RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 SMCR8Q8TEV9 937 aaPredicted RBP23.66■■□□□ 1.38
LMO4-204ENST00000495705 ASCC2Q9H1I8 757 aaPredicted RBP23.66■■□□□ 1.38
LMO4-204ENST00000495705 CLIP2Q9UDT6 1046 aa23.66■■□□□ 1.38
LMO4-204ENST00000495705 ADGRA2Q96PE1 1338 aa23.65■■□□□ 1.38
LMO4-204ENST00000495705 USP17L15C9J2P7 530 aa23.65■■□□□ 1.38
LMO4-204ENST00000495705 USP17L13C9JLJ4 530 aa23.65■■□□□ 1.38
LMO4-204ENST00000495705 USP17L11C9JVI0 530 aa23.65■■□□□ 1.38
LMO4-204ENST00000495705 USP17L18D6R9N7 530 aa23.65■■□□□ 1.38
LMO4-204ENST00000495705 USP17L22D6RA61 530 aa23.65■■□□□ 1.38
LMO4-204ENST00000495705 USP17L17D6RBQ6 530 aa23.65■■□□□ 1.38
LMO4-204ENST00000495705 USP17L19D6RCP7 530 aa23.65■■□□□ 1.38
LMO4-204ENST00000495705 USP17L20D6RJB6 530 aa23.65■■□□□ 1.38
LMO4-204ENST00000495705 CYP2C8P10632 490 aa23.65■■□□□ 1.38
LMO4-204ENST00000495705 USP17L24Q0WX57 530 aa23.65■■□□□ 1.38
LMO4-204ENST00000495705 IL17RBQ9NRM6 502 aa23.65■■□□□ 1.38
LMO4-204ENST00000495705 STX8Q9UNK0 236 aa23.65■■□□□ 1.38
LMO4-204ENST00000495705 CASP8AP2Q9UKL3 1982 aa23.65■■□□□ 1.38
LMO4-204ENST00000495705 B4E1Z4 1266 aa23.64■■□□□ 1.37
LMO4-204ENST00000495705 WDR46O15213 610 aaKnown RBP23.64■■□□□ 1.37
LMO4-204ENST00000495705 KDM4AO75164 1064 aa23.64■■□□□ 1.37
LMO4-204ENST00000495705 NECTIN1Q15223 517 aa23.64■■□□□ 1.37
LMO4-204ENST00000495705 CCDC178Q5BJE1 867 aa23.64■■□□□ 1.37
LMO4-204ENST00000495705 RNF20Q5VTR2 975 aa23.64■■□□□ 1.37
LMO4-204ENST00000495705 IQCA1Q86XH1 822 aa23.64■■□□□ 1.37
LMO4-204ENST00000495705 RPAP3Q9H6T3 665 aaPredicted RBP23.64■■□□□ 1.37
LMO4-204ENST00000495705 NMT2O60551 498 aa23.63■■□□□ 1.37
LMO4-204ENST00000495705 FKTNO75072 461 aa23.63■■□□□ 1.37
LMO4-204ENST00000495705 NOVP48745 357 aa23.63■■□□□ 1.37
LMO4-204ENST00000495705 C17orf99Q6UX52 265 aa23.63■■□□□ 1.37
LMO4-204ENST00000495705 CATSPERGQ6ZRH7 1159 aa23.63■■□□□ 1.37
LMO4-204ENST00000495705 GMCL1P1Q8NEA9 526 aa23.63■■□□□ 1.37
LMO4-204ENST00000495705 GTF3C2Q8WUA4 911 aaPredicted RBP23.63■■□□□ 1.37
LMO4-204ENST00000495705 ZNF296Q8WUU4 475 aaPredicted RBP23.63■■□□□ 1.37
LMO4-204ENST00000495705 E7EWF7 191 aa23.62■■□□□ 1.37
LMO4-204ENST00000495705 SLC27A2O14975 620 aa23.62■■□□□ 1.37
LMO4-204ENST00000495705 GCLCP48506 637 aaPredicted RBP23.62■■□□□ 1.37
LMO4-204ENST00000495705 KIAA1755Q5JYT7 1200 aa23.62■■□□□ 1.37
LMO4-204ENST00000495705 CREB3L3Q68CJ9 461 aa23.62■■□□□ 1.37
LMO4-204ENST00000495705 RALYLQ86SE5 291 aaKnown RBP23.62■■□□□ 1.37
LMO4-204ENST00000495705 SPICE1Q8N0Z3 855 aa23.62■■□□□ 1.37
LMO4-204ENST00000495705 LRRC47Q8N1G4 583 aaKnown RBP23.62■■□□□ 1.37
LMO4-204ENST00000495705 NCOA7Q8NI08 942 aa23.62■■□□□ 1.37
LMO4-204ENST00000495705 TTC14Q96N46 770 aa23.62■■□□□ 1.37
LMO4-204ENST00000495705 GTF3C3Q9Y5Q9 886 aa23.62■■□□□ 1.37
LMO4-204ENST00000495705 F5H6K3 240 aa23.61■■□□□ 1.37
LMO4-204ENST00000495705 EPB41L2O43491 1005 aaKnown RBP23.61■■□□□ 1.37
LMO4-204ENST00000495705 RAD21O60216 631 aa23.61■■□□□ 1.37
LMO4-204ENST00000495705 SP3Q02447 781 aa23.61■■□□□ 1.37
LMO4-204ENST00000495705 KLRC3Q07444 240 aa23.61■■□□□ 1.37
LMO4-204ENST00000495705 TANGO6Q9C0B7 1094 aa23.61■■□□□ 1.37
LMO4-204ENST00000495705 CPA4Q9UI42 421 aa23.61■■□□□ 1.37
LMO4-204ENST00000495705 PARP14Q460N5 1801 aa23.61■■□□□ 1.37
LMO4-204ENST00000495705 NDUFB10O96000 172 aa23.6■■□□□ 1.37
LMO4-204ENST00000495705 BCRP11274 1271 aa23.6■■□□□ 1.37
LMO4-204ENST00000495705 TOP1P11387 765 aaKnown RBP23.6■■□□□ 1.37
LMO4-204ENST00000495705 HERVK_113P62684 666 aa23.6■■□□□ 1.37
LMO4-204ENST00000495705 NKX2-3Q8TAU0 364 aa23.6■■□□□ 1.37
LMO4-204ENST00000495705 ERO1AQ96HE7 468 aa23.6■■□□□ 1.37
LMO4-204ENST00000495705 P2RX7Q99572 595 aaKnown RBP23.6■■□□□ 1.37
LMO4-204ENST00000495705 ZSWIM5Q9P217 1185 aa23.6■■□□□ 1.37
LMO4-204ENST00000495705 TAF6LQ9Y6J9 622 aa23.6■■□□□ 1.37
LMO4-204ENST00000495705 EIF5BO60841 1220 aaKnown RBP23.59■■□□□ 1.37
LMO4-204ENST00000495705 STOX1Q6ZVD7 989 aa23.59■■□□□ 1.37
LMO4-204ENST00000495705 DGKHQ86XP1 1220 aa23.59■■□□□ 1.37
LMO4-204ENST00000495705 ZSCAN10Q96SZ4 725 aaPredicted RBP23.59■■□□□ 1.37
LMO4-204ENST00000495705 UBAC1Q9BSL1 405 aa23.59■■□□□ 1.37
LMO4-204ENST00000495705 MYPNQ86TC9 1320 aa23.59■■□□□ 1.37
LMO4-204ENST00000495705 ZKSCAN1P17029 563 aaPredicted RBP23.58■■□□□ 1.37
LMO4-204ENST00000495705 COG2Q14746 738 aa23.58■■□□□ 1.37
LMO4-204ENST00000495705 FAM110CQ1W6H9 321 aa23.58■■□□□ 1.37
LMO4-204ENST00000495705 ZKSCAN3Q9BRR0 538 aa23.58■■□□□ 1.37
LMO4-204ENST00000495705 HOXC10Q9NYD6 342 aa23.58■■□□□ 1.37
LMO4-204ENST00000495705 RLFQ13129 1914 aa23.58■■□□□ 1.37
LMO4-204ENST00000495705 TNKSO95271 1327 aa23.58■■□□□ 1.36
LMO4-204ENST00000495705 FAM83BQ5T0W9 1011 aa23.57■■□□□ 1.36
LMO4-204ENST00000495705 SLFN13Q68D06 897 aa23.57■■□□□ 1.36
LMO4-204ENST00000495705 RCSD1Q6JBY9 416 aa23.57■■□□□ 1.36
LMO4-204ENST00000495705 LBX2Q6XYB7 198 aa23.57■■□□□ 1.36
LMO4-204ENST00000495705 GMCL1Q96IK5 515 aa23.57■■□□□ 1.36
LMO4-204ENST00000495705 TMEM47Q9BQJ4 181 aa23.57■■□□□ 1.36
LMO4-204ENST00000495705 A0A0G2JMZ2 1700 aa23.56■■□□□ 1.36
LMO4-204ENST00000495705 SPDYE16A6NNV3 312 aaPredicted RBP23.56■■□□□ 1.36
LMO4-204ENST00000495705 FLOT1O75955 427 aa23.56■■□□□ 1.36
LMO4-204ENST00000495705 KIF22Q14807 665 aa23.56■■□□□ 1.36
LMO4-204ENST00000495705 ARHGEF6Q15052 776 aa23.56■■□□□ 1.36
LMO4-204ENST00000495705 CYB5R4Q7L1T6 521 aa23.56■■□□□ 1.36
LMO4-204ENST00000495705 MB21D2Q8IYB1 491 aaPredicted RBP23.56■■□□□ 1.36
LMO4-204ENST00000495705 ANKRD13CQ8N6S4 541 aa23.56■■□□□ 1.36
LMO4-204ENST00000495705 ANKS1AQ92625 1134 aa23.56■■□□□ 1.36
LMO4-204ENST00000495705 MORF4L1Q9UBU8 362 aa23.56■■□□□ 1.36
LMO4-204ENST00000495705 LACTBP83111 547 aaPredicted RBP23.55■■□□□ 1.36
LMO4-204ENST00000495705 KRT32Q14532 448 aa23.55■■□□□ 1.36
LMO4-204ENST00000495705 SART3Q15020 963 aaKnown RBP23.55■■□□□ 1.36
LMO4-204ENST00000495705 TSGA10IPQ3SY00 556 aa23.55■■□□□ 1.36
LMO4-204ENST00000495705 ENAHQ8N8S7 591 aaPredicted RBP23.55■■□□□ 1.36
LMO4-204ENST00000495705 MGAMO43451 1857 aa23.54■■□□□ 1.36
LMO4-204ENST00000495705 ERICH2A1L162 156 aa23.54■■□□□ 1.36
LMO4-204ENST00000495705 BMP3P12645 472 aa23.54■■□□□ 1.36
LMO4-204ENST00000495705 DSG3P32926 999 aa23.54■■□□□ 1.36
LMO4-204ENST00000495705 HSPA4P34932 840 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms