RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 UBE2OQ9C0C9 1292 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-206ENST00000495680 GLRX3O76003 335 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-206ENST00000495680 AKR1B1P15121 316 aa14.59□□□□□ -0.07
SHROOM1-206ENST00000495680 MDM2Q00987 491 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-206ENST00000495680 MFSD14CQ5VZR4 134 aa14.59□□□□□ -0.07
SHROOM1-206ENST00000495680 TDHQ8IZJ6 230 aa14.59□□□□□ -0.07
SHROOM1-206ENST00000495680 CLASRPQ8N2M8 674 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-206ENST00000495680 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.59□□□□□ -0.07
SHROOM1-206ENST00000495680 KIF1BPQ96EK5 621 aa14.59□□□□□ -0.07
SHROOM1-206ENST00000495680 TANGO6Q9C0B7 1094 aa14.59□□□□□ -0.07
SHROOM1-206ENST00000495680 SENP6Q9GZR1 1112 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-206ENST00000495680 DDX20Q9UHI6 824 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-206ENST00000495680 COG6Q9Y2V7 657 aa14.59□□□□□ -0.07
SHROOM1-206ENST00000495680 ZBED9Q6R2W3 1325 aa14.59□□□□□ -0.07
SHROOM1-206ENST00000495680 MBD4O95243 580 aa14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 IFIT2P09913 472 aaKnown RBP14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 CNGA1P29973 690 aa14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 ATN1P54259 1190 aaPredicted RBP14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 ATP2B2Q01814 1243 aa14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 COG2Q14746 738 aa14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 LRIT3Q3SXY7 679 aa14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 HSP90AB4PQ58FF6 505 aa14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 ANO1Q5XXA6 986 aa14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 SPICE1Q8N0Z3 855 aa14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 DEFB123Q8N688 67 aa14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 SLC17A8Q8NDX2 589 aa14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 BOLA2Q9H3K6 86 aa14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 ZBTB40Q9NUA8 1239 aa14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 IVNS1ABPQ9Y6Y0 642 aa14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 MYH8P13535 1937 aa14.58□□□□□ -0.08
SHROOM1-206ENST00000495680 PARP14Q460N5 1801 aa14.57□□□□□ -0.08
SHROOM1-206ENST00000495680 ZNF236Q9UL36 1845 aa14.57□□□□□ -0.08
SHROOM1-206ENST00000495680 COBLO75128 1261 aa14.57□□□□□ -0.08
SHROOM1-206ENST00000495680 CYBAP13498 195 aa14.57□□□□□ -0.08
SHROOM1-206ENST00000495680 ERCC3P19447 782 aa14.57□□□□□ -0.08
SHROOM1-206ENST00000495680 ADORA2AP29274 412 aa14.57□□□□□ -0.08
SHROOM1-206ENST00000495680 ADD2P35612 726 aa14.57□□□□□ -0.08
SHROOM1-206ENST00000495680 TMEM179Q6ZVK1 233 aa14.57□□□□□ -0.08
SHROOM1-206ENST00000495680 SPATC1LQ9H0A9 340 aa14.57□□□□□ -0.08
SHROOM1-206ENST00000495680 PAG1Q9NWQ8 432 aa14.57□□□□□ -0.08
SHROOM1-206ENST00000495680 PRAMEF19Q5SWL8 479 aa14.56□□□□□ -0.08
SHROOM1-206ENST00000495680 GJC2Q5T442 439 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-206ENST00000495680 RPAP2Q8IXW5 612 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-206ENST00000495680 LPAR1Q92633 364 aa14.56□□□□□ -0.08
SHROOM1-206ENST00000495680 ATG4CQ96DT6 458 aa14.56□□□□□ -0.08
SHROOM1-206ENST00000495680 DNAH12Q6ZR08 3092 aa14.56□□□□□ -0.08
SHROOM1-206ENST00000495680 DSG3P32926 999 aa14.55□□□□□ -0.08
SHROOM1-206ENST00000495680 ICA1Q05084 483 aa14.55□□□□□ -0.08
SHROOM1-206ENST00000495680 PLS1Q14651 629 aa14.55□□□□□ -0.08
SHROOM1-206ENST00000495680 GPR153Q6NV75 609 aa14.55□□□□□ -0.08
SHROOM1-206ENST00000495680 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-206ENST00000495680 DPP9Q86TI2 863 aa14.55□□□□□ -0.08
SHROOM1-206ENST00000495680 HOXC10Q9NYD6 342 aa14.55□□□□□ -0.08
SHROOM1-206ENST00000495680 SWAP70Q9UH65 585 aa14.55□□□□□ -0.08
SHROOM1-206ENST00000495680 TMX2Q9Y320 296 aa14.55□□□□□ -0.08
SHROOM1-206ENST00000495680 COL11A1P12107 1806 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-206ENST00000495680 LTBP2Q14767 1821 aa14.55□□□□□ -0.08
SHROOM1-206ENST00000495680 MYH7P12883 1935 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 USP17L12C9JPN9 530 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 USP17L21D6R901 530 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 DNM1LO00429 736 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 FLOT1O75955 427 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 ATP5JP18859 108 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 CDK8P49336 464 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 TMEM132BQ14DG7 1078 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 C12orf60Q5U649 245 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 OLFML2BQ68BL8 750 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 NCAPG2Q86XI2 1143 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 SHCBP1Q8NEM2 672 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 HAUS7Q99871 368 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 VCPKMTQ9H867 229 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 FBXO28Q9NVF7 368 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 MTMR10Q9NXD2 777 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 DDX19BQ9UMR2 479 aa14.54□□□□□ -0.08
SHROOM1-206ENST00000495680 ZNFX1Q9P2E3 1918 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-206ENST00000495680 DLL1O00548 723 aa14.53□□□□□ -0.08
SHROOM1-206ENST00000495680 STRNO43815 780 aa14.53□□□□□ -0.08
SHROOM1-206ENST00000495680 SMARCA5O60264 1052 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-206ENST00000495680 MSCO60682 206 aa14.53□□□□□ -0.08
SHROOM1-206ENST00000495680 RAB11FIP3O75154 756 aa14.53□□□□□ -0.08
SHROOM1-206ENST00000495680 HMMRO75330 724 aa14.53□□□□□ -0.08
SHROOM1-206ENST00000495680 EEF2P13639 858 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-206ENST00000495680 RTP1P59025 263 aa14.53□□□□□ -0.08
SHROOM1-206ENST00000495680 DIEXFQ68CQ4 756 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-206ENST00000495680 PUS7LQ9H0K6 701 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-206ENST00000495680 ARHGEF10LQ9HCE6 1279 aa14.53□□□□□ -0.08
SHROOM1-206ENST00000495680 ATP8A2Q9NTI2 1148 aa14.53□□□□□ -0.08
SHROOM1-206ENST00000495680 MYCNP04198 464 aaPredicted RBP14.52□□□□□ -0.09
SHROOM1-206ENST00000495680 C20orf194Q5TEA3 1177 aa14.52□□□□□ -0.09
SHROOM1-206ENST00000495680 C16orf86Q6ZW13 317 aa14.52□□□□□ -0.09
SHROOM1-206ENST00000495680 MAML3Q96JK9 1138 aa14.52□□□□□ -0.09
SHROOM1-206ENST00000495680 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.52□□□□□ -0.09
SHROOM1-206ENST00000495680 MROH8Q9H579 483 aa14.52□□□□□ -0.09
SHROOM1-206ENST00000495680 SLC4A4Q9Y6R1 1079 aa14.52□□□□□ -0.09
SHROOM1-206ENST00000495680 SMCHD1A6NHR9 2005 aa14.52□□□□□ -0.09
SHROOM1-206ENST00000495680 WDR46O15213 610 aaKnown RBP14.51□□□□□ -0.09
SHROOM1-206ENST00000495680 SEPT4O43236 478 aa14.51□□□□□ -0.09
SHROOM1-206ENST00000495680 PGK2P07205 417 aa14.51□□□□□ -0.09
SHROOM1-206ENST00000495680 UBE3CQ15386 1083 aa14.51□□□□□ -0.09
SHROOM1-206ENST00000495680 FAM47AQ5JRC9 791 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms