RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 TANGO6Q9C0B7 1094 aa20.36■□□□□ 0.85
APOBEC3A-204ENST00000495988 SH2D4AQ9H788 454 aa20.36■□□□□ 0.85
APOBEC3A-204ENST00000495988 PCDHB15Q9Y5E8 787 aa20.36■□□□□ 0.85
APOBEC3A-204ENST00000495988 NR2E3Q9Y5X4 410 aa20.36■□□□□ 0.85
APOBEC3A-204ENST00000495988 MAP2K5Q13163 448 aa20.35■□□□□ 0.85
APOBEC3A-204ENST00000495988 ANKLE1Q8NAG6 615 aa20.35■□□□□ 0.85
APOBEC3A-204ENST00000495988 HOXC10Q9NYD6 342 aa20.35■□□□□ 0.85
APOBEC3A-204ENST00000495988 ARPP21Q9UBL0 812 aaPredicted RBP20.35■□□□□ 0.85
APOBEC3A-204ENST00000495988 TMX2Q9Y320 296 aa20.35■□□□□ 0.85
APOBEC3A-204ENST00000495988 IVNS1ABPQ9Y6Y0 642 aa20.35■□□□□ 0.85
APOBEC3A-204ENST00000495988 RRP1P56182 461 aaKnown RBP20.34■□□□□ 0.85
APOBEC3A-204ENST00000495988 CACNB2Q08289 660 aaPredicted RBP20.34■□□□□ 0.85
APOBEC3A-204ENST00000495988 KIAA1755Q5JYT7 1200 aa20.34■□□□□ 0.85
APOBEC3A-204ENST00000495988 NECAB2Q7Z6G3 386 aa20.34■□□□□ 0.85
APOBEC3A-204ENST00000495988 SIAH1Q8IUQ4 282 aa20.34■□□□□ 0.85
APOBEC3A-204ENST00000495988 DIS3LQ8TF46 1054 aaKnown RBP20.34■□□□□ 0.85
APOBEC3A-204ENST00000495988 APPBP2Q92624 585 aa20.34■□□□□ 0.85
APOBEC3A-204ENST00000495988 LPAR1Q92633 364 aa20.34■□□□□ 0.85
APOBEC3A-204ENST00000495988 STRBPQ96SI9 672 aaKnown RBP20.34■□□□□ 0.85
APOBEC3A-204ENST00000495988 SLC15A5A6NIM6 579 aa20.33■□□□□ 0.85
APOBEC3A-204ENST00000495988 RNF113AO15541 343 aaKnown RBP20.33■□□□□ 0.85
APOBEC3A-204ENST00000495988 EVI5O60447 810 aa20.33■□□□□ 0.85
APOBEC3A-204ENST00000495988 PTPREP23469 700 aa20.33■□□□□ 0.85
APOBEC3A-204ENST00000495988 CHRDL2Q6WN34 429 aa20.33■□□□□ 0.85
APOBEC3A-204ENST00000495988 SPICE1Q8N0Z3 855 aa20.33■□□□□ 0.85
APOBEC3A-204ENST00000495988 OSBP2Q969R2 916 aa20.33■□□□□ 0.85
APOBEC3A-204ENST00000495988 VCPKMTQ9H867 229 aa20.33■□□□□ 0.85
APOBEC3A-204ENST00000495988 TTC41PQ6P2S7 1318 aa20.32■□□□□ 0.84
APOBEC3A-204ENST00000495988 CEP290O15078 2479 aa20.32■□□□□ 0.84
APOBEC3A-204ENST00000495988 RLFQ13129 1914 aa20.32■□□□□ 0.84
APOBEC3A-204ENST00000495988 ZFYP08048 801 aaPredicted RBP20.32■□□□□ 0.84
APOBEC3A-204ENST00000495988 ATP2B2Q01814 1243 aa20.32■□□□□ 0.84
APOBEC3A-204ENST00000495988 OGDHLQ9ULD0 1010 aa20.32■□□□□ 0.84
APOBEC3A-204ENST00000495988 A0A0G2JMZ2 1700 aa20.31■□□□□ 0.84
APOBEC3A-204ENST00000495988 GSG1L2A8MUP6 293 aa20.31■□□□□ 0.84
APOBEC3A-204ENST00000495988 ERC2O15083 957 aa20.31■□□□□ 0.84
APOBEC3A-204ENST00000495988 FLOT1O75955 427 aa20.31■□□□□ 0.84
APOBEC3A-204ENST00000495988 EEF2P13639 858 aaKnown RBP20.31■□□□□ 0.84
APOBEC3A-204ENST00000495988 CCND3P30281 292 aaPredicted RBP20.31■□□□□ 0.84
APOBEC3A-204ENST00000495988 DSG3P32926 999 aa20.31■□□□□ 0.84
APOBEC3A-204ENST00000495988 GRB14Q14449 540 aa20.31■□□□□ 0.84
APOBEC3A-204ENST00000495988 SBK1Q52WX2 424 aa20.31■□□□□ 0.84
APOBEC3A-204ENST00000495988 GIMAP6Q6P9H5 292 aa20.31■□□□□ 0.84
APOBEC3A-204ENST00000495988 MOV10L1Q9BXT6 1211 aaKnown RBP20.31■□□□□ 0.84
APOBEC3A-204ENST00000495988 KANSL2Q9H9L4 492 aa20.31■□□□□ 0.84
APOBEC3A-204ENST00000495988 WDR46O15213 610 aaKnown RBP20.3■□□□□ 0.84
APOBEC3A-204ENST00000495988 GPAA1O43292 621 aa20.3■□□□□ 0.84
APOBEC3A-204ENST00000495988 LRRFIP1Q32MZ4 808 aaKnown RBP20.3■□□□□ 0.84
APOBEC3A-204ENST00000495988 MFSD14CQ5VZR4 134 aa20.3■□□□□ 0.84
APOBEC3A-204ENST00000495988 STK11IPQ8N1F8 1099 aa20.3■□□□□ 0.84
APOBEC3A-204ENST00000495988 MB21D1Q8N884 522 aa20.3■□□□□ 0.84
APOBEC3A-204ENST00000495988 NBPF3Q9H094 633 aa20.3■□□□□ 0.84
APOBEC3A-204ENST00000495988 SPATC1LQ9H0A9 340 aa20.3■□□□□ 0.84
APOBEC3A-204ENST00000495988 FLRT1Q9NZU1 646 aa20.3■□□□□ 0.84
APOBEC3A-204ENST00000495988 MINDY4BA8MYZ0 360 aa20.29■□□□□ 0.84
APOBEC3A-204ENST00000495988 M0R2C6 588 aa20.29■□□□□ 0.84
APOBEC3A-204ENST00000495988 GNAT2P19087 354 aa20.29■□□□□ 0.84
APOBEC3A-204ENST00000495988 MNX1P50219 401 aaPredicted RBP20.29■□□□□ 0.84
APOBEC3A-204ENST00000495988 FXR1P51114 621 aaKnown RBP eCLIP20.29■□□□□ 0.84
APOBEC3A-204ENST00000495988 PLS1Q14651 629 aa20.29■□□□□ 0.84
APOBEC3A-204ENST00000495988 SAMD1Q6SPF0 538 aaPredicted RBP20.29■□□□□ 0.84
APOBEC3A-204ENST00000495988 PI4K2BQ8TCG2 481 aa20.29■□□□□ 0.84
APOBEC3A-204ENST00000495988 OTUD7AQ8TE49 926 aaPredicted RBP20.29■□□□□ 0.84
APOBEC3A-204ENST00000495988 ATG4CQ96DT6 458 aa20.29■□□□□ 0.84
APOBEC3A-204ENST00000495988 C11orf49Q9H6J7 331 aa20.29■□□□□ 0.84
APOBEC3A-204ENST00000495988 ALPK3Q96L96 1907 aa20.29■□□□□ 0.84
APOBEC3A-204ENST00000495988 HOXC6P09630 235 aa20.28■□□□□ 0.84
APOBEC3A-204ENST00000495988 ERCC3P19447 782 aa20.28■□□□□ 0.84
APOBEC3A-204ENST00000495988 TDO2P48775 406 aa20.28■□□□□ 0.84
APOBEC3A-204ENST00000495988 SHCBP1Q8NEM2 672 aa20.28■□□□□ 0.84
APOBEC3A-204ENST00000495988 NPLOC4Q8TAT6 608 aa20.28■□□□□ 0.84
APOBEC3A-204ENST00000495988 CRBNQ96SW2 442 aa20.28■□□□□ 0.84
APOBEC3A-204ENST00000495988 MKNK2Q9HBH9 465 aa20.28■□□□□ 0.84
APOBEC3A-204ENST00000495988 EPB41L4AQ9HCS5 686 aaPredicted RBP20.28■□□□□ 0.84
APOBEC3A-204ENST00000495988 GOPCQ9HD26 462 aa20.28■□□□□ 0.84
APOBEC3A-204ENST00000495988 PCDH10Q9P2E7 1040 aa20.28■□□□□ 0.84
APOBEC3A-204ENST00000495988 ROBO3Q96MS0 1386 aa20.28■□□□□ 0.84
APOBEC3A-204ENST00000495988 PARP14Q460N5 1801 aa20.27■□□□□ 0.84
APOBEC3A-204ENST00000495988 STRNO43815 780 aa20.27■□□□□ 0.84
APOBEC3A-204ENST00000495988 RAD21O60216 631 aa20.27■□□□□ 0.84
APOBEC3A-204ENST00000495988 APPP05067 770 aa20.27■□□□□ 0.84
APOBEC3A-204ENST00000495988 MX1P20591 662 aa20.27■□□□□ 0.84
APOBEC3A-204ENST00000495988 RASA1P20936 1047 aa20.27■□□□□ 0.84
APOBEC3A-204ENST00000495988 DPP9Q86TI2 863 aa20.27■□□□□ 0.84
APOBEC3A-204ENST00000495988 FSD1Q9BTV5 496 aa20.27■□□□□ 0.84
APOBEC3A-204ENST00000495988 RBM27Q9P2N5 1060 aaKnown RBP20.27■□□□□ 0.84
APOBEC3A-204ENST00000495988 ZBTB47Q9UFB7 747 aaPredicted RBP20.27■□□□□ 0.84
APOBEC3A-204ENST00000495988 GREB1LQ9C091 1923 aaPredicted RBP20.27■□□□□ 0.84
APOBEC3A-204ENST00000495988 ZNF236Q9UL36 1845 aa20.26■□□□□ 0.83
APOBEC3A-204ENST00000495988 ADORA2AP29274 412 aa20.26■□□□□ 0.83
APOBEC3A-204ENST00000495988 LHX8Q68G74 356 aa20.26■□□□□ 0.83
APOBEC3A-204ENST00000495988 NCAPG2Q86XI2 1143 aa20.26■□□□□ 0.83
APOBEC3A-204ENST00000495988 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.26■□□□□ 0.83
APOBEC3A-204ENST00000495988 MROH8Q9H579 483 aa20.26■□□□□ 0.83
APOBEC3A-204ENST00000495988 CNGA1P29973 690 aa20.25■□□□□ 0.83
APOBEC3A-204ENST00000495988 CYP2C19P33261 490 aa20.25■□□□□ 0.83
APOBEC3A-204ENST00000495988 C7orf61Q8IZ16 206 aa20.25■□□□□ 0.83
APOBEC3A-204ENST00000495988 IFNL3Q8IZI9 196 aa20.25■□□□□ 0.83
APOBEC3A-204ENST00000495988 SEC62Q99442 399 aaKnown RBP20.25■□□□□ 0.83
APOBEC3A-204ENST00000495988 FBXO28Q9NVF7 368 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms