RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 PALM3A6NDB9 673 aaPredicted RBP28.25■■■□□ 2.11
PPP1R3F-205ENST00000495799 MAP3K10Q02779 954 aa28.25■■■□□ 2.11
PPP1R3F-205ENST00000495799 ICA1Q05084 483 aa28.25■■■□□ 2.11
PPP1R3F-205ENST00000495799 SRBD1Q8N5C6 995 aaKnown RBP28.25■■■□□ 2.11
PPP1R3F-205ENST00000495799 DDNO94850 711 aaPredicted RBP28.24■■■□□ 2.11
PPP1R3F-205ENST00000495799 SLURP2P0DP57 97 aa28.24■■■□□ 2.11
PPP1R3F-205ENST00000495799 GUCY1B3Q02153 619 aa28.24■■■□□ 2.11
PPP1R3F-205ENST00000495799 ASPRV1Q53RT3 343 aa28.24■■■□□ 2.11
PPP1R3F-205ENST00000495799 CMTR1Q8N1G2 835 aaKnown RBP28.24■■■□□ 2.11
PPP1R3F-205ENST00000495799 MKL1Q969V6 931 aa28.24■■■□□ 2.11
PPP1R3F-205ENST00000495799 ADARB2Q9NS39 739 aaKnown RBP28.24■■■□□ 2.11
PPP1R3F-205ENST00000495799 SYNPO2Q9UMS6 1093 aa28.24■■■□□ 2.11
PPP1R3F-205ENST00000495799 PPP2R3BQ9Y5P8 575 aa28.24■■■□□ 2.11
PPP1R3F-205ENST00000495799 GDF11O95390 407 aa28.23■■■□□ 2.11
PPP1R3F-205ENST00000495799 SMARCA1P28370 1054 aa28.23■■■□□ 2.11
PPP1R3F-205ENST00000495799 KRT85P78386 507 aa28.23■■■□□ 2.11
PPP1R3F-205ENST00000495799 ATP2B2Q01814 1243 aa28.23■■■□□ 2.11
PPP1R3F-205ENST00000495799 LRRC47Q8N1G4 583 aaKnown RBP28.23■■■□□ 2.11
PPP1R3F-205ENST00000495799 TRPM4Q8TD43 1214 aa28.23■■■□□ 2.11
PPP1R3F-205ENST00000495799 EPS15P42566 896 aa28.23■■■□□ 2.11
PPP1R3F-205ENST00000495799 SEPT2Q15019 361 aa28.23■■■□□ 2.11
PPP1R3F-205ENST00000495799 SAFBQ15424 915 aaKnown RBP eCLIP28.23■■■□□ 2.11
PPP1R3F-205ENST00000495799 FOXD4L6Q3SYB3 417 aaPredicted RBP28.23■■■□□ 2.11
PPP1R3F-205ENST00000495799 KRT40Q6A162 431 aa28.23■■■□□ 2.11
PPP1R3F-205ENST00000495799 FOXD4L3Q6VB84 417 aaPredicted RBP28.23■■■□□ 2.11
PPP1R3F-205ENST00000495799 DEFB129Q9H1M3 183 aa28.23■■■□□ 2.11
PPP1R3F-205ENST00000495799 MTMR7Q9Y216 660 aa28.23■■■□□ 2.11
PPP1R3F-205ENST00000495799 GH2P01242 217 aa28.22■■■□□ 2.11
PPP1R3F-205ENST00000495799 PDHBP11177 359 aa28.22■■■□□ 2.11
PPP1R3F-205ENST00000495799 SKOR2Q2VWA4 1001 aaPredicted RBP28.22■■■□□ 2.11
PPP1R3F-205ENST00000495799 ATL3Q6DD88 541 aa28.22■■■□□ 2.11
PPP1R3F-205ENST00000495799 BRAPQ7Z569 592 aa28.22■■■□□ 2.11
PPP1R3F-205ENST00000495799 TEPSINQ96N21 525 aa28.22■■■□□ 2.11
PPP1R3F-205ENST00000495799 V9GY48 417 aaPredicted RBP28.22■■■□□ 2.11
PPP1R3F-205ENST00000495799 PITPNM2Q9BZ72 1349 aa28.21■■■□□ 2.11
PPP1R3F-205ENST00000495799 MYH15Q9Y2K3 1946 aa28.21■■■□□ 2.11
PPP1R3F-205ENST00000495799 SNHG28P0DPA3 235 aa28.21■■■□□ 2.11
PPP1R3F-205ENST00000495799 EEF2P13639 858 aaKnown RBP28.21■■■□□ 2.11
PPP1R3F-205ENST00000495799 ANGEL2Q5VTE6 544 aaKnown RBP28.21■■■□□ 2.11
PPP1R3F-205ENST00000495799 DCAF15Q66K64 600 aa28.21■■■□□ 2.11
PPP1R3F-205ENST00000495799 AIFM3Q96NN9 605 aa28.21■■■□□ 2.11
PPP1R3F-205ENST00000495799 SPZ1Q9BXG8 430 aa28.21■■■□□ 2.11
PPP1R3F-205ENST00000495799 GINM1Q9NU53 330 aa28.21■■■□□ 2.11
PPP1R3F-205ENST00000495799 KLRF2D3W0D1 207 aa28.2■■■□□ 2.1
PPP1R3F-205ENST00000495799 NCLP19338 710 aaKnown RBP28.2■■■□□ 2.1
PPP1R3F-205ENST00000495799 CLEC10AQ8IUN9 316 aa28.2■■■□□ 2.1
PPP1R3F-205ENST00000495799 STAG2Q8N3U4 1231 aa28.2■■■□□ 2.1
PPP1R3F-205ENST00000495799 ARHGEF10LQ9HCE6 1279 aa28.2■■■□□ 2.1
PPP1R3F-205ENST00000495799 ASTN2O75129 1339 aaPredicted RBP28.2■■■□□ 2.1
PPP1R3F-205ENST00000495799 GUCY1A2P33402 732 aa28.19■■■□□ 2.1
PPP1R3F-205ENST00000495799 DNM1Q05193 864 aaKnown RBP28.19■■■□□ 2.1
PPP1R3F-205ENST00000495799 GNL2Q13823 731 aaKnown RBP28.19■■■□□ 2.1
PPP1R3F-205ENST00000495799 GPATCH4Q5T3I0 446 aaKnown RBP28.19■■■□□ 2.1
PPP1R3F-205ENST00000495799 OTUD7BQ6GQQ9 843 aa28.19■■■□□ 2.1
PPP1R3F-205ENST00000495799 TMEM87AQ8NBN3 555 aa28.19■■■□□ 2.1
PPP1R3F-205ENST00000495799 DCAF4Q8WV16 495 aa28.19■■■□□ 2.1
PPP1R3F-205ENST00000495799 GGA3Q9NZ52 723 aa28.19■■■□□ 2.1
PPP1R3F-205ENST00000495799 ZBTB21Q9ULJ3 1066 aa28.19■■■□□ 2.1
PPP1R3F-205ENST00000495799 SCG2P13521 617 aa28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 PKN1Q16512 942 aa28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 PFKFB3Q16875 520 aaPredicted RBP28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 USP17L2Q6R6M4 530 aa28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 MIGA2Q7L4E1 593 aa28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 FAM177A1Q8N128 213 aaPredicted RBP28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 L3MBTL3Q96JM7 780 aaPredicted RBP28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 ZNF396Q96N95 335 aaPredicted RBP28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 CFAP45Q9UL16 551 aa28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 USP17L5A8MUK1 530 aa28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 MMP1P03956 469 aa28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 CAP2P40123 477 aa28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 KIF23Q02241 960 aaPredicted RBP28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 CDAN1Q8IWY9 1227 aa28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 SCAND2PQ9GZW5 306 aaPredicted RBP28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 CNPY2Q9Y2B0 182 aa28.18■■■□□ 2.1
PPP1R3F-205ENST00000495799 TCHHQ07283 1943 aa28.17■■■□□ 2.1
PPP1R3F-205ENST00000495799 PRPF40AO75400 957 aaKnown RBP28.17■■■□□ 2.1
PPP1R3F-205ENST00000495799 ASNSP08243 561 aa28.17■■■□□ 2.1
PPP1R3F-205ENST00000495799 RRP1BQ14684 758 aaKnown RBP28.17■■■□□ 2.1
PPP1R3F-205ENST00000495799 GMCL1P1Q8NEA9 526 aa28.17■■■□□ 2.1
PPP1R3F-205ENST00000495799 SH2D4AQ9H788 454 aa28.17■■■□□ 2.1
PPP1R3F-205ENST00000495799 BRMS1Q9HCU9 246 aa28.17■■■□□ 2.1
PPP1R3F-205ENST00000495799 LMBRD1Q9NUN5 540 aa28.17■■■□□ 2.1
PPP1R3F-205ENST00000495799 ZNF543Q08ER8 600 aa28.16■■■□□ 2.1
PPP1R3F-205ENST00000495799 GOLGA8HP0CJ92 632 aa28.15■■■□□ 2.1
PPP1R3F-205ENST00000495799 HIRAP54198 1017 aaPredicted RBP28.15■■■□□ 2.1
PPP1R3F-205ENST00000495799 CCDC96Q2M329 555 aa28.15■■■□□ 2.1
PPP1R3F-205ENST00000495799 RRP36Q96EU6 259 aaKnown RBP28.15■■■□□ 2.1
PPP1R3F-205ENST00000495799 CHAMP1Q96JM3 812 aa28.15■■■□□ 2.1
PPP1R3F-205ENST00000495799 ZNF341Q9BYN7 854 aa28.15■■■□□ 2.1
PPP1R3F-205ENST00000495799 SH3GLB2Q9NR46 395 aa28.15■■■□□ 2.1
PPP1R3F-205ENST00000495799 GJB4Q9NTQ9 266 aa28.15■■■□□ 2.1
PPP1R3F-205ENST00000495799 ATAD5Q96QE3 1844 aa28.15■■■□□ 2.1
PPP1R3F-205ENST00000495799 UBE2Q2LH0YL09 131 aa28.14■■■□□ 2.1
PPP1R3F-205ENST00000495799 SOCS7O14512 581 aa28.14■■■□□ 2.1
PPP1R3F-205ENST00000495799 FIBPO43427 364 aa28.14■■■□□ 2.1
PPP1R3F-205ENST00000495799 TRAK2O60296 914 aa28.14■■■□□ 2.1
PPP1R3F-205ENST00000495799 SHROOM1Q2M3G4 852 aaPredicted RBP28.14■■■□□ 2.1
PPP1R3F-205ENST00000495799 SLFN13Q68D06 897 aa28.14■■■□□ 2.1
PPP1R3F-205ENST00000495799 FOXP1Q9H334 677 aaPredicted RBP28.14■■■□□ 2.1
PPP1R3F-205ENST00000495799 SEC63Q9UGP8 760 aaKnown RBP28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms