RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 RALYLQ86SE5 291 aaKnown RBP14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 IQCA1Q86XH1 822 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 VCPKMTQ9H867 229 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 GTF3C3Q9Y5Q9 886 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 GREB1LQ9C091 1923 aaPredicted RBP14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 IGKV6D-41A0A0C4DH26 115 aa14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 B4E1Z4 1266 aa14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 KDM4AO75164 1064 aa14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 CYP2C8P10632 490 aa14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 VCAM1P19320 739 aa14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 HOXA7P31268 230 aaPredicted RBP14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 CCDC178Q5BJE1 867 aa14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 NOM1Q5C9Z4 860 aaKnown RBP14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 SIAH1Q8IUQ4 282 aa14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 SPICE1Q8N0Z3 855 aa14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 TANGO6Q9C0B7 1094 aa14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 ASCC2Q9H1I8 757 aaPredicted RBP14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 RPAP3Q9H6T3 665 aaPredicted RBP14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 PRDM10Q9NQV6 1147 aa14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 TACC3Q9Y6A5 838 aa14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 MYH4Q9Y623 1939 aa14.25□□□□□ -0.13
CSNK1E-213ENST00000495232 E7EWF7 191 aa14.24□□□□□ -0.13
CSNK1E-213ENST00000495232 WDR46O15213 610 aaKnown RBP14.24□□□□□ -0.13
CSNK1E-213ENST00000495232 NMT2O60551 498 aa14.24□□□□□ -0.13
CSNK1E-213ENST00000495232 EIF5BO60841 1220 aaKnown RBP14.24□□□□□ -0.13
CSNK1E-213ENST00000495232 FKTNO75072 461 aa14.24□□□□□ -0.13
CSNK1E-213ENST00000495232 NCOA7Q8NI08 942 aa14.24□□□□□ -0.13
CSNK1E-213ENST00000495232 ZNF296Q8WUU4 475 aaPredicted RBP14.24□□□□□ -0.13
CSNK1E-213ENST00000495232 MKL1Q969V6 931 aa14.24□□□□□ -0.13
CSNK1E-213ENST00000495232 UBAC1Q9BSL1 405 aa14.24□□□□□ -0.13
CSNK1E-213ENST00000495232 R3HDMLQ9H3Y0 253 aa14.24□□□□□ -0.13
CSNK1E-213ENST00000495232 TCP11L1Q9NUJ3 509 aa14.24□□□□□ -0.13
CSNK1E-213ENST00000495232 SYNPO2Q9UMS6 1093 aa14.24□□□□□ -0.13
CSNK1E-213ENST00000495232 F5H6K3 240 aa14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 SLC27A2O14975 620 aa14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 ZKSCAN1P17029 563 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 GCLCP48506 637 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 SP3Q02447 781 aa14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 KLRC3Q07444 240 aa14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 KIF22Q14807 665 aa14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 ARHGEF6Q15052 776 aa14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 NECTIN1Q15223 517 aa14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 CREB3L3Q68CJ9 461 aa14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 CATSPERGQ6ZRH7 1159 aa14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 LRRC47Q8N1G4 583 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 GTF3C2Q8WUA4 911 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 TTC14Q96N46 770 aa14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 IL17RBQ9NRM6 502 aa14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 ZSWIM5Q9P217 1185 aa14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 CPA4Q9UI42 421 aa14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 ISY1Q9ULR0 285 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-213ENST00000495232 ERICH2A1L162 156 aa14.22□□□□□ -0.13
CSNK1E-213ENST00000495232 HERVK_113P62684 666 aa14.22□□□□□ -0.13
CSNK1E-213ENST00000495232 SART3Q15020 963 aaKnown RBP14.22□□□□□ -0.13
CSNK1E-213ENST00000495232 GMCL1P1Q8NEA9 526 aa14.22□□□□□ -0.13
CSNK1E-213ENST00000495232 ERO1AQ96HE7 468 aa14.22□□□□□ -0.13
CSNK1E-213ENST00000495232 ZSCAN10Q96SZ4 725 aaPredicted RBP14.22□□□□□ -0.13
CSNK1E-213ENST00000495232 P2RX7Q99572 595 aaKnown RBP14.22□□□□□ -0.13
CSNK1E-213ENST00000495232 ZKSCAN3Q9BRR0 538 aa14.22□□□□□ -0.13
CSNK1E-213ENST00000495232 HOXC10Q9NYD6 342 aa14.22□□□□□ -0.13
CSNK1E-213ENST00000495232 FLOT1O75955 427 aa14.21□□□□□ -0.13
CSNK1E-213ENST00000495232 NDUFB10O96000 172 aa14.21□□□□□ -0.13
CSNK1E-213ENST00000495232 TOP1P11387 765 aaKnown RBP14.21□□□□□ -0.13
CSNK1E-213ENST00000495232 COG2Q14746 738 aa14.21□□□□□ -0.13
CSNK1E-213ENST00000495232 KIAA1755Q5JYT7 1200 aa14.21□□□□□ -0.13
CSNK1E-213ENST00000495232 FAM83BQ5T0W9 1011 aa14.21□□□□□ -0.13
CSNK1E-213ENST00000495232 SLFN13Q68D06 897 aa14.21□□□□□ -0.13
CSNK1E-213ENST00000495232 SAMD1Q6SPF0 538 aaPredicted RBP14.21□□□□□ -0.13
CSNK1E-213ENST00000495232 C17orf99Q6UX52 265 aa14.21□□□□□ -0.13
CSNK1E-213ENST00000495232 ANKRD13CQ8N6S4 541 aa14.21□□□□□ -0.13
CSNK1E-213ENST00000495232 MTMR7Q9Y216 660 aa14.21□□□□□ -0.13
CSNK1E-213ENST00000495232 CASP8AP2Q9UKL3 1982 aa14.21□□□□□ -0.13
CSNK1E-213ENST00000495232 EPB41L2O43491 1005 aaKnown RBP14.2□□□□□ -0.14
CSNK1E-213ENST00000495232 MCCP23508 829 aa14.2□□□□□ -0.14
CSNK1E-213ENST00000495232 SLC1A4P43007 532 aa14.2□□□□□ -0.14
CSNK1E-213ENST00000495232 KRT32Q14532 448 aa14.2□□□□□ -0.14
CSNK1E-213ENST00000495232 DGKHQ86XP1 1220 aa14.2□□□□□ -0.14
CSNK1E-213ENST00000495232 CCAR1Q8IX12 1150 aaKnown RBP14.2□□□□□ -0.14
CSNK1E-213ENST00000495232 TMEM47Q9BQJ4 181 aa14.2□□□□□ -0.14
CSNK1E-213ENST00000495232 PAGR1Q9BTK6 254 aa14.2□□□□□ -0.14
CSNK1E-213ENST00000495232 KAT14Q9H8E8 782 aa14.2□□□□□ -0.14
CSNK1E-213ENST00000495232 TNKSO95271 1327 aa14.19□□□□□ -0.14
CSNK1E-213ENST00000495232 ADGRA2Q96PE1 1338 aa14.19□□□□□ -0.14
CSNK1E-213ENST00000495232 IFIT3O14879 490 aaKnown RBP14.19□□□□□ -0.14
CSNK1E-213ENST00000495232 BMP3P12645 472 aa14.19□□□□□ -0.14
CSNK1E-213ENST00000495232 MCM5P33992 734 aa14.19□□□□□ -0.14
CSNK1E-213ENST00000495232 NOVP48745 357 aa14.19□□□□□ -0.14
CSNK1E-213ENST00000495232 IKQ13123 557 aaPredicted RBP14.19□□□□□ -0.14
CSNK1E-213ENST00000495232 FAM110CQ1W6H9 321 aa14.19□□□□□ -0.14
CSNK1E-213ENST00000495232 IFIT1BQ5T764 474 aaKnown RBP14.19□□□□□ -0.14
CSNK1E-213ENST00000495232 CD99L2Q8TCZ2 262 aa14.19□□□□□ -0.14
CSNK1E-213ENST00000495232 CHMP4CQ96CF2 233 aa14.19□□□□□ -0.14
CSNK1E-213ENST00000495232 NUP88Q99567 741 aaPredicted RBP14.19□□□□□ -0.14
CSNK1E-213ENST00000495232 CTDP1Q9Y5B0 961 aaPredicted RBP14.19□□□□□ -0.14
CSNK1E-213ENST00000495232 TAF6LQ9Y6J9 622 aa14.19□□□□□ -0.14
CSNK1E-213ENST00000495232 ECM2O94769 699 aaPredicted RBP14.18□□□□□ -0.14
CSNK1E-213ENST00000495232 FMNL1O95466 1100 aaPredicted RBP14.18□□□□□ -0.14
CSNK1E-213ENST00000495232 BCRP11274 1271 aa14.18□□□□□ -0.14
CSNK1E-213ENST00000495232 LACTBP83111 547 aaPredicted RBP14.18□□□□□ -0.14
CSNK1E-213ENST00000495232 CCDC96Q2M329 555 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms