RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 UNC93B1Q9H1C4 597 aa28.98■■■□□ 2.23
HLA-C-209ENST00000495835 VCPKMTQ9H867 229 aa28.98■■■□□ 2.23
HLA-C-209ENST00000495835 SPDYE16A6NNV3 312 aaPredicted RBP28.97■■■□□ 2.23
HLA-C-209ENST00000495835 M0R2C6 588 aa28.97■■■□□ 2.23
HLA-C-209ENST00000495835 CNMDO75829 334 aa28.97■■■□□ 2.23
HLA-C-209ENST00000495835 SGPL1O95470 568 aa28.97■■■□□ 2.23
HLA-C-209ENST00000495835 GPR142Q7Z601 462 aa28.97■■■□□ 2.23
HLA-C-209ENST00000495835 SMC5Q8IY18 1101 aa28.97■■■□□ 2.23
HLA-C-209ENST00000495835 EVI5LQ96CN4 794 aa28.97■■■□□ 2.23
HLA-C-209ENST00000495835 SHISA4Q96DD7 197 aa28.97■■■□□ 2.23
HLA-C-209ENST00000495835 PORCNQ9H237 461 aa28.97■■■□□ 2.23
HLA-C-209ENST00000495835 SMIM22K7EJ46 135 aa28.96■■■□□ 2.23
HLA-C-209ENST00000495835 TDO2P48775 406 aa28.96■■■□□ 2.23
HLA-C-209ENST00000495835 PDE1AP54750 535 aa28.96■■■□□ 2.23
HLA-C-209ENST00000495835 U2AF1L4Q8WU68 220 aaKnown RBP28.96■■■□□ 2.23
HLA-C-209ENST00000495835 USP6NLQ92738 828 aa28.96■■■□□ 2.23
HLA-C-209ENST00000495835 MKNK2Q9HBH9 465 aa28.96■■■□□ 2.23
HLA-C-209ENST00000495835 PAK6Q9NQU5 681 aaPredicted RBP28.96■■■□□ 2.23
HLA-C-209ENST00000495835 MINDY4BA8MYZ0 360 aa28.95■■■□□ 2.22
HLA-C-209ENST00000495835 WDR46O15213 610 aaKnown RBP28.95■■■□□ 2.22
HLA-C-209ENST00000495835 APPP05067 770 aa28.95■■■□□ 2.22
HLA-C-209ENST00000495835 MORN1Q5T089 497 aa28.95■■■□□ 2.22
HLA-C-209ENST00000495835 IFNL3Q8IZI9 196 aa28.95■■■□□ 2.22
HLA-C-209ENST00000495835 MB21D1Q8N884 522 aa28.95■■■□□ 2.22
HLA-C-209ENST00000495835 EPB41L4AQ9HCS5 686 aaPredicted RBP28.95■■■□□ 2.22
HLA-C-209ENST00000495835 GREB1LQ9C091 1923 aaPredicted RBP28.94■■■□□ 2.22
HLA-C-209ENST00000495835 PEX10O60683 326 aa28.94■■■□□ 2.22
HLA-C-209ENST00000495835 RLFQ13129 1914 aa28.94■■■□□ 2.22
HLA-C-209ENST00000495835 RPTORQ8N122 1335 aa28.94■■■□□ 2.22
HLA-C-209ENST00000495835 EEF2P13639 858 aaKnown RBP28.93■■■□□ 2.22
HLA-C-209ENST00000495835 RASA1P20936 1047 aa28.93■■■□□ 2.22
HLA-C-209ENST00000495835 RGS2P41220 211 aa28.93■■■□□ 2.22
HLA-C-209ENST00000495835 TANGO6Q9C0B7 1094 aa28.93■■■□□ 2.22
HLA-C-209ENST00000495835 CWC22Q9HCG8 908 aaKnown RBP28.93■■■□□ 2.22
HLA-C-209ENST00000495835 GOPCQ9HD26 462 aa28.93■■■□□ 2.22
HLA-C-209ENST00000495835 BTBD7Q9P203 1132 aa28.93■■■□□ 2.22
HLA-C-209ENST00000495835 CYP2B6P20813 491 aa28.92■■■□□ 2.22
HLA-C-209ENST00000495835 DSG3P32926 999 aa28.92■■■□□ 2.22
HLA-C-209ENST00000495835 UBE2Q1Q7Z7E8 422 aa28.92■■■□□ 2.22
HLA-C-209ENST00000495835 SEC62Q99442 399 aaKnown RBP28.92■■■□□ 2.22
HLA-C-209ENST00000495835 HMX1Q9NP08 348 aaPredicted RBP28.92■■■□□ 2.22
HLA-C-209ENST00000495835 NYAP2Q9P242 653 aa28.92■■■□□ 2.22
HLA-C-209ENST00000495835 SLC15A5A6NIM6 579 aa28.91■■■□□ 2.22
HLA-C-209ENST00000495835 KIAA1755Q5JYT7 1200 aa28.91■■■□□ 2.22
HLA-C-209ENST00000495835 ZNF444Q8N0Y2 327 aaPredicted RBP28.91■■■□□ 2.22
HLA-C-209ENST00000495835 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.91■■■□□ 2.22
HLA-C-209ENST00000495835 CRISPLD2Q9H0B8 497 aa28.91■■■□□ 2.22
HLA-C-209ENST00000495835 A0A0G2JMZ2 1700 aa28.9■■■□□ 2.22
HLA-C-209ENST00000495835 SLC3A2P08195 630 aaKnown RBP28.9■■■□□ 2.22
HLA-C-209ENST00000495835 PTPREP23469 700 aa28.9■■■□□ 2.22
HLA-C-209ENST00000495835 CLEC10AQ8IUN9 316 aa28.9■■■□□ 2.22
HLA-C-209ENST00000495835 SHCBP1Q8NEM2 672 aa28.9■■■□□ 2.22
HLA-C-209ENST00000495835 TRIB2Q92519 343 aa28.9■■■□□ 2.22
HLA-C-209ENST00000495835 DEFB118Q96PH6 123 aa28.9■■■□□ 2.22
HLA-C-209ENST00000495835 APBA2Q99767 749 aa28.9■■■□□ 2.22
HLA-C-209ENST00000495835 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.9■■■□□ 2.22
HLA-C-209ENST00000495835 NAPBQ9H115 298 aa28.9■■■□□ 2.22
HLA-C-209ENST00000495835 HELLSQ9NRZ9 838 aa28.9■■■□□ 2.22
HLA-C-209ENST00000495835 IVNS1ABPQ9Y6Y0 642 aa28.9■■■□□ 2.22
HLA-C-209ENST00000495835 STRNO43815 780 aa28.89■■■□□ 2.22
HLA-C-209ENST00000495835 FLOT1O75955 427 aa28.89■■■□□ 2.22
HLA-C-209ENST00000495835 PDE4BQ07343 736 aa28.89■■■□□ 2.22
HLA-C-209ENST00000495835 MAP2K5Q13163 448 aa28.89■■■□□ 2.22
HLA-C-209ENST00000495835 MAP3K21Q5TCX8 1036 aa28.89■■■□□ 2.22
HLA-C-209ENST00000495835 EXOC6Q8TAG9 804 aa28.89■■■□□ 2.22
HLA-C-209ENST00000495835 SYNPO2Q9UMS6 1093 aa28.89■■■□□ 2.22
HLA-C-209ENST00000495835 TFRCP02786 760 aaKnown RBP28.88■■■□□ 2.21
HLA-C-209ENST00000495835 ATP2B2Q01814 1243 aa28.88■■■□□ 2.21
HLA-C-209ENST00000495835 SPICE1Q8N0Z3 855 aa28.88■■■□□ 2.21
HLA-C-209ENST00000495835 SPATC1LQ9H0A9 340 aa28.88■■■□□ 2.21
HLA-C-209ENST00000495835 PARP14Q460N5 1801 aa28.87■■■□□ 2.21
HLA-C-209ENST00000495835 HOXC6P09630 235 aa28.87■■■□□ 2.21
HLA-C-209ENST00000495835 ZKSCAN1P17029 563 aaPredicted RBP28.87■■■□□ 2.21
HLA-C-209ENST00000495835 ANKLE1Q8NAG6 615 aa28.87■■■□□ 2.21
HLA-C-209ENST00000495835 HTATIP2Q9BUP3 242 aa28.87■■■□□ 2.21
HLA-C-209ENST00000495835 LNPKQ9C0E8 428 aa28.87■■■□□ 2.21
HLA-C-209ENST00000495835 ADAMTS5Q9UNA0 930 aa28.87■■■□□ 2.21
HLA-C-209ENST00000495835 IGKV6D-41A0A0C4DH26 115 aa28.86■■■□□ 2.21
HLA-C-209ENST00000495835 NUCB1Q02818 461 aa28.86■■■□□ 2.21
HLA-C-209ENST00000495835 GRB14Q14449 540 aa28.86■■■□□ 2.21
HLA-C-209ENST00000495835 CHD1LQ86WJ1 897 aa28.86■■■□□ 2.21
HLA-C-209ENST00000495835 MKL1Q969V6 931 aa28.86■■■□□ 2.21
HLA-C-209ENST00000495835 MOV10L1Q9BXT6 1211 aaKnown RBP28.86■■■□□ 2.21
HLA-C-209ENST00000495835 OSBPL3Q9H4L5 887 aa28.86■■■□□ 2.21
HLA-C-209ENST00000495835 MROH8Q9H579 483 aa28.86■■■□□ 2.21
HLA-C-209ENST00000495835 FARP2O94887 1054 aaPredicted RBP28.85■■■□□ 2.21
HLA-C-209ENST00000495835 WDR78Q5VTH9 848 aa28.85■■■□□ 2.21
HLA-C-209ENST00000495835 IGHDP01880 384 aa28.84■■■□□ 2.21
HLA-C-209ENST00000495835 PPARAQ07869 468 aa28.84■■■□□ 2.21
HLA-C-209ENST00000495835 PLIN4Q96Q06 1357 aa28.84■■■□□ 2.21
HLA-C-209ENST00000495835 ZNF236Q9UL36 1845 aa28.83■■■□□ 2.21
HLA-C-209ENST00000495835 SLC25A27O95847 323 aa28.83■■■□□ 2.21
HLA-C-209ENST00000495835 PRKAR2AP13861 404 aaKnown RBP28.83■■■□□ 2.21
HLA-C-209ENST00000495835 TRIM32Q13049 653 aa28.83■■■□□ 2.21
HLA-C-209ENST00000495835 ALX1Q15699 326 aa28.83■■■□□ 2.21
HLA-C-209ENST00000495835 PPP4R3BQ5MIZ7 849 aa28.83■■■□□ 2.21
HLA-C-209ENST00000495835 ABRAQ8N0Z2 381 aa28.83■■■□□ 2.21
HLA-C-209ENST00000495835 STK11IPQ8N1F8 1099 aa28.83■■■□□ 2.21
HLA-C-209ENST00000495835 NEDD1Q8NHV4 660 aa28.83■■■□□ 2.21
HLA-C-209ENST00000495835 ATG4CQ96DT6 458 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms