RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 KIFC2Q96AC6 838 aa16.9■□□□□ 0.3
UBXN11-215ENST00000494942 MYH2Q9UKX2 1941 aa16.89■□□□□ 0.29
UBXN11-215ENST00000494942 LOC102724428A0A0B4J2F2 783 aa16.89■□□□□ 0.29
UBXN11-215ENST00000494942 PLEKHA8P1O95397 391 aa16.89■□□□□ 0.29
UBXN11-215ENST00000494942 PBX1P40424 430 aa16.89■□□□□ 0.29
UBXN11-215ENST00000494942 GYG1P46976 350 aa16.89■□□□□ 0.29
UBXN11-215ENST00000494942 SIK1P57059 783 aa16.89■□□□□ 0.29
UBXN11-215ENST00000494942 ATP2C1P98194 919 aaPredicted RBP16.89■□□□□ 0.29
UBXN11-215ENST00000494942 PPP2R3AQ06190 1150 aa16.89■□□□□ 0.29
UBXN11-215ENST00000494942 CCDC51Q96ER9 411 aa16.89■□□□□ 0.29
UBXN11-215ENST00000494942 TEX33O43247 280 aa16.88■□□□□ 0.29
UBXN11-215ENST00000494942 PRDM1O75626 825 aa16.88■□□□□ 0.29
UBXN11-215ENST00000494942 CD44P16070 742 aaKnown RBP16.88■□□□□ 0.29
UBXN11-215ENST00000494942 TAF3Q5VWG9 929 aa16.88■□□□□ 0.29
UBXN11-215ENST00000494942 KLHL10Q6JEL2 608 aa16.88■□□□□ 0.29
UBXN11-215ENST00000494942 IQUBQ8NA54 791 aa16.88■□□□□ 0.29
UBXN11-215ENST00000494942 BSDC1Q9NW68 430 aaPredicted RBP16.88■□□□□ 0.29
UBXN11-215ENST00000494942 ITIH6Q6UXX5 1313 aa16.88■□□□□ 0.29
UBXN11-215ENST00000494942 PPP1R3GB7ZBB8 358 aa16.88■□□□□ 0.29
UBXN11-215ENST00000494942 ZNF174Q15697 407 aa16.88■□□□□ 0.29
UBXN11-215ENST00000494942 CTR9Q6PD62 1173 aa16.88■□□□□ 0.29
UBXN11-215ENST00000494942 CNGA4Q8IV77 575 aa16.88■□□□□ 0.29
UBXN11-215ENST00000494942 CTCFLQ8NI51 663 aaPredicted RBP16.88■□□□□ 0.29
UBXN11-215ENST00000494942 ORC4O43929 436 aa16.87■□□□□ 0.29
UBXN11-215ENST00000494942 RBL2Q08999 1139 aa16.87■□□□□ 0.29
UBXN11-215ENST00000494942 PTGDRQ13258 359 aa16.87■□□□□ 0.29
UBXN11-215ENST00000494942 NPY5RQ15761 445 aa16.87■□□□□ 0.29
UBXN11-215ENST00000494942 TMED8Q6PL24 325 aaPredicted RBP16.87■□□□□ 0.29
UBXN11-215ENST00000494942 CLEC4GQ6UXB4 293 aa16.87■□□□□ 0.29
UBXN11-215ENST00000494942 RSRC2Q7L4I2 434 aaKnown RBP16.87■□□□□ 0.29
UBXN11-215ENST00000494942 RABGGTAQ92696 567 aa16.87■□□□□ 0.29
UBXN11-215ENST00000494942 ADGRG1Q9Y653 693 aa16.87■□□□□ 0.29
UBXN11-215ENST00000494942 COL1A1P02452 1464 aaPredicted RBP16.87■□□□□ 0.29
UBXN11-215ENST00000494942 CNTNAP5Q8WYK1 1306 aa16.87■□□□□ 0.29
UBXN11-215ENST00000494942 STX17P56962 302 aa16.87■□□□□ 0.29
UBXN11-215ENST00000494942 DYNLL1P63167 89 aaKnown RBP16.87■□□□□ 0.29
UBXN11-215ENST00000494942 TUBB2AQ13885 445 aa16.87■□□□□ 0.29
UBXN11-215ENST00000494942 SF3B3Q15393 1217 aaKnown RBP16.87■□□□□ 0.29
UBXN11-215ENST00000494942 CCDC12Q8WUD4 166 aaPredicted RBP16.87■□□□□ 0.29
UBXN11-215ENST00000494942 DESI2Q9BSY9 194 aa16.87■□□□□ 0.29
UBXN11-215ENST00000494942 TUBB2BQ9BVA1 445 aa16.87■□□□□ 0.29
UBXN11-215ENST00000494942 hCG_1642624A0A1W2PR95 340 aa16.86■□□□□ 0.29
UBXN11-215ENST00000494942 SOWAHDA6NJG2 315 aa16.86■□□□□ 0.29
UBXN11-215ENST00000494942 MFAP3LO75121 409 aa16.86■□□□□ 0.29
UBXN11-215ENST00000494942 JAKMIP3Q5VZ66 844 aa16.86■□□□□ 0.29
UBXN11-215ENST00000494942 GOLGA1Q92805 767 aa16.86■□□□□ 0.29
UBXN11-215ENST00000494942 RGS17Q9UGC6 210 aaPredicted RBP16.86■□□□□ 0.29
UBXN11-215ENST00000494942 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.86■□□□□ 0.29
UBXN11-215ENST00000494942 BAZ2AQ9UIF9 1905 aaKnown RBP16.86■□□□□ 0.29
UBXN11-215ENST00000494942 A0A1B0GUL6 1792 aa16.86■□□□□ 0.29
UBXN11-215ENST00000494942 CYP2D7A0A087X1C5 515 aa16.86■□□□□ 0.29
UBXN11-215ENST00000494942 SMIM22K7EJ46 135 aa16.86■□□□□ 0.29
UBXN11-215ENST00000494942 PLA2G4AP47712 749 aa16.86■□□□□ 0.29
UBXN11-215ENST00000494942 SPAG1Q07617 926 aa16.86■□□□□ 0.29
UBXN11-215ENST00000494942 MRPL44Q9H9J2 332 aaKnown RBP16.86■□□□□ 0.29
UBXN11-215ENST00000494942 LRRC10BA6NIK2 292 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 USP17L12C9JPN9 530 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 USP17L21D6R901 530 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 KIF5CO60282 957 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 SCG2P13521 617 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 FECHP22830 423 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 ITPK1Q13572 414 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 MTF1Q14872 753 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 KARSQ15046 597 aaKnown RBP16.85■□□□□ 0.29
UBXN11-215ENST00000494942 VPS72Q15906 364 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 E2F4Q16254 413 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 DDB1Q16531 1140 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 RASGRP2Q7LDG7 609 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 LIMA1Q9UHB6 759 aaKnown RBP16.85■□□□□ 0.29
UBXN11-215ENST00000494942 RWDD2AQ9UIY3 292 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 PDS5AQ29RF7 1337 aaKnown RBP16.85■□□□□ 0.29
UBXN11-215ENST00000494942 WNT7AO00755 349 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 CASP1P29466 404 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 NLRP5P59047 1200 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 TUBB4BP68371 445 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 ZNF772Q68DY9 489 aaPredicted RBP16.85■□□□□ 0.29
UBXN11-215ENST00000494942 RAD9BQ6WBX8 426 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 SRBD1Q8N5C6 995 aaKnown RBP16.85■□□□□ 0.29
UBXN11-215ENST00000494942 ANKRD20A12PQ8NF67 263 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 FAM84BQ96KN1 310 aaPredicted RBP16.85■□□□□ 0.29
UBXN11-215ENST00000494942 QTRT2Q9H974 415 aaKnown RBP16.85■□□□□ 0.29
UBXN11-215ENST00000494942 RMND1Q9NWS8 449 aa16.85■□□□□ 0.29
UBXN11-215ENST00000494942 THRAP3Q9Y2W1 955 aaKnown RBP16.85■□□□□ 0.29
UBXN11-215ENST00000494942 SPATA31A5Q5VU36 1347 aa16.84■□□□□ 0.29
UBXN11-215ENST00000494942 SPATA31A7Q8IWB4 1347 aa16.84■□□□□ 0.29
UBXN11-215ENST00000494942 SCN7AQ01118 1682 aa16.84■□□□□ 0.29
UBXN11-215ENST00000494942 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
UBXN11-215ENST00000494942 PFKFB3Q16875 520 aaPredicted RBP16.84■□□□□ 0.29
UBXN11-215ENST00000494942 TEX35Q5T0J7 233 aa16.84■□□□□ 0.29
UBXN11-215ENST00000494942 ARL6IP4Q66PJ3 421 aaKnown RBP16.84■□□□□ 0.29
UBXN11-215ENST00000494942 CC2D1AQ6P1N0 951 aaPredicted RBP16.84■□□□□ 0.29
UBXN11-215ENST00000494942 CPLX3Q8WVH0 158 aa16.84■□□□□ 0.29
UBXN11-215ENST00000494942 CRNKL1Q9BZJ0 848 aaKnown RBP16.84■□□□□ 0.29
UBXN11-215ENST00000494942 ATP8A2Q9NTI2 1148 aa16.84■□□□□ 0.29
UBXN11-215ENST00000494942 TRPC5Q9UL62 973 aaPredicted RBP16.84■□□□□ 0.29
UBXN11-215ENST00000494942 MINPP1Q9UNW1 487 aa16.84■□□□□ 0.29
UBXN11-215ENST00000494942 TTF2Q9UNY4 1162 aaKnown RBP16.84■□□□□ 0.29
UBXN11-215ENST00000494942 CTNND2Q9UQB3 1225 aa16.84■□□□□ 0.29
UBXN11-215ENST00000494942 XDHP47989 1333 aa16.84■□□□□ 0.29
UBXN11-215ENST00000494942 SPATA31A1Q5TZJ5 1347 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms