RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 NUDT12Q9BQG2 462 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 CRISPLD2Q9H0B8 497 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 KANSL2Q9H9L4 492 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 ARHGEF10LQ9HCE6 1279 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 EPB41L4AQ9HCS5 686 aaPredicted RBP8.65□□□□□ -1.02
VPS52-221ENST00000495755 HOXC10Q9NYD6 342 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 BTBD7Q9P203 1132 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 STAP2Q9UGK3 403 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 PLXNB2O15031 1838 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 RANBP2P49792 3224 aaKnown RBP8.64□□□□□ -1.03
VPS52-221ENST00000495755 EEF2P13639 858 aaKnown RBP8.64□□□□□ -1.03
VPS52-221ENST00000495755 RASA1P20936 1047 aa8.64□□□□□ -1.03
VPS52-221ENST00000495755 CCNA1P78396 465 aa8.64□□□□□ -1.03
VPS52-221ENST00000495755 TRIM32Q13049 653 aa8.64□□□□□ -1.03
VPS52-221ENST00000495755 LRRFIP1Q32MZ4 808 aaKnown RBP8.64□□□□□ -1.03
VPS52-221ENST00000495755 ZMYM1Q5SVZ6 1142 aa8.64□□□□□ -1.03
VPS52-221ENST00000495755 MAP3K21Q5TCX8 1036 aa8.64□□□□□ -1.03
VPS52-221ENST00000495755 CCAR1Q8IX12 1150 aaKnown RBP8.64□□□□□ -1.03
VPS52-221ENST00000495755 TRMT44Q8IYL2 757 aaKnown RBP8.64□□□□□ -1.03
VPS52-221ENST00000495755 TRIB2Q92519 343 aa8.64□□□□□ -1.03
VPS52-221ENST00000495755 DEFB118Q96PH6 123 aa8.64□□□□□ -1.03
VPS52-221ENST00000495755 SEC62Q99442 399 aaKnown RBP8.64□□□□□ -1.03
VPS52-221ENST00000495755 FSD1Q9BTV5 496 aa8.64□□□□□ -1.03
VPS52-221ENST00000495755 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.64□□□□□ -1.03
VPS52-221ENST00000495755 SH2D4AQ9H788 454 aa8.64□□□□□ -1.03
VPS52-221ENST00000495755 VCPKMTQ9H867 229 aa8.64□□□□□ -1.03
VPS52-221ENST00000495755 ROBO3Q96MS0 1386 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 RPTORQ8N122 1335 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 SLC15A5A6NIM6 579 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 MINDY4BA8MYZ0 360 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 TFRCP02786 760 aaKnown RBP8.63□□□□□ -1.03
VPS52-221ENST00000495755 APPP05067 770 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 PTPREP23469 700 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 DSG3P32926 999 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 RGS2P41220 211 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 PDE1AP54750 535 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 MAP2K5Q13163 448 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 SMC5Q8IY18 1101 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 IFNL3Q8IZI9 196 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 SPICE1Q8N0Z3 855 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 TANGO6Q9C0B7 1094 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 HMX1Q9NP08 348 aaPredicted RBP8.63□□□□□ -1.03
VPS52-221ENST00000495755 ZBTB47Q9UFB7 747 aaPredicted RBP8.63□□□□□ -1.03
VPS52-221ENST00000495755 ADAMTS5Q9UNA0 930 aa8.63□□□□□ -1.03
VPS52-221ENST00000495755 RLFQ13129 1914 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 IGKV6D-41A0A0C4DH26 115 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 WDR46O15213 610 aaKnown RBP8.62□□□□□ -1.03
VPS52-221ENST00000495755 FOXP2O15409 715 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 FARP2O94887 1054 aaPredicted RBP8.62□□□□□ -1.03
VPS52-221ENST00000495755 SLC34A2O95436 690 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 IGHA2P01877 340 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 IGHDP01880 384 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 HOXC6P09630 235 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 PRKAR2AP13861 404 aaKnown RBP8.62□□□□□ -1.03
VPS52-221ENST00000495755 ZKSCAN1P17029 563 aaPredicted RBP8.62□□□□□ -1.03
VPS52-221ENST00000495755 TDO2P48775 406 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 CACNB2Q08289 660 aaPredicted RBP8.62□□□□□ -1.03
VPS52-221ENST00000495755 GRB14Q14449 540 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 CCL14Q16627 93 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 TICAM2Q86XR7 235 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 STK11IPQ8N1F8 1099 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 MB21D1Q8N884 522 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 SHCBP1Q8NEM2 672 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 EVI5LQ96CN4 794 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 APBA2Q99767 749 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 MOV10L1Q9BXT6 1211 aaKnown RBP8.62□□□□□ -1.03
VPS52-221ENST00000495755 NACAP1Q9BZK3 213 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 SPATC1LQ9H0A9 340 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 RWDD1Q9H446 243 aaPredicted RBP8.62□□□□□ -1.03
VPS52-221ENST00000495755 MKNK2Q9HBH9 465 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 NYAP2Q9P242 653 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 CEP290O15078 2479 aa8.62□□□□□ -1.03
VPS52-221ENST00000495755 F5H6K3 240 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 H0YGN5 161 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 STRNO43815 780 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 FLOT1O75955 427 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 ERCC3P19447 782 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 MNX1P50219 401 aaPredicted RBP8.61□□□□□ -1.03
VPS52-221ENST00000495755 ATP2B2Q01814 1243 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 KLRC3Q07444 240 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 ZNF444Q8N0Y2 327 aaPredicted RBP8.61□□□□□ -1.03
VPS52-221ENST00000495755 ANKLE1Q8NAG6 615 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 EXOC6Q8TAG9 804 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 DPF3Q92784 378 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 MKL1Q969V6 931 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 ATG4CQ96DT6 458 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 MROH8Q9H579 483 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 ZNF287Q9HBT7 754 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 CWC22Q9HCG8 908 aaKnown RBP8.61□□□□□ -1.03
VPS52-221ENST00000495755 GOPCQ9HD26 462 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 FBXO28Q9NVF7 368 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 FLRT1Q9NZU1 646 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 OGDHLQ9ULD0 1010 aa8.61□□□□□ -1.03
VPS52-221ENST00000495755 MYH8P13535 1937 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 GREB1LQ9C091 1923 aaPredicted RBP8.6□□□□□ -1.03
VPS52-221ENST00000495755 PRDM1O75626 825 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 NUCB1Q02818 461 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 PPARAQ07869 468 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 TMEM132BQ14DG7 1078 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 ALX1Q15699 326 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms