RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 PPP4R3BQ5MIZ7 849 aa23.75■■□□□ 1.39
COL9A2-210ENST00000495948 TBC1D10CQ8IV04 446 aa23.75■■□□□ 1.39
COL9A2-210ENST00000495948 RNF41Q9H4P4 317 aaPredicted RBP23.75■■□□□ 1.39
COL9A2-210ENST00000495948 RPAP3Q9H6T3 665 aaPredicted RBP23.75■■□□□ 1.39
COL9A2-210ENST00000495948 GOPCQ9HD26 462 aa23.75■■□□□ 1.39
COL9A2-210ENST00000495948 MTMR4Q9NYA4 1195 aa23.75■■□□□ 1.39
COL9A2-210ENST00000495948 CTNNA3Q9UI47 895 aa23.75■■□□□ 1.39
COL9A2-210ENST00000495948 ZNF213O14771 459 aa23.74■■□□□ 1.39
COL9A2-210ENST00000495948 WDR46O15213 610 aaKnown RBP23.74■■□□□ 1.39
COL9A2-210ENST00000495948 CAP1Q01518 475 aa23.74■■□□□ 1.39
COL9A2-210ENST00000495948 TFAP4Q01664 338 aa23.74■■□□□ 1.39
COL9A2-210ENST00000495948 ATP2B2Q01814 1243 aa23.74■■□□□ 1.39
COL9A2-210ENST00000495948 FAM47AQ5JRC9 791 aa23.74■■□□□ 1.39
COL9A2-210ENST00000495948 AKNAD1Q5T1N1 836 aa23.74■■□□□ 1.39
COL9A2-210ENST00000495948 CATSPERGQ6ZRH7 1159 aa23.74■■□□□ 1.39
COL9A2-210ENST00000495948 EFCC1Q9HA90 598 aa23.74■■□□□ 1.39
COL9A2-210ENST00000495948 TRIM17Q9Y577 477 aa23.74■■□□□ 1.39
COL9A2-210ENST00000495948 TTLL1O95922 423 aa23.73■■□□□ 1.39
COL9A2-210ENST00000495948 IMMTQ16891 758 aaKnown RBP23.73■■□□□ 1.39
COL9A2-210ENST00000495948 KIAA1755Q5JYT7 1200 aa23.73■■□□□ 1.39
COL9A2-210ENST00000495948 ANKRD13CQ8N6S4 541 aa23.73■■□□□ 1.39
COL9A2-210ENST00000495948 MORF4L1Q9UBU8 362 aa23.73■■□□□ 1.39
COL9A2-210ENST00000495948 PARP14Q460N5 1801 aa23.73■■□□□ 1.39
COL9A2-210ENST00000495948 GNRH1P01148 92 aa23.72■■□□□ 1.39
COL9A2-210ENST00000495948 FBXO46Q6PJ61 603 aaPredicted RBP23.72■■□□□ 1.39
COL9A2-210ENST00000495948 LBX2Q6XYB7 198 aa23.72■■□□□ 1.39
COL9A2-210ENST00000495948 P2RX7Q99572 595 aaKnown RBP23.72■■□□□ 1.39
COL9A2-210ENST00000495948 TOMM22Q9NS69 142 aa23.72■■□□□ 1.39
COL9A2-210ENST00000495948 MGAMO43451 1857 aa23.72■■□□□ 1.39
COL9A2-210ENST00000495948 RLFQ13129 1914 aa23.71■■□□□ 1.39
COL9A2-210ENST00000495948 NEDD4P46934 1319 aa23.71■■□□□ 1.39
COL9A2-210ENST00000495948 RANBP6O60518 1105 aaKnown RBP23.71■■□□□ 1.39
COL9A2-210ENST00000495948 MFSD6Q6ZSS7 791 aa23.71■■□□□ 1.39
COL9A2-210ENST00000495948 MKL1Q969V6 931 aa23.71■■□□□ 1.39
COL9A2-210ENST00000495948 TANGO6Q9C0B7 1094 aa23.71■■□□□ 1.39
COL9A2-210ENST00000495948 ARHGAP39Q9C0H5 1083 aa23.71■■□□□ 1.39
COL9A2-210ENST00000495948 INCENPQ9NQS7 918 aa23.71■■□□□ 1.39
COL9A2-210ENST00000495948 MYPNQ86TC9 1320 aa23.7■■□□□ 1.38
COL9A2-210ENST00000495948 CTGFP29279 349 aa23.7■■□□□ 1.38
COL9A2-210ENST00000495948 RRP12Q5JTH9 1297 aaKnown RBP23.7■■□□□ 1.38
COL9A2-210ENST00000495948 SPICE1Q8N0Z3 855 aa23.7■■□□□ 1.38
COL9A2-210ENST00000495948 GMCL1P1Q8NEA9 526 aa23.7■■□□□ 1.38
COL9A2-210ENST00000495948 ESYT1Q9BSJ8 1104 aa23.7■■□□□ 1.38
COL9A2-210ENST00000495948 CLIP2Q9UDT6 1046 aa23.7■■□□□ 1.38
COL9A2-210ENST00000495948 U3KPZ7 1027 aaPredicted RBP23.7■■□□□ 1.38
COL9A2-210ENST00000495948 SPDYE16A6NNV3 312 aaPredicted RBP23.69■■□□□ 1.38
COL9A2-210ENST00000495948 CDC45O75419 566 aa23.69■■□□□ 1.38
COL9A2-210ENST00000495948 PSMC4P43686 418 aa23.69■■□□□ 1.38
COL9A2-210ENST00000495948 NOVP48745 357 aa23.69■■□□□ 1.38
COL9A2-210ENST00000495948 FCGRTP55899 365 aa23.69■■□□□ 1.38
COL9A2-210ENST00000495948 PTH1RQ03431 593 aa23.69■■□□□ 1.38
COL9A2-210ENST00000495948 ESR2Q92731 530 aa23.69■■□□□ 1.38
COL9A2-210ENST00000495948 ABHD8Q96I13 439 aa23.69■■□□□ 1.38
COL9A2-210ENST00000495948 TRIM47Q96LD4 638 aa23.69■■□□□ 1.38
COL9A2-210ENST00000495948 IL17RBQ9NRM6 502 aa23.69■■□□□ 1.38
COL9A2-210ENST00000495948 NDUFB10O96000 172 aa23.68■■□□□ 1.38
COL9A2-210ENST00000495948 PRMT2P55345 433 aa23.68■■□□□ 1.38
COL9A2-210ENST00000495948 CASC1Q6TDU7 716 aa23.68■■□□□ 1.38
COL9A2-210ENST00000495948 LRRC47Q8N1G4 583 aaKnown RBP23.68■■□□□ 1.38
COL9A2-210ENST00000495948 TXNRD2Q9NNW7 524 aa23.68■■□□□ 1.38
COL9A2-210ENST00000495948 TCP11L1Q9NUJ3 509 aa23.68■■□□□ 1.38
COL9A2-210ENST00000495948 ERVK-9P63128 1117 aa23.67■■□□□ 1.38
COL9A2-210ENST00000495948 ERVK-24P63145 666 aa23.67■■□□□ 1.38
COL9A2-210ENST00000495948 COG2Q14746 738 aa23.67■■□□□ 1.38
COL9A2-210ENST00000495948 STX8Q9UNK0 236 aa23.67■■□□□ 1.38
COL9A2-210ENST00000495948 PTPN22Q9Y2R2 807 aa23.67■■□□□ 1.38
COL9A2-210ENST00000495948 RABGAP1Q9Y3P9 1069 aa23.67■■□□□ 1.38
COL9A2-210ENST00000495948 F5H6K3 240 aa23.66■■□□□ 1.38
COL9A2-210ENST00000495948 NMT2O60551 498 aa23.66■■□□□ 1.38
COL9A2-210ENST00000495948 FLOT1O75955 427 aa23.66■■□□□ 1.38
COL9A2-210ENST00000495948 FMNL1O95466 1100 aaPredicted RBP23.66■■□□□ 1.38
COL9A2-210ENST00000495948 KLRC3Q07444 240 aa23.66■■□□□ 1.38
COL9A2-210ENST00000495948 POTEEQ6S8J3 1075 aa23.66■■□□□ 1.38
COL9A2-210ENST00000495948 GPRC5AQ8NFJ5 357 aa23.66■■□□□ 1.38
COL9A2-210ENST00000495948 MAP4K1Q92918 833 aa23.66■■□□□ 1.38
COL9A2-210ENST00000495948 PAGR1Q9BTK6 254 aa23.66■■□□□ 1.38
COL9A2-210ENST00000495948 CNNM2Q9H8M5 875 aa23.66■■□□□ 1.38
COL9A2-210ENST00000495948 RBPJLQ9UBG7 517 aa23.66■■□□□ 1.38
COL9A2-210ENST00000495948 HTTP42858 3142 aa23.66■■□□□ 1.38
COL9A2-210ENST00000495948 HOXD10P28358 340 aa23.65■■□□□ 1.38
COL9A2-210ENST00000495948 FAM83BQ5T0W9 1011 aa23.65■■□□□ 1.38
COL9A2-210ENST00000495948 KIAA1211Q6ZU35 1233 aa23.65■■□□□ 1.38
COL9A2-210ENST00000495948 MB21D1Q8N884 522 aa23.65■■□□□ 1.38
COL9A2-210ENST00000495948 LSG1Q9H089 658 aaKnown RBP23.65■■□□□ 1.38
COL9A2-210ENST00000495948 HOXC10Q9NYD6 342 aa23.65■■□□□ 1.38
COL9A2-210ENST00000495948 SRRDQ9UH36 339 aa23.65■■□□□ 1.38
COL9A2-210ENST00000495948 HPS5Q9UPZ3 1129 aa23.65■■□□□ 1.38
COL9A2-210ENST00000495948 TNPO2O14787 897 aaKnown RBP23.64■■□□□ 1.37
COL9A2-210ENST00000495948 RAD21O60216 631 aa23.64■■□□□ 1.37
COL9A2-210ENST00000495948 CNMDO75829 334 aa23.64■■□□□ 1.37
COL9A2-210ENST00000495948 CYP21A2P08686 494 aa23.64■■□□□ 1.37
COL9A2-210ENST00000495948 DSG3P32926 999 aa23.64■■□□□ 1.37
COL9A2-210ENST00000495948 KRT23Q9C075 422 aa23.64■■□□□ 1.37
COL9A2-210ENST00000495948 NKX2-3Q8TAU0 364 aa23.63■■□□□ 1.37
COL9A2-210ENST00000495948 ATG4CQ96DT6 458 aa23.63■■□□□ 1.37
COL9A2-210ENST00000495948 GMCL1Q96IK5 515 aa23.63■■□□□ 1.37
COL9A2-210ENST00000495948 PPP1R9AQ9ULJ8 1098 aa23.63■■□□□ 1.37
COL9A2-210ENST00000495948 RBM8AQ9Y5S9 174 aaKnown RBP23.63■■□□□ 1.37
COL9A2-210ENST00000495948 PTCH2Q9Y6C5 1203 aa23.63■■□□□ 1.37
COL9A2-210ENST00000495948 B4E1Z4 1266 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms