RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 SAMD7Q7Z3H4 446 aa12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 CTU1Q7Z7A3 348 aaKnown RBP12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 FANCBQ8NB91 859 aa12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 DCPSQ96C86 337 aaKnown RBP12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 IL17RBQ9NRM6 502 aa12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 RBM28Q9NW13 759 aaKnown RBP12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 ORC3Q9UBD5 711 aaPredicted RBP12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 STK36Q9NRP7 1315 aa12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 PLIN4Q96Q06 1357 aa12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 MYH6P13533 1939 aa12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 TCHHQ07283 1943 aa12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 ATRNL1Q5VV63 1379 aa12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 H3BQV1 296 aa12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 IFNAR1P17181 557 aa12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 CACNB3P54284 484 aa12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 SSRP1Q08945 709 aaKnown RBP12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 TROAPQ12815 778 aa12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 SPDYE2Q495Y8 402 aa12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 TBC1D10BQ4KMP7 808 aaPredicted RBP12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 FKBP1CQ5VVH2 108 aa12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 FOXP4Q8IVH2 680 aaPredicted RBP12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 ZFPM1Q8IX07 1006 aa12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 CCDC144CPQ8IYA2 1237 aa12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 REM2Q8IYK8 340 aaPredicted RBP12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 NUP133Q8WUM0 1156 aa12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 ZBED3Q96IU2 234 aaPredicted RBP12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 MAP3K14Q99558 947 aa12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 KAT14Q9H8E8 782 aa12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 PI4KBQ9UBF8 816 aa12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 ZNF70Q9UC06 446 aaPredicted RBP12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 GREB1LQ9C091 1923 aaPredicted RBP12.49□□□□□ -0.41
ECHDC3-204ENST00000495787 DDTLA6NHG4 134 aaPredicted RBP12.48□□□□□ -0.41
ECHDC3-204ENST00000495787 ADM5C9JUS6 153 aa12.48□□□□□ -0.41
ECHDC3-204ENST00000495787 FMNL1O95466 1100 aaPredicted RBP12.48□□□□□ -0.41
ECHDC3-204ENST00000495787 SLC10A3P09131 477 aa12.48□□□□□ -0.41
ECHDC3-204ENST00000495787 SHMT1P34896 483 aa12.48□□□□□ -0.41
ECHDC3-204ENST00000495787 ZNF280AP59817 542 aaPredicted RBP12.48□□□□□ -0.41
ECHDC3-204ENST00000495787 TCP10Q12799 353 aa12.48□□□□□ -0.41
ECHDC3-204ENST00000495787 MCTP1Q6DN14 999 aa12.48□□□□□ -0.41
ECHDC3-204ENST00000495787 SH3BP5LQ7L8J4 393 aa12.48□□□□□ -0.41
ECHDC3-204ENST00000495787 CCDC17Q96LX7 622 aa12.48□□□□□ -0.41
ECHDC3-204ENST00000495787 MYH15Q9Y2K3 1946 aa12.48□□□□□ -0.41
ECHDC3-204ENST00000495787 MYO1BO43795 1136 aa12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 EGFRP00533 1210 aa12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 NOVP48745 357 aa12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 METTL16Q86W50 562 aaKnown RBP12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 SULF1Q8IWU6 871 aa12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 ZSCAN29Q8IWY8 852 aaPredicted RBP12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 TRIM22Q8IYM9 498 aa12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 CRACR2BQ8N4Y2 399 aaPredicted RBP12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 CTCFLQ8NI51 663 aaPredicted RBP12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 FAM151AQ8WW52 585 aa12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 WASF1Q92558 559 aa12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 C8orf76Q96K31 380 aa12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 CSRNP1Q96S65 589 aa12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 ZSCAN16Q9H4T2 348 aaPredicted RBP12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 MYOZ2Q9NPC6 264 aa12.47□□□□□ -0.41
ECHDC3-204ENST00000495787 IGKV6D-41A0A0C4DH26 115 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 TCP10L2B9ZVM9 353 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 PPFIA3O75145 1194 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 TOP1P11387 765 aaKnown RBP12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 AKR1B1P15121 316 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 KIF5BP33176 963 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 RESTQ13127 1097 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 PKN2Q16513 984 aaKnown RBP12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 SKOR2Q2VWA4 1001 aaPredicted RBP12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 PPP4R3BQ5MIZ7 849 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 RBM26Q5T8P6 1007 aaKnown RBP12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 NBPF11Q86T75 865 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 FAM83AQ86UY5 434 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 PNMA1Q8ND90 353 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 PHKBQ93100 1093 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 TMEM47Q9BQJ4 181 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 ALG1Q9BT22 464 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 SLC26A6Q9BXS9 759 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 RNF26Q9BY78 433 aaPredicted RBP12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 TRIM34Q9BYJ4 488 aa12.46□□□□□ -0.41
ECHDC3-204ENST00000495787 MYH4Q9Y623 1939 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 CLRN2A0PK11 232 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 WNT10BO00744 389 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 PRPF3O43395 683 aaKnown RBP12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 DEXIO95424 95 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 GNAQP50148 359 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 FOSBP53539 338 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 GRM4Q14833 912 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 KIF4BQ2VIQ3 1234 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 TATDN1Q6P1N9 297 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 TMTC3Q6ZXV5 915 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 FERMT3Q86UX7 667 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 FBXO18Q8NFZ0 1043 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 CEP95Q96GE4 821 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 DNAJC18Q9H819 358 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 LMBRD1Q9NUN5 540 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 MTMR4Q9NYA4 1195 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 STX8Q9UNK0 236 aa12.45□□□□□ -0.42
ECHDC3-204ENST00000495787 TRAK2O60296 914 aa12.44□□□□□ -0.42
ECHDC3-204ENST00000495787 AKAP17AQ02040 695 aaKnown RBP12.44□□□□□ -0.42
ECHDC3-204ENST00000495787 FUT2Q10981 343 aa12.44□□□□□ -0.42
ECHDC3-204ENST00000495787 CERKLQ49MI3 558 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms