8■□□□□ 0.12
PTPN7-218ENST00000496197 FGD1P98174 961 aa15.8■□□□□ 0.12
PTPN7-218ENST00000496197 CCL15Q16663 113 aa15.8■□□□□ 0.12
PTPN7-218ENST00000496197 FAM83BQ5T0W9 1011 aa15.8■□□□□ 0.12
PTPN7-218ENST00000496197 NFXL1Q6ZNB6 911 aa15.8■□□□□ 0.12
PTPN7-218ENST00000496197 CCDC144CPQ8IYA2 1237 aa15.8■□□□□ 0.12
PTPN7-218ENST00000496197 SH2D4AQ9H788 454 aa15.8■□□□□ 0.12
PTPN7-218ENST00000496197 GOPCQ9HD26 462 aa15.8■□□□□ 0.12
PTPN7-218ENST00000496197 SYNPO2Q9UMS6 1093 aa15.8■□□□□ 0.12
PTPN7-218ENST00000496197 HPS5Q9UPZ3 1129 aa15.8■□□□□ 0.12
PTPN7-218ENST00000496197 TESPA1A2RU30 521 aaPredicted RBP15.79■□□□□ 0.12
PTPN7-218ENST00000496197 CCDC69A6NI79 296 aa15.79■□□□□ 0.12
PTPN7-218ENST00000496197 IGF2BP3O00425 579 aaKnown RBP eCLIP15.79■□□□□ 0.12
PTPN7-218ENST00000496197 GOLGA8HP0CJ92 632 aa15.79■□□□□ 0.12
PTPN7-218ENST00000496197 USP14P54578 494 aa15.79■□□□□ 0.12
PTPN7-218ENST00000496197 EVCP57679 992 aa15.79■□□□□ 0.12
PTPN7-218ENST00000496197 KIF23Q02241 960 aaPredicted RBP15.79■□□□□ 0.12
PTPN7-218ENST00000496197 PPP4R3BQ5MIZ7 849 aa15.79■□□□□ 0.12
PTPN7-218ENST00000496197 KCTD1Q719H9 257 aa15.79■□□□□ 0.12
PTPN7-218ENST00000496197 MICU3Q86XE3 530 aa15.79■□□□□ 0.12
PTPN7-218ENST00000496197 FAM43AQ8N2R8 423 aa15.79■□□□□ 0.12
PTPN7-218ENST00000496197 STAG2Q8N3U4 1231 aa15.79■□□□□ 0.12
PTPN7-218ENST00000496197 CPVLQ9H3G5 476 aa15.79■□□□□ 0.12
PTPN7-218ENST00000496197 RPAP3Q9H6T3 665 aaPredicted RBP15.79■□□□□ 0.12
PTPN7-218ENST00000496197 MYH6P13533 1939 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms