RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 SPTY2D1Q68D10 685 aaPredicted RBP10.04□□□□□ -0.8
EPHA4-213ENST00000495693 STOX1Q6ZVD7 989 aa10.04□□□□□ -0.8
EPHA4-213ENST00000495693 MB21D2Q8IYB1 491 aaPredicted RBP10.04□□□□□ -0.8
EPHA4-213ENST00000495693 SYNE4Q8N205 404 aa10.04□□□□□ -0.8
EPHA4-213ENST00000495693 NSUN7Q8NE18 718 aaKnown RBP10.04□□□□□ -0.8
EPHA4-213ENST00000495693 ZNF775Q96BV0 537 aaPredicted RBP10.04□□□□□ -0.8
EPHA4-213ENST00000495693 SPATA32Q96LK8 384 aa10.04□□□□□ -0.8
EPHA4-213ENST00000495693 STRBPQ96SI9 672 aaKnown RBP10.04□□□□□ -0.8
EPHA4-213ENST00000495693 DDX19AQ9NUU7 478 aaKnown RBP10.04□□□□□ -0.8
EPHA4-213ENST00000495693 DOLKQ9UPQ8 538 aa10.04□□□□□ -0.8
EPHA4-213ENST00000495693 TCRBV5S4A2TA0A5A2 114 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 FAM177BA6PVY3 158 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 POM121CA8CG34 1229 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 CTAGE5O15320 804 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 SLC3A2P08195 630 aaKnown RBP10.03□□□□□ -0.8
EPHA4-213ENST00000495693 C4BP0C0L5 1744 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 PDIA3P30101 505 aaKnown RBP10.03□□□□□ -0.8
EPHA4-213ENST00000495693 LIFRP42702 1097 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 TDO2P48775 406 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 RPS8P62241 208 aaKnown RBP10.03□□□□□ -0.8
EPHA4-213ENST00000495693 RELBQ01201 579 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 ST3GAL1Q11201 340 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 FAM196AQ6ZSG2 479 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 CDC37L1Q7L3B6 337 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 TMC4Q7Z404 712 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 CYP2U1Q7Z449 544 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 BRAPQ7Z569 592 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 MAGEB6Q8N7X4 407 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 STAG1Q8WVM7 1258 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 PIH1D3Q9NQM4 214 aaKnown RBP10.03□□□□□ -0.8
EPHA4-213ENST00000495693 TMEM63CQ9P1W3 806 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 CNPY2Q9Y2B0 182 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 SALL1Q9NSC2 1324 aa10.03□□□□□ -0.8
EPHA4-213ENST00000495693 NID2Q14112 1375 aa10.02□□□□□ -0.8
EPHA4-213ENST00000495693 KLF18A0A0U1RQI7 1052 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 SYCE3A1L190 88 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 TTLL8A6PVC2 850 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 GOLGA8BA8MQT2 603 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 MYCP01106 439 aaPredicted RBP10.02□□□□□ -0.81
EPHA4-213ENST00000495693 CCDC192P0DO97 292 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 ST5P78524 1137 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 DNM1Q05193 864 aaKnown RBP10.02□□□□□ -0.81
EPHA4-213ENST00000495693 APOBRQ0VD83 1088 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 USP4Q13107 963 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 TBC1D9BQ66K14 1250 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 MFSD6Q6ZSS7 791 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 SGMS1Q86VZ5 419 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 NPAS3Q8IXF0 933 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 IFNL3Q8IZI9 196 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 ADAMTS19Q8TE59 1207 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 TCEANC2Q96MN5 208 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 PPP1R9BQ96SB3 815 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 SEC31BQ9NQW1 1179 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 NAP1L2Q9ULW6 460 aaPredicted RBP10.02□□□□□ -0.81
EPHA4-213ENST00000495693 LEMD3Q9Y2U8 911 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 AFF2P51816 1311 aa10.02□□□□□ -0.81
EPHA4-213ENST00000495693 MAST2Q6P0Q8 1798 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 TAF1LQ8IZX4 1826 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 CCDC69A6NI79 296 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 LZTS3O60299 673 aaPredicted RBP10.01□□□□□ -0.81
EPHA4-213ENST00000495693 MBD4O95243 580 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 METAP2P50579 478 aaKnown RBP eCLIP10.01□□□□□ -0.81
EPHA4-213ENST00000495693 TRIM29Q14134 588 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 AKNAD1Q5T1N1 836 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 AMOTL1Q8IY63 956 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 PLPP7Q8NBV4 271 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 C8orf76Q96K31 380 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 BRIP1Q9BX63 1249 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 RAI14Q9P0K7 980 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 DNMT3LQ9UJW3 386 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 ANAPC4Q9UJX5 808 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 WWC3Q9ULE0 1092 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 MINPP1Q9UNW1 487 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 SLC4A4Q9Y6R1 1079 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 STK36Q9NRP7 1315 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 A0A1B0GUL6 1792 aa10.01□□□□□ -0.81
EPHA4-213ENST00000495693 SH2B2O14492 632 aaPredicted RBP10□□□□□ -0.81
EPHA4-213ENST00000495693 ZBTB43O43298 467 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 MAN1A2O60476 641 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 GNRH1P01148 92 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 CALM1P0DP23 149 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 CALM2P0DP24 149 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 CALM3P0DP25 149 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 XBP1P17861 261 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 CYP7A1P22680 504 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 HIBADHP31937 336 aaKnown RBP10□□□□□ -0.81
EPHA4-213ENST00000495693 GSTO1P78417 241 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 RESTQ13127 1097 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 GRAPQ13588 217 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 MAP3K11Q16584 847 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10□□□□□ -0.81
EPHA4-213ENST00000495693 CCDC178Q5BJE1 867 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 PI16Q6UXB8 463 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 NFXL1Q6ZNB6 911 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 TRIM22Q8IYM9 498 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 JMYQ8N9B5 988 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 CNBD1Q8NA66 436 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 WDR66Q8TBY9 1149 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 GRAPLQ8TC17 118 aaPredicted RBP10□□□□□ -0.81
EPHA4-213ENST00000495693 KCNG4Q8TDN1 519 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms