RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 L1RE1Q9UN81 338 aa3.1□□□□□ -1.91
MDC1-208ENST00000494654 USP16Q9Y5T5 823 aa3.1□□□□□ -1.91
MDC1-208ENST00000494654 SNX14Q9Y5W7 946 aa3.1□□□□□ -1.91
MDC1-208ENST00000494654 RPS6KL1Q9Y6S9 549 aa3.1□□□□□ -1.91
MDC1-208ENST00000494654 CAPN7Q9Y6W3 813 aa3.1□□□□□ -1.91
MDC1-208ENST00000494654 NEDD4P46934 1319 aa3.1□□□□□ -1.91
MDC1-208ENST00000494654 RFX7Q2KHR2 1363 aa3.1□□□□□ -1.91
MDC1-208ENST00000494654 PHLPP1O60346 1717 aa3.1□□□□□ -1.91
MDC1-208ENST00000494654 TRPM3Q9HCF6 1732 aaPredicted RBP3.1□□□□□ -1.91
MDC1-208ENST00000494654 CDK5RAP2Q96SN8 1893 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 TANC1Q9C0D5 1861 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 LOXHD1Q8IVV2 1947 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 AKAP11Q9UKA4 1901 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 LRP5O75197 1615 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 LRP6O75581 1613 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 KAT6BQ8WYB5 2073 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 GOLGA6L7A0A1B0GV03 622 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 TTC24A2A3L6 582 aaPredicted RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 GOLGA8KD6RF30 607 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 IKBKBO14920 756 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 MEFVO15553 781 aaPredicted RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 PPFIA2O75334 1257 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 VAMP4O75379 141 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 WDHD1O75717 1129 aaPredicted RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 SYF2O95926 243 aaKnown RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 FESP07332 822 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 SETSIPP0DME0 302 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 MYBL2P10244 700 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 IMPDH2P12268 514 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 PECAM1P16284 738 aaPredicted RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 RXRBP28702 533 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 GCKP35557 465 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 ABL2P42684 1182 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 CCT5P48643 541 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 CCNHP51946 323 aaPredicted RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 SMTNP53814 917 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 RAB15P59190 212 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 FAM160A1Q05DH4 1040 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 VAC14Q08AM6 782 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 RESTQ13127 1097 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 OS9Q13438 667 aaPredicted RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 PDIA5Q14554 519 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 SNCBQ16143 134 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 NFE2L2Q16236 605 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 CAMK4Q16566 473 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 WHAMMP3Q1A5X7 153 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 CCDC38Q502W7 563 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 ATL3Q6DD88 541 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 Q6ZNB5 142 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 CCDC73Q6ZRK6 1079 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 TTLL7Q6ZT98 887 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 B4GALNT4Q76KP1 1039 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 UBE3BQ7Z3V4 1068 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 TAX1BP1Q86VP1 789 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 APLFQ8IW19 511 aaPredicted RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 CYP4X1Q8N118 509 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 FAM76AQ8TAV0 307 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 ADAMTS19Q8TE59 1207 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 PARD3BQ8TEW8 1205 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 CCDC12Q8WUD4 166 aaPredicted RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 TCP11Q8WWU5 503 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 DHX58Q96C10 678 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 RSRC1Q96IZ7 334 aaKnown RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 CLIC6Q96NY7 704 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 OSBPL9Q96SU4 736 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 PNKPQ96T60 521 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 C1QTNF2Q9BXJ5 285 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 XPO4Q9C0E2 1151 aaKnown RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 LSG1Q9H089 658 aaKnown RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 ALDH8A1Q9H2A2 487 aaPredicted RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 SUDS3Q9H7L9 328 aaPredicted RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 ZFAND3Q9H8U3 227 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 ABCB6Q9NP58 842 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 CDC23Q9UJX2 597 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 HPCAL4Q9UM19 191 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 PPP2R2CQ9Y2T4 447 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 UBR1Q8IWV7 1749 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 MAP3K15Q6ZN16 1313 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 SH3TC1Q8TE82 1336 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 USP42Q9H9J4 1324 aaKnown RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 RGPD3A6NKT7 1758 aaPredicted RBP3.09□□□□□ -1.91
MDC1-208ENST00000494654 RGPD4Q7Z3J3 1758 aa3.09□□□□□ -1.91
MDC1-208ENST00000494654 CARMIL3Q8ND23 1372 aa3.09□□□□□ -1.92
MDC1-208ENST00000494654 MED23Q9ULK4 1368 aa3.09□□□□□ -1.92
MDC1-208ENST00000494654 FER1L6Q2WGJ9 1857 aa3.09□□□□□ -1.92
MDC1-208ENST00000494654 NPATQ14207 1427 aa3.09□□□□□ -1.92
MDC1-208ENST00000494654 A2ML1A8K2U0 1454 aa3.09□□□□□ -1.92
MDC1-208ENST00000494654 SCN7AQ01118 1682 aa3.08□□□□□ -1.92
MDC1-208ENST00000494654 MAST2Q6P0Q8 1798 aa3.08□□□□□ -1.92
MDC1-208ENST00000494654 TARSL2A2RTX5 802 aaKnown RBP3.08□□□□□ -1.92
MDC1-208ENST00000494654 EME2A4GXA9 379 aaPredicted RBP3.08□□□□□ -1.92
MDC1-208ENST00000494654 GOLGA6CA6NDK9 693 aa3.08□□□□□ -1.92
MDC1-208ENST00000494654 LRRIQ3A6PVS8 624 aaPredicted RBP3.08□□□□□ -1.92
MDC1-208ENST00000494654 ANKRD65E5RJM6 399 aa3.08□□□□□ -1.92
MDC1-208ENST00000494654 MYO1FO00160 1098 aa3.08□□□□□ -1.92
MDC1-208ENST00000494654 NRG2O14511 850 aaPredicted RBP3.08□□□□□ -1.92
MDC1-208ENST00000494654 ABLIM1O14639 778 aa3.08□□□□□ -1.92
MDC1-208ENST00000494654 KIF3BO15066 747 aa3.08□□□□□ -1.92
MDC1-208ENST00000494654 STX10O60499 249 aa3.08□□□□□ -1.92
MDC1-208ENST00000494654 PFKFB2O60825 505 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms