RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 TEX11Q8IYF3 940 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 MICALL1Q8N3F8 863 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 FRAT1Q92837 279 aaPredicted RBP12.63□□□□□ -0.39
C9orf78-207ENST00000495934 API5Q9BZZ5 524 aaKnown RBP12.63□□□□□ -0.39
C9orf78-207ENST00000495934 DNAJC18Q9H819 358 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 BTBD7Q9P203 1132 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 ZBTB21Q9ULJ3 1066 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 CDK5RAP2Q96SN8 1893 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 A0A1W2PQ45 241 aaPredicted RBP12.62□□□□□ -0.39
C9orf78-207ENST00000495934 A0A1W2PQY0 241 aa12.62□□□□□ -0.39
C9orf78-207ENST00000495934 ADORA2AP29274 412 aa12.62□□□□□ -0.39
C9orf78-207ENST00000495934 ZYXQ15942 572 aaKnown RBP12.62□□□□□ -0.39
C9orf78-207ENST00000495934 PRAMEF19Q5SWL8 479 aa12.62□□□□□ -0.39
C9orf78-207ENST00000495934 SLC44A5Q8NCS7 719 aa12.62□□□□□ -0.39
C9orf78-207ENST00000495934 TRIM34Q9BYJ4 488 aa12.62□□□□□ -0.39
C9orf78-207ENST00000495934 GINM1Q9NU53 330 aa12.62□□□□□ -0.39
C9orf78-207ENST00000495934 MSRAQ9UJ68 235 aa12.62□□□□□ -0.39
C9orf78-207ENST00000495934 FAM86C2PA6NEL3 165 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 IPO8O15397 1037 aaKnown RBP12.61□□□□□ -0.39
C9orf78-207ENST00000495934 CIAO1O76071 339 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 TIMP1P01033 207 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 LDHCP07864 332 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 GSTO1P78417 241 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 FAAP100Q0VG06 881 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 PPIGQ13427 754 aaKnown RBP eCLIP12.61□□□□□ -0.39
C9orf78-207ENST00000495934 RAB30Q15771 203 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 TMEM240Q5SV17 173 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 RASIP1Q5U651 963 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 ZKSCAN2Q63HK3 967 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 CCDC174Q6PII3 467 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 CATSPERGQ6ZRH7 1159 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 CRACR2BQ8N4Y2 399 aaPredicted RBP12.61□□□□□ -0.39
C9orf78-207ENST00000495934 CLUAP1Q96AJ1 413 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 C12orf42Q96LP6 360 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 FEZ1Q99689 392 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 DHX36Q9H2U1 1008 aaKnown RBP12.61□□□□□ -0.39
C9orf78-207ENST00000495934 NKX2-4Q9H2Z4 354 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 C11orf16Q9NQ32 467 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 XPNPEP3Q9NQH7 507 aa12.61□□□□□ -0.39
C9orf78-207ENST00000495934 ZNFX1Q9P2E3 1918 aaKnown RBP12.6□□□□□ -0.39
C9orf78-207ENST00000495934 FOCADQ5VW36 1801 aa12.6□□□□□ -0.39
C9orf78-207ENST00000495934 LRRC37A2A6NM11 1700 aa12.6□□□□□ -0.39
C9orf78-207ENST00000495934 WDFY4Q6ZS81 3184 aa12.6□□□□□ -0.39
C9orf78-207ENST00000495934 DCDC2CA8MYV0 355 aa12.6□□□□□ -0.39
C9orf78-207ENST00000495934 GPR37L1O60883 481 aa12.6□□□□□ -0.39
C9orf78-207ENST00000495934 RARBP10826 455 aa12.6□□□□□ -0.39
C9orf78-207ENST00000495934 SKIV2LQ15477 1246 aaKnown RBP12.6□□□□□ -0.39
C9orf78-207ENST00000495934 MFSD5Q6N075 450 aa12.6□□□□□ -0.39
C9orf78-207ENST00000495934 LBX2Q6XYB7 198 aa12.6□□□□□ -0.39
C9orf78-207ENST00000495934 C16orf59Q7L2K0 433 aa12.6□□□□□ -0.39
C9orf78-207ENST00000495934 ANKRD33Q7Z3H0 272 aa12.6□□□□□ -0.39
C9orf78-207ENST00000495934 SH3RF3Q8TEJ3 882 aaPredicted RBP12.6□□□□□ -0.39
C9orf78-207ENST00000495934 NSUN4Q96CB9 384 aaKnown RBP12.6□□□□□ -0.39
C9orf78-207ENST00000495934 TOX2Q96NM4 488 aa12.6□□□□□ -0.39
C9orf78-207ENST00000495934 SLC28A3Q9HAS3 691 aa12.6□□□□□ -0.39
C9orf78-207ENST00000495934 FBXO3Q9UK99 471 aa12.6□□□□□ -0.39
C9orf78-207ENST00000495934 BRWD1Q9NSI6 2320 aa12.59□□□□□ -0.39
C9orf78-207ENST00000495934 SPDYE16A6NNV3 312 aaPredicted RBP12.59□□□□□ -0.39
C9orf78-207ENST00000495934 STRNO43815 780 aa12.59□□□□□ -0.39
C9orf78-207ENST00000495934 COBLO75128 1261 aa12.59□□□□□ -0.39
C9orf78-207ENST00000495934 PGK1P00558 417 aa12.59□□□□□ -0.39
C9orf78-207ENST00000495934 VCAM1P19320 739 aa12.59□□□□□ -0.39
C9orf78-207ENST00000495934 MRE11P49959 708 aa12.59□□□□□ -0.39
C9orf78-207ENST00000495934 RNF180Q86T96 592 aa12.59□□□□□ -0.39
C9orf78-207ENST00000495934 METTL16Q86W50 562 aaKnown RBP12.59□□□□□ -0.39
C9orf78-207ENST00000495934 TMEM57Q8N5G2 664 aa12.59□□□□□ -0.39
C9orf78-207ENST00000495934 SLC5A4Q9NY91 659 aa12.59□□□□□ -0.39
C9orf78-207ENST00000495934 ERC2O15083 957 aa12.58□□□□□ -0.4
C9orf78-207ENST00000495934 GH2P01242 217 aa12.58□□□□□ -0.4
C9orf78-207ENST00000495934 USP14P54578 494 aa12.58□□□□□ -0.4
C9orf78-207ENST00000495934 PSRC1Q6PGN9 363 aaPredicted RBP12.58□□□□□ -0.4
C9orf78-207ENST00000495934 FOXP4Q8IVH2 680 aaPredicted RBP12.58□□□□□ -0.4
C9orf78-207ENST00000495934 PANK1Q8TE04 598 aa12.58□□□□□ -0.4
C9orf78-207ENST00000495934 MEIS3Q99687 375 aa12.58□□□□□ -0.4
C9orf78-207ENST00000495934 NOL10Q9BSC4 688 aaKnown RBP12.58□□□□□ -0.4
C9orf78-207ENST00000495934 MOV10L1Q9BXT6 1211 aaKnown RBP12.58□□□□□ -0.4
C9orf78-207ENST00000495934 RAI14Q9P0K7 980 aa12.58□□□□□ -0.4
C9orf78-207ENST00000495934 TBX21Q9UL17 535 aa12.58□□□□□ -0.4
C9orf78-207ENST00000495934 YBX2Q9Y2T7 364 aaKnown RBP12.58□□□□□ -0.4
C9orf78-207ENST00000495934 ACRP10323 421 aa12.57□□□□□ -0.4
C9orf78-207ENST00000495934 CSF2RAP15509 400 aa12.57□□□□□ -0.4
C9orf78-207ENST00000495934 IL15P40933 162 aaPredicted RBP12.57□□□□□ -0.4
C9orf78-207ENST00000495934 TIMM10P62072 90 aa12.57□□□□□ -0.4
C9orf78-207ENST00000495934 C20orf194Q5TEA3 1177 aa12.57□□□□□ -0.4
C9orf78-207ENST00000495934 PI16Q6UXB8 463 aa12.57□□□□□ -0.4
C9orf78-207ENST00000495934 TBC1D9Q6ZT07 1266 aa12.57□□□□□ -0.4
C9orf78-207ENST00000495934 ZNF365Q70YC5 407 aa12.57□□□□□ -0.4
C9orf78-207ENST00000495934 MAPKAPK5Q8IW41 473 aa12.57□□□□□ -0.4
C9orf78-207ENST00000495934 HERVK_113Q902F9 699 aa12.57□□□□□ -0.4
C9orf78-207ENST00000495934 KHSRPQ92945 711 aaKnown RBP eCLIP12.57□□□□□ -0.4
C9orf78-207ENST00000495934 RPAP3Q9H6T3 665 aaPredicted RBP12.57□□□□□ -0.4
C9orf78-207ENST00000495934 STARD7Q9NQZ5 370 aa12.57□□□□□ -0.4
C9orf78-207ENST00000495934 PALD1Q9ULE6 856 aa12.57□□□□□ -0.4
C9orf78-207ENST00000495934 FLT1P17948 1338 aa12.57□□□□□ -0.4
C9orf78-207ENST00000495934 APBB1O00213 710 aa12.56□□□□□ -0.4
C9orf78-207ENST00000495934 ERCC3P19447 782 aa12.56□□□□□ -0.4
C9orf78-207ENST00000495934 TMEM199Q8N511 208 aa12.56□□□□□ -0.4
C9orf78-207ENST00000495934 SHCBP1Q8NEM2 672 aa12.56□□□□□ -0.4
C9orf78-207ENST00000495934 TGFBRAP1Q8WUH2 860 aa12.56□□□□□ -0.4
C9orf78-207ENST00000495934 MAML3Q96JK9 1138 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms